txid137419[Organism:noexp] - PMC

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Items: 13

Select item 97467031.

Reduced mitochondria provide an essential function for the cytosolic methionine cycle

Justyna Zítek, Zoltán Füssy, Sebastian C. Treitli, Priscila Peña-Diaz, Zuzana Vaitová, Daryna Zavadska, Karel Harant, Vladimír Hampl

Curr Biol. 2022 Dec 5; 32(23): 5057–5068.e5. doi: 10.1016/j.cub.2022.10.028

PMCID:: PMC9746703

Abstract Article

Select item 92557652.

Old genes in new places: A taxon-rich analysis of interdomain lateral gene transfer events

Auden Cote-L’Heureux, Xyrus X. Maurer-Alcalá, Laura A. Katz

PLoS Genet. 2022 Jun; 18(6): e1010239. Published online 2022 Jun 22. doi: 10.1371/journal.pgen.1010239

PMCID:: PMC9255765

Abstract Article PDF–2.3M

Select item 62314883.

Fe–S Cluster Assembly in Oxymonads and Related Protists

Vojtěch Vacek, Lukáš V F Novák, Sebastian C Treitli, Petr Táborský, Ivan Čepička, Martin Kolísko, Patrick J Keeling, Vladimír Hampl

Mol Biol Evol. 2018 Nov; 35(11): 2712–2718. Published online 2018 Sep 1. doi: 10.1093/molbev/msy168

PMCID:: PMC6231488

Abstract Article PDF–624K

Select item 42329724.

Complex communities of small protists and unexpected occurrence of typical marine lineages in shallow freshwater systems

Marianne Simon, Ludwig Jardillier, Philippe Deschamps, David Moreira, Gwendal Restoux, Paola Bertolino, Purificación López-García

Environ Microbiol. Author manuscript; available in PMC 2015 Oct 26.

Published in final edited form as: Environ Microbiol. 2015 Oct; 17(10): 3610–3627. Published online 2014 Sep 15. doi: 10.1111/1462-2920.12591

PMCID:: PMC4232972

Abstract Article PDF–1.7M

Select item 107032725.

Genomics of Preaxostyla Flagellates Illuminates the Path Towards the Loss of Mitochondria

Lukáš V. F. Novák, Sebastian C. Treitli, Jan Pyrih, Paweł Hałakuc, Shweta V. Pipaliya, Vojtěch Vacek, Ondřej Brzoň, Petr Soukal, Laura Eme, Joel B. Dacks, Anna Karnkowska, Marek Eliáš, Vladimír Hampl

PLoS Genet. 2023 Dec; 19(12): e1011050. Published online 2023 Dec 7. doi: 10.1371/journal.pgen.1011050

PMCID:: PMC10703272

Abstract Article PDF–1.9M

Select item 98383176.

Asteroid: a new algorithm to infer species trees from gene trees under high proportions of missing data

Benoit Morel, Tom A Williams, Alexandros Stamatakis

Bioinformatics. 2023 Jan; 39(1): btac832. Published online 2022 Dec 28. doi: 10.1093/bioinformatics/btac832

PMCID:: PMC9838317

Abstract Article PDF–878K

Select item 90103567.

Ciliary transition zone evolution and the root of the eukaryote tree: implications for opisthokont origin and classification of kingdoms Protozoa, Plantae, and Fungi

Thomas Cavalier-Smith

Protoplasma. 2022; 259(3): 487–593. Published online 2021 Dec 23. doi: 10.1007/s00709-021-01665-7

PMCID:: PMC9010356

Abstract Article PDF–26M

Select item 69348868.

Lateral Acquisitions Repeatedly Remodel the Oxygen Detoxification Pathway in Diplomonads and Relatives

Alejandro Jiménez-González, Feifei Xu, Jan O Andersson

Genome Biol Evol. 2019 Sep; 11(9): 2542–2556. Published online 2019 Sep 5. doi: 10.1093/gbe/evz188

PMCID:: PMC6934886

Abstract Article PDF–602K

Select item 67590809.

The Oxymonad Genome Displays Canonical Eukaryotic Complexity in the Absence of a Mitochondrion

Anna Karnkowska, Sebastian C Treitli, Ondřej Brzoň, Lukáš Novák, Vojtěch Vacek, Petr Soukal, Lael D Barlow, Emily K Herman, Shweta V Pipaliya, Tomáš Pánek, David Žihala, Romana Petrželková, Anzhelika Butenko, Laura Eme, Courtney W Stairs, Andrew J Roger, Marek Eliáš, Joel B Dacks, Vladimír Hampl

Mol Biol Evol. 2019 Oct; 36(10): 2292–2312. Published online 2019 Aug 6. doi: 10.1093/molbev/msz147

PMCID:: PMC6759080

Abstract Article PDF–1.1M

Select item 649200610.

Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes

Sina M. Adl, David Bass, Christopher E. Lane, Julius Lukeš, Conrad L. Schoch, Alexey Smirnov, Sabine Agatha, Cedric Berney, Matthew W. Brown, Fabien Burki, Paco Cárdenas, Ivan Čepička, Lyudmila Chistyakova, Javier del Campo, Micah Dunthorn, Bente Edvardsen, Yana Eglit, Laure Guillou, Vladimír Hampl, Aaron A. Heiss, Mona Hoppenrath, Timothy Y. James, Anna Karnkowska, Sergey Karpov, Eunsoo Kim, Martin Kolisko, Alexander Kudryavtsev, Daniel J.G. Lahr, Enrique Lara, Line Le Gall, Denis H. Lynn, David G. Mann, Ramon Massana, Edward A.D. Mitchell, Christine Morrow, Jong Soo Park, Jan W. Pawlowski, Martha J. Powell, Daniel J. Richter, Sonja Rueckert, Lora Shadwick, Satoshi Shimano, Frederick W. Spiegel, Guifré Torruella, Noha Youssef, Vasily Zlatogursky, Qianqian Zhang

J Eukaryot Microbiol. 2019 Jan-Feb; 66(1): 4–119. Published online 2019 Jan 19. doi: 10.1111/jeu.12691

PMCID:: PMC6492006

Abstract Article PDF–1.5M

Select item 593690611.

Combined morphological and phylogenomic re-examination of malawimonads, a critical taxon for inferring the evolutionary history of eukaryotes

Aaron A. Heiss, Martin Kolisko, Fleming Ekelund, Matthew W. Brown, Andrew J. Roger, Alastair G. B. Simpson

R Soc Open Sci. 2018 Apr; 5(4): 171707. Published online 2018 Apr 4. doi: 10.1098/rsos.171707

PMCID:: PMC5936906

Abstract Article PDF–1.5M

Select item 541126012.

Organelles that illuminate the origins of Trichomonas hydrogenosomes and Giardia mitosomes

Michelle M. Leger, Martin Kolisko, Ryoma Kamikawa, Courtney W. Stairs, Keitaro Kume, Ivan Cepicka, Jeffrey D. Silberman, Jan O. Andersson, Feifei Xu, Akinori Yabuki, Laura Eme, Qianqian Zhang, Kiyotaka Takishita, Yuji Inagaki, Alastair G. B. Simpson, Tetsuo Hashimoto, Andrew J. Roger

Nat Ecol Evol. Author manuscript; available in PMC 2017 Oct 1.

Published in final edited form as: Nat Ecol Evol. 2017 Apr 1; 1(4): 0092. doi: 10.1038/s41559-017-0092

PMCID:: PMC5411260

Article PDF–1.2M

Select item 505287113.

Arginine deiminase pathway enzymes: evolutionary history in metamonads and other eukaryotes

Lukáš Novák, Zuzana Zubáčová, Anna Karnkowska, Martin Kolisko, Miluše Hroudová, Courtney W. Stairs, Alastair G. B. Simpson, Patrick J. Keeling, Andrew J. Roger, Ivan Čepička, Vladimír Hampl

BMC Evol Biol. 2016; 16: 197. Published online 2016 Oct 6. doi: 10.1186/s12862-016-0771-4

PMCID:: PMC5052871

Abstract Article PDF–1.1M

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