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Items: 6

Select item 52065361.

Conservation of coevolving protein interfaces bridges prokaryote–eukaryote homologies in the twilight zone

Juan Rodriguez-Rivas, Simone Marsili, David Juan, Alfonso Valencia

Proc Natl Acad Sci U S A. 2016 Dec 27; 113(52): 15018–15023. Published online 2016 Dec 13. doi: 10.1073/pnas.1611861114

PMCID:: PMC5206536

Abstract Article PDF–1.0M

Select item 40207912.

Protein Languages Differ Depending on Microorganism Lifestyle

Joseph J. Grzymski, Adam G. Marsh

PLoS One. 2014; 9(5): e96910. Published online 2014 May 14. doi: 10.1371/journal.pone.0096910

PMCID:: PMC4020791

Abstract Article PDF–1.7M

Select item 79381223.

Information theoretic perspective on genome clustering

Alaguraj Veluchamy, Preeti Mehta, K.V. Srividhya, Hirendra Vikram, M.K. Govind, Ramneek Gupta, Abdul Aziz Bin Dukhyil, Raed Abdullah Alharbi, Saleh Abdullah Aloyuni, Mohamed M. Hassan, S. Krishnaswamy

Saudi J Biol Sci. 2021 Mar; 28(3): 1867–1889. Published online 2020 Dec 31. doi: 10.1016/j.sjbs.2020.12.039

PMCID:: PMC7938122

Abstract Article PDF–1.5M

Select item 49189814.

Phylogeny Reconstruction with Alignment-Free Method That Corrects for Horizontal Gene Transfer

Raquel Bromberg, Nick V. Grishin, Zbyszek Otwinowski

PLoS Comput Biol. 2016 Jun; 12(6): e1004985. Published online 2016 Jun 23. doi: 10.1371/journal.pcbi.1004985

PMCID:: PMC4918981

Abstract Article PDF–1.6M

Select item 47125525.

A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling

Rosalinda D’Amore, Umer Zeeshan Ijaz, Melanie Schirmer, John G. Kenny, Richard Gregory, Alistair C. Darby, Migun Shakya, Mircea Podar, Christopher Quince, Neil Hall

BMC Genomics. 2016; 17: 55. Published online 2016 Jan 14. doi: 10.1186/s12864-015-2194-9

PMCID:: PMC4712552

Abstract Article PDF–1.2M

Select item 39276076.

Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms

Arshan Nasir, Aisha Naeem, Muhammad Jawad Khan, Horacio D. Lopez-Nicora, Gustavo Caetano-Anollés

Genes (Basel) 2011 Dec; 2(4): 869–911. Published online 2011 Nov 8. doi: 10.3390/genes2040869

PMCID:: PMC3927607

Abstract Article PDF–2.0M

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