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Items: 1 to 20 of 59

1.
Microbiota is structured by gut regions, life stage, and diet in the Black Soldier Fly (Hermetia illucens)
Laurence Auger, Marie-Hélène Deschamps, Grant Vandenberg, Nicolas Derome
Front Microbiol. 2023; 14: 1221728. Published online 2023 Aug 17. doi: 10.3389/fmicb.2023.1221728
PMCID:
PMC10469785
AbstractArticlePDF–4.0M
2.
Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
Kang Eun Kim, Hyoung Min Joo, Taek-Kyun Lee, Hyun-Jung Kim, Yu Jin Kim, Bo Kyung Kim, Sun-Yong Ha, Seung Won Jung
Microorganisms. 2023 Jan; 11(1): 169. Published online 2023 Jan 9. doi: 10.3390/microorganisms11010169
PMCID:
PMC9862967
AbstractArticlePDF–3.2M
3.
Coronamoeba villafranca gen. nov. sp. nov. (Amoebozoa, Dermamoebida) challenges the correlation of morphology and phylogeny in Amoebozoa
Alexander Kudryavtsev, Fyodor Voytinsky, Ekaterina Volkova
Sci Rep. 2022; 12: 12541. Published online 2022 Jul 22. doi: 10.1038/s41598-022-16721-2
PMCID:
PMC9307759
AbstractArticlePDF–1.8M
4.
The gut fungal and bacterial microbiota in pediatric patients with inflammatory bowel disease introduced to treatment with anti-tumor necrosis factor-α
Rebecka Ventin-Holmberg, Miikka Höyhtyä, Schahzad Saqib, Katri Korpela, Anne Nikkonen, Anne Salonen, Willem M. de Vos, Kaija-Leena Kolho
Sci Rep. 2022; 12: 6654. Published online 2022 Apr 22. doi: 10.1038/s41598-022-10548-7
PMCID:
PMC9033777
AbstractArticlePDF–1.4M
5.
Impacts of UV-C Irradiation on Marine Biofilm Community Succession
Abhishek Naik, Mark Smithers, Pia H. Moisander
Appl Environ Microbiol. 2022 Feb; 88(4): e02298-21. Prepublished online 2021 Dec 22. Published online 2022 Feb 22. doi: 10.1128/aem.02298-21
PMCID:
PMC8863041
AbstractArticlePDF–4.3M
6.
Seasonal Variability of Photosynthetic Microbial Eukaryotes (<3 µm) in the Kara Sea Revealed by 18S rDNA Metabarcoding of Sediment Trap Fluxes
Tatiana A. Belevich, Irina A. Milyutina, Aleksey V. Troitsky
Plants (Basel) 2021 Nov; 10(11): 2394. Published online 2021 Nov 6. doi: 10.3390/plants10112394
PMCID:
PMC8618269
AbstractArticlePDF–4.0M
7.
Evolutionary Genomics of Sex-Related Chromosomes at the Base of the Green Lineage
Luis Felipe Benites, François Bucchini, Sophie Sanchez-Brosseau, Nigel Grimsley, Klaas Vandepoele, Gwenaël Piganeau
Genome Biol Evol. 2021 Oct; 13(10): evab216. Published online 2021 Oct 1. doi: 10.1093/gbe/evab216
PMCID:
PMC8557840
AbstractArticlePDF–1.9M
8.
Dataset supporting the use of nematodes as bioindicators of polluted sediments
Janina Schenk, Sebastian Höss, Marvin Brinke, Nils Kleinbölting, Henrike Brüchner-Hüttemann, Walter Traunspurger
Data Brief. 2020 Oct; 32: 106087. Published online 2020 Jul 26. doi: 10.1016/j.dib.2020.106087
PMCID:
PMC7412863
AbstractArticlePDF–2.7M
9.
Biodiversity assessment of tropical shelf eukaryotic communities via pelagic eDNA metabarcoding
Judith Bakker, Owen S. Wangensteen, Charles Baillie, Dayne Buddo, Demian D. Chapman, Austin J. Gallagher, Tristan L. Guttridge, Heidi Hertler, Stefano Mariani
Ecol Evol. 2019 Dec; 9(24): 14341–14355. Published online 2019 Dec 3. doi: 10.1002/ece3.5871
PMCID:
PMC6953649
AbstractArticlePDF–1.2M
10.
SCGid: a consensus approach to contig filtering and genome prediction from single-cell sequencing libraries of uncultured eukaryotes
Kevin R Amses, William J Davis, Timothy Y James
Bioinformatics. 2020 Apr 1; 36(7): 1994–2000. Published online 2019 Nov 25. doi: 10.1093/bioinformatics/btz866
PMCID:
PMC7141854
AbstractArticlePDF–3.0M
11.
Temporal and spatial dynamics of Bacteria, Archaea and protists in equatorial coastal waters
Caroline Chénard, Winona Wijaya, Daniel Vaulot, Adriana Lopes dos Santos, Patrick Martin, Avneet Kaur, Federico M. Lauro
Sci Rep. 2019; 9: 16390. Published online 2019 Nov 8. doi: 10.1038/s41598-019-52648-x
PMCID:
PMC6841670
AbstractArticlePDF–1.7M
12.
Integrated Space-Time Dataset Reveals High Diversity and Distinct Community Structure of Ciliates in Mesopelagic Waters of the Northern South China Sea
Ping Sun, Liying Huang, Dapeng Xu, Alan Warren, Bangqin Huang, Ying Wang, Lei Wang, Wupeng Xiao, Jie Kong
Front Microbiol. 2019; 10: 2178. Published online 2019 Sep 24. doi: 10.3389/fmicb.2019.02178
PMCID:
PMC6768975
AbstractArticlePDF–4.1M
13.
Insight into picophytoplankton diversity of the subarctic White Sea—The first recording of Pedinophyceae in environmental DNA
Irina A. Milyutina, Tatyana A. Belevich, Lyudmila V. Ilyash, Aleksey V. Troitsky
Microbiologyopen. 2019 Oct; 8(10): e892. Published online 2019 Jun 11. doi: 10.1002/mbo3.892
PMCID:
PMC6813492
AbstractArticlePDF–2.5M
14.
Low-Temperature Sulfidic-Ice Microbial Communities, Borup Fiord Pass, Canadian High Arctic
Christopher B. Trivedi, Graham E. Lau, Stephen E. Grasby, Alexis S. Templeton, John R. Spear
Front Microbiol. 2018; 9: 1622. Published online 2018 Jul 24. doi: 10.3389/fmicb.2018.01622
PMCID:
PMC6066561
AbstractArticlePDF–2.4M
15.
Malassezia arunalokei sp. nov., a Novel Yeast Species Isolated from Seborrheic Dermatitis Patients and Healthy Individuals from India
Prasanna Honnavar, Gandham S. Prasad, Anup Ghosh, Sunil Dogra, Sanjeev Handa, Shivaprakash M. Rudramurthy
J Clin Microbiol. 2016 Jul; 54(7): 1826–1834. Prepublished online 2016 May 4. Published online 2016 Jun 24. doi: 10.1128/JCM.00683-16
PMCID:
PMC4922115
AbstractArticlePDF–1.4M
16.
18S rRNA V9 metabarcoding for diet characterization: a critical evaluation with two sympatric zooplanktivorous fish species
Aitor Albaina, Mikel Aguirre, David Abad, María Santos, Andone Estonba
Ecol Evol. 2016 Mar; 6(6): 1809–1824. Published online 2016 Feb 19. doi: 10.1002/ece3.1986
PMCID:
PMC4801955
AbstractArticlePDF–673K
17.
A comprehensive framework for functional diversity patterns of marine chromophytic phytoplankton using rbcL phylogeny
Brajogopal Samanta, Punyasloke Bhadury
Sci Rep. 2016; 6: 20783. Published online 2016 Feb 10. doi: 10.1038/srep20783
PMCID:
PMC4748293
AbstractArticlePDF–1.1M
18.
High-Throughput Sequencing—The Key to Rapid Biodiversity Assessment of Marine Metazoa?
Inga Mohrbeck, Michael J. Raupach, Pedro Martínez Arbizu, Thomas Knebelsberger, Silke Laakmann
PLoS One. 2015; 10(10): e0140342. Published online 2015 Oct 19. doi: 10.1371/journal.pone.0140342
PMCID:
PMC4610693
AbstractArticlePDF–1.4M
19.
Toward accurate molecular identification of species in complex environmental samples: testing the performance of sequence filtering and clustering methods
Jullien M Flynn, Emily A Brown, Frédéric J J Chain, Hugh J MacIsaac, Melania E Cristescu
Ecol Evol. 2015 Jun; 5(11): 2252–2266. Published online 2015 May 13. doi: 10.1002/ece3.1497
PMCID:
PMC4461425
AbstractArticlePDF–568K
20.
Diversity change of microbial communities responding to zinc and arsenic pollution in a river of northeastern China
Jun Zhao, Xin Zhao, Lei Chao, Wei Zhang, Tao You, Jie Zhang
J Zhejiang Univ Sci B. 2014 Jul; 15(7): 670–680. doi: 10.1631/jzus.B1400003
PMCID:
PMC4097376
AbstractArticlePDF–1.2M

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