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Select item 110726791.

Linking methanotroph phenotypes to genotypes using a simple spatially resolved model ecosystem

Delaney G Beals, Aaron W Puri

ISME J. 2024 Jan; 18(1): wrae060. Published online 2024 Apr 16. doi: 10.1093/ismejo/wrae060

PMCID:: PMC11072679

Abstract Article PDF–1.0M

Select item 109598012.

Targeting methanotrophs and isolation of a novel psychrophilic Methylobacter species from a terrestrial Arctic alkaline methane seep in Lagoon Pingo, Central Spitsbergen (78° N)

Shalaka K. Patil, Tajul Islam, Alexander Tveit, Andrew Hodson, Lise Øvreås

Antonie Van Leeuwenhoek. 2024; 117(1): 60. Published online 2024 Mar 22. doi: 10.1007/s10482-024-01953-1

PMCID:: PMC10959801

Abstract Article PDF–2.3M

Select item 98882813.

Cre/lox-Mediated CRISPRi Library Reveals Core Genome of a Type I Methanotroph Methylotuvimicrobium buryatense 5GB1C

Minggen Cheng, Dongmei Pei, Lian He, Qiang Fei, Xin Yan

Appl Environ Microbiol. 2023 Jan; 89(1): e01883-22. Published online 2023 Jan 9. doi: 10.1128/aem.01883-22

PMCID:: PMC9888281

Abstract Article PDF–1.2M

Select item 98533994.

How methanotrophs respond to pH: A review of ecophysiology

Xiangwu Yao, Jiaqi Wang, Baolan Hu

Front Microbiol. 2022; 13: 1034164. Published online 2023 Jan 6. doi: 10.3389/fmicb.2022.1034164

PMCID:: PMC9853399

Abstract Article PDF–1.3M

Select item 97237415.

Characterization and genome analysis of a psychrophilic methanotroph representing a ubiquitous Methylobacter spp. cluster in boreal lake ecosystems

Ramita Khanongnuch, Rahul Mangayil, Mette Marianne Svenning, Antti Juhani Rissanen

ISME Commun. 2022; 2: 85. Published online 2022 Sep 19. doi: 10.1038/s43705-022-00172-x

PMCID:: PMC9723741

Abstract Article PDF–1.4M

Select item 92280766.

Microbial Community Composition of the Antarctic Ecosystems: Review of the Bacteria, Fungi, and Archaea Identified through an NGS-Based Metagenomics Approach

Vesselin V. Doytchinov, Svetoslav G. Dimov

Life (Basel) 2022 Jun; 12(6): 916. Published online 2022 Jun 18. doi: 10.3390/life12060916

PMCID:: PMC9228076

Abstract Article PDF–1.1M

Select item 91959527.

A Conserved Biosynthetic Gene Cluster Is Regulated by Quorum Sensing in a Shipworm Symbiont

Jose Miguel D. Robes, Marvin A. Altamia, Ethan G. Murdock, Gisela P. Concepcion, Margo G. Haygood, Aaron W. Puri

Appl Environ Microbiol. 2022 Jun; 88(11): e00270-22. Published online 2022 May 25. doi: 10.1128/aem.00270-22

PMCID:: PMC9195952

Abstract Article PDF–731K

Select item 91628038.

Batch Experiments Demonstrating a Two-Stage Bacterial Process Coupling Methanotrophic and Heterotrophic Bacteria for 1-Alkene Production From Methane

Ramita Khanongnuch, Rahul Mangayil, Ville Santala, Anne Grethe Hestnes, Mette Marianne Svenning, Antti J. Rissanen

Front Microbiol. 2022; 13: 874627. Published online 2022 May 19. doi: 10.3389/fmicb.2022.874627

PMCID:: PMC9162803

Abstract Article PDF–6.7M

Select item 92390539.

The Proteobacterial Methanotroph Methylosinus trichosporium OB3b Remodels Membrane Lipids in Response to Phosphate Limitation

Julie Scanlan, Richard Guillonneau, Mark R. Cunningham, Sahanara Najmin, Michaela A. Mausz, Andrew Murphy, Leanne L. Murray, Limei Zhang, Deepak Kumaresan, Yin Chen

mBio. 2022 May-Jun; 13(3): e00247-22. Published online 2022 May 16. doi: 10.1128/mbio.00247-22

PMCID:: PMC9239053

Abstract Article PDF–3.0M

Select item 861685410.

Target highlights in CASP14: Analysis of models by structure providers

Leila T. Alexander, Rosalba Lepore, Andriy Kryshtafovych, Athanassios Adamopoulos, Markus Alahuhta, Ann M. Arvin, Yannick J. Bomble, Bettina Böttcher, Cécile Breyton, Valerio Chiarini, Naga babu Chinnam, Wah Chiu, Krzysztof Fidelis, Rhys Grinter, Gagan D. Gupta, Marcus D. Hartmann, Christopher S. Hayes, Tatjana Heidebrecht, Andrea Ilari, Andrzej Joachimiak, Youngchang Kim, Romain Linares, Andrew L. Lovering, Vladimir V. Lunin, Andrei N. Lupas, Cihan Makbul, Karolina Michalska, John Moult, Prasun K. Mukherjee, William (Sam) Nutt, Stefan L. Oliver, Anastassis Perrakis, Lucy Stols, John A. Tainer, Maya Topf, Susan E. Tsutakawa, Mauricio Valdivia‐Delgado, Torsten Schwede

Proteins. 2021 Dec; 89(12): 1647–1672. Published online 2021 Oct 10. doi: 10.1002/prot.26247

PMCID:: PMC8616854

Abstract Article PDF–12M

Select item 852709711.

Expanding Characterized Diversity and the Pool of Complete Genome Sequences of Methylococcus Species, the Bacteria of High Environmental and Biotechnological Relevance

Igor Y. Oshkin, Olga V. Danilova, Sergey Y. But, Kirill K. Miroshnikov, Ruslan Z. Suleimanov, Svetlana E. Belova, Ekaterina N. Tikhonova, Nikolai N. Kuznetsov, Valentina N. Khmelenina, Nikolai V. Pimenov, Svetlana N. Dedysh

Front Microbiol. 2021; 12: 756830. Published online 2021 Oct 6. doi: 10.3389/fmicb.2021.756830

PMCID:: PMC8527097

Abstract Article PDF–4.2M

Select item 854659112.

Neodymium as Metal Cofactor for Biological Methanol Oxidation: Structure and Kinetics of an XoxF1-Type Methanol Dehydrogenase

Rob A. Schmitz, Nunzia Picone, Helena Singer, Andreas Dietl, Kerstin-Anikó Seifert, Arjan Pol, Mike S. M. Jetten, Thomas R. M. Barends, Lena J. Daumann, Huub J. M. Op den Camp

mBio. 2021 Sep-Oct; 12(5): e01708-21. Published online 2021 Sep 21. doi: 10.1128/mBio.01708-21

PMCID:: PMC8546591

Abstract Article PDF–2.5M

Select item 844724513.

Cultivation of Important Methanotrophs From Indian Rice Fields

Monali C. Rahalkar, Kumal Khatri, Pranitha Pandit, Rahul A. Bahulikar, Jyoti A. Mohite

Front Microbiol. 2021; 12: 669244. Published online 2021 Sep 3. doi: 10.3389/fmicb.2021.669244

PMCID:: PMC8447245

Abstract Article PDF–2.1M

Select item 849645914.

Methylotroph Quorum Sensing Signal Identification by Inverse Stable Isotopic Labeling

Dale A. Cummings, Jr., Alice I. Snelling, Aaron W. Puri

ACS Chem Biol. Author manuscript; available in PMC 2021 Oct 7.

Published in final edited form as: ACS Chem Biol. 2021 Aug 20; 16(8): 1332–1338. Published online 2021 Jul 30. doi: 10.1021/acschembio.1c00329

PMCID:: PMC8496459

Abstract Article PDF–692K

Select item 790257615.

Draft genome of a novel methanotrophic Methylobacter sp. from the volcanic soils of Pantelleria Island

Carmen Hogendoorn, Nunzia Picone, Femke van Hout, Sophie Vijverberg, Lianna Poghosyan, Theo A. van Alen, Jeroen Frank, Arjan Pol, Antonia L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp

Antonie Van Leeuwenhoek. 2021; 114(3): 313–324. Published online 2021 Feb 10. doi: 10.1007/s10482-021-01525-7

PMCID:: PMC7902576

Abstract Article PDF–1.1M

Select item 771621316.

Genomic and Physiological Properties of a Facultative Methane-Oxidizing Bacterial Strain of Methylocystis sp. from a Wetland

Gi-Yong Jung, Sung-Keun Rhee, Young-Soo Han, So-Jeong Kim

Microorganisms. 2020 Nov; 8(11): 1719. Published online 2020 Nov 2. doi: 10.3390/microorganisms8111719

PMCID:: PMC7716213

Abstract Article PDF–4.6M

Select item 767727817.

Planktonic and Benthic Bacterial Communities of the Largest Central European Shallow Lake, Lake Balaton and Its Main Inflow Zala River

Milán Farkas, Edit Kaszab, Júlia Radó, Judit Háhn, Gergő Tóth, Péter Harkai, Árpád Ferincz, Zsófia Lovász, András Táncsics, Lajos Vörös, Balázs Kriszt, Sándor Szoboszlay

Curr Microbiol. 2020; 77(12): 4016–4028. Published online 2020 Oct 17. doi: 10.1007/s00284-020-02241-7

PMCID:: PMC7677278

Abstract Article PDF–2.0M

Select item 741221218.

Chlamydomonas reinhardtii, an Algal Model in the Nitrogen Cycle

Carmen M. Bellido-Pedraza, Victoria Calatrava, Emanuel Sanz-Luque, Manuel Tejada-Jiménez, Ángel Llamas, Maxence Plouviez, Benoit Guieysse, Emilio Fernández, Aurora Galván

Plants (Basel) 2020 Jul; 9(7): 903. Published online 2020 Jul 16. doi: 10.3390/plants9070903

PMCID:: PMC7412212

Abstract Article PDF–735K

Select item 733365119.

Investigation of microbial community interactions between Lake Washington methanotrophs using genome-scale metabolic modeling

Mohammad Mazharul Islam, Tony Le, Shardhat R. Daggumati, Rajib Saha

PeerJ. 2020; 8: e9464. Published online 2020 Jun 30. doi: 10.7717/peerj.9464

PMCID:: PMC7333651

Abstract Article PDF–520K

Select item 724010620.

Impact of Electron Acceptor Availability on Methane-Influenced Microorganisms in an Enrichment Culture Obtained From a Stratified Lake

Sigrid van Grinsven, Jaap S. Sinninghe Damsté, John Harrison, Laura Villanueva

Front Microbiol. 2020; 11: 715. Published online 2020 May 14. doi: 10.3389/fmicb.2020.00715

PMCID:: PMC7240106

Abstract Article PDF–1.2M

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