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Items: 1 to 20 of 23

1.
Freshwater plastisphere: a review on biodiversity, risks, and biodegradation potential with implications for the aquatic ecosystem health
Valerio Bocci, Silvia Galafassi, Caterina Levantesi, Simona Crognale, Stefano Amalfitano, Roberta Congestri, Bruna Matturro, Simona Rossetti, Francesca Di Pippo
Front Microbiol. 2024; 15: 1395401. Published online 2024 Apr 18. doi: 10.3389/fmicb.2024.1395401
PMCID:
PMC11064797
AbstractArticlePDF–1.1M
2.
Dominance of Sulfurospirillum in Metagenomes Associated with the Methane Ice Worm (Sirsoe methanicola)
Shen Jean Lim, Luke R. Thompson, Craig M. Young, Terry Gaasterland, Kelly D. Goodwin
Appl Environ Microbiol. 2022 Aug; 88(15): e00290-22. Published online 2022 Jul 12. doi: 10.1128/aem.00290-22
PMCID:
PMC9365241
AbstractArticlePDF–3.5M
3.
Machine Learning Predicts Biogeochemistry from Microbial Community Structure in a Complex Model System
Avishek Dutta, Thomas Goldman, Jeffrey Keating, Ellen Burke, Nicole Williamson, Reinhard Dirmeier, Jeff S. Bowman
Microbiol Spectr. 2022 Jan-Feb; 10(1): e01909-21. Published online 2022 Feb 9. doi: 10.1128/spectrum.01909-21
PMCID:
PMC8826735
AbstractArticlePDF–2.5M
4.
Long-Chain Fatty Acids Degradation by Desulfomonile Species and Proposal of “Candidatus Desulfomonile Palmitatoxidans”
Joana I. Alves, Andreia F. Salvador, A. Rita Castro, Ying Zheng, Bart Nijsse, Siavash Atashgahi, Diana Z. Sousa, Alfons J. M. Stams, M. Madalena Alves, Ana J. Cavaleiro
Front Microbiol. 2020; 11: 539604. Published online 2020 Dec 17. doi: 10.3389/fmicb.2020.539604
PMCID:
PMC7773648
AbstractArticlePDF–2.0M
5.
The Various Roles of Fatty Acids
Carla C. C. R. de Carvalho, Maria José Caramujo
Molecules. 2018 Oct; 23(10): 2583. Published online 2018 Oct 9. doi: 10.3390/molecules23102583
PMCID:
PMC6222795
AbstractArticlePDF–2.5M
6.
Temperature-Dependent Alkyl Glycerol Ether Lipid Composition of Mesophilic and Thermophilic Sulfate-Reducing Bacteria
Arnauld Vinçon-Laugier, Cristiana Cravo-Laureau, Isabelle Mitteau, Vincent Grossi
Front Microbiol. 2017; 8: 1532. Published online 2017 Aug 9. doi: 10.3389/fmicb.2017.01532
PMCID:
PMC5552659
AbstractArticlePDF–2.2M
7.
Soil bioremediation approaches for petroleum hydrocarbon polluted environments
Eman Koshlaf, Andrew S Ball
AIMS Microbiol. 2017; 3(1): 25–49. Published online 2017 Jan 19. doi: 10.3934/microbiol.2017.1.25
PMCID:
PMC6604977
AbstractArticlePDF–1.2M
8.
Effective bioremediation strategy for rapid in situ cleanup of anoxic marine sediments in mesocosm oil spill simulation
Maria Genovese, Francesca Crisafi, Renata Denaro, Simone Cappello, Daniela Russo, Rosario Calogero, Santina Santisi, Maurizio Catalfamo, Alfonso Modica, Francesco Smedile, Lucrezia Genovese, Peter N. Golyshin, Laura Giuliano, Michail M. Yakimov
Front Microbiol. 2014; 5: 162. Published online 2014 Apr 14. doi: 10.3389/fmicb.2014.00162
PMCID:
PMC3995047
AbstractArticlePDF–1.2M
9.
Response to substrate limitation by a marine sulfate-reducing bacterium
Angeliki Marietou, Kasper U. Kjeldsen, Clemens Glombitza, Bo Barker Jørgensen
ISME J. 2022 Jan; 16(1): 200–210. Published online 2021 Jul 20. doi: 10.1038/s41396-021-01061-2
PMCID:
PMC8692349
AbstractArticlePDF–1.0M
10.
Thermogenic hydrocarbon biodegradation by diverse depth-stratified microbial populations at a Scotian Basin cold seep
Xiyang Dong, Jayne E. Rattray, D. Calvin Campbell, Jamie Webb, Anirban Chakraborty, Oyeboade Adebayo, Stuart Matthews, Carmen Li, Martin Fowler, Natasha M. Morrison, Adam MacDonald, Ryan A. Groves, Ian A. Lewis, Scott H. Wang, Daisuke Mayumi, Chris Greening, Casey R. J. Hubert
Nat Commun. 2020; 11: 5825. Published online 2020 Nov 17. doi: 10.1038/s41467-020-19648-2
PMCID:
PMC7673041
AbstractArticlePDF–4.1M
11.
Combined Use of Diagnostic Fumarate Addition Metabolites and Genes Provides Evidence for Anaerobic Hydrocarbon Biodegradation in Contaminated Groundwater
Gurpreet Kharey, Gabrielle Scheffer, Lisa M. Gieg
Microorganisms. 2020 Oct; 8(10): 1532. Published online 2020 Oct 6. doi: 10.3390/microorganisms8101532
PMCID:
PMC7599786
AbstractArticlePDF–3.4M
12.
Anaerobic degradation of hexadecane and phenanthrene coupled to sulfate reduction by enriched consortia from northern Gulf of Mexico seafloor sediment
Boryoung Shin, Minjae Kim, Karsten Zengler, Kuk-Jeong Chin, Will A. Overholt, Lisa M. Gieg, Konstantinos T. Konstantinidis, Joel E. Kostka
Sci Rep. 2019; 9: 1239. Published online 2019 Feb 4. doi: 10.1038/s41598-018-36567-x
PMCID:
PMC6361983
AbstractArticlePDF–2.3M
13.
Classifying nitrilases as aliphatic and aromatic using machine learning technique
Nikhil Sharma, Ruchi Verma, Savitri, Tek Chand Bhalla
3 Biotech. 2018 Jan; 8(1): 68. Published online 2018 Jan 12. doi: 10.1007/s13205-018-1102-9
PMCID:
PMC5766452
AbstractArticlePDF–1.0M
14.
Methanogenic Paraffin Biodegradation: Alkylsuccinate Synthase Gene Quantification and Dicarboxylic Acid Production
Lisa K. Oberding, Lisa M. Gieg
Appl Environ Microbiol. 2018 Jan 1; 84(1): e01773-17. Prepublished online 2017 Oct 13. Published online 2017 Dec 15. doi: 10.1128/AEM.01773-17
PMCID:
PMC5734044
AbstractArticlePDF–1.1M
15.
Sequence-based identification of inositol monophosphatase-like histidinol-phosphate phosphatases (HisN) in Corynebacterium glutamicum, Actinobacteria, and beyond
Robert Kasimir Kulis-Horn, Christian Rückert, Jörn Kalinowski, Marcus Persicke
BMC Microbiol. 2017; 17: 161. Published online 2017 Jul 18. doi: 10.1186/s12866-017-1069-4
PMCID:
PMC5516325
AbstractArticlePDF–2.5M
16.
High Diversity of Anaerobic Alkane-Degrading Microbial Communities in Marine Seep Sediments Based on (1-methylalkyl)succinate Synthase Genes
Marion H. Stagars, S. Emil Ruff, Rudolf Amann, Katrin Knittel
Front Microbiol. 2015; 6: 1511. Published online 2016 Jan 7. doi: 10.3389/fmicb.2015.01511
PMCID:
PMC4703814
AbstractArticlePDF–5.0M
17.
Ubiquitous Presence and Novel Diversity of Anaerobic Alkane Degraders in Cold Marine Sediments
Antje Gittel, Johanna Donhauser, Hans Røy, Peter R. Girguis, Bo B. Jørgensen, Kasper U. Kjeldsen
Front Microbiol. 2015; 6: 1414. Published online 2015 Dec 17. doi: 10.3389/fmicb.2015.01414
PMCID:
PMC4681840
AbstractArticlePDF–4.2M
18.
Enhanced Gene Detection Assays for Fumarate-Adding Enzymes Allow Uncovering of Anaerobic Hydrocarbon Degraders in Terrestrial and Marine Systems
Frederick von Netzer, Giovanni Pilloni, Sara Kleindienst, Martin Krüger, Katrin Knittel, Friederike Gründger, Tillmann Lueders
Appl Environ Microbiol. 2013 Jan; 79(2): 543–552. doi: 10.1128/AEM.02362-12
PMCID:
PMC3553772
AbstractArticlePDF–1.2M
19.
Sulfur bacteria in wastewater stabilization ponds periodically affected by the ‘red-water’ phenomenon
Abdelaziz Belila, Ben Abbas, Imed Fazaa, Neila Saidi, Mejdi Snoussi, Abdennaceur Hassen, Gerard Muyzer
Appl Microbiol Biotechnol. 2013; 97(1): 379–394. Published online 2012 Feb 23. doi: 10.1007/s00253-012-3931-5
PMCID:
PMC3536956
AbstractArticlePDF–998K
20.
Anaerobic Oxidation of Fatty Acids and Alkenes by the Hyperthermophilic Sulfate-Reducing Archaeon Archaeoglobus fulgidus
Nadia Khelifi, Vincent Grossi, Moktar Hamdi, Alain Dolla, Jean-Luc Tholozan, Bernard Ollivier, Agnès Hirschler-Réa
Appl Environ Microbiol. 2010 May; 76(9): 3057–3060. Published online 2010 Mar 19. doi: 10.1128/AEM.02810-09
PMCID:
PMC2863424
AbstractArticlePDF–239K

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