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Items: 1 to 20 of 805

1.
Oral microbiome dysbiosis among cigarette smokers and smokeless tobacco users compared to non-users
Suhana Chattopadhyay, Leena Malayil, Jessica Chopyk, Eoghan Smyth, Prachi Kulkarni, Greg Raspanti, Stephen B. Thomas, Amir Sapkota, Emmanuel F. Mongodin, Amy R. Sapkota
Sci Rep. 2024; 14: 10394. Published online 2024 May 6. doi: 10.1038/s41598-024-60730-2
PMCID:
PMC11074290
AbstractArticlePDF–7.5M
2.
Consistent signatures in the human gut microbiome of old- and young-onset colorectal cancer
Youwen Qin, Xin Tong, Wei-Jian Mei, Yanshuang Cheng, Yuanqiang Zou, Kai Han, Jiehai Yu, Zhuye Jie, Tao Zhang, Shida Zhu, Xin Jin, Jian Wang, Huanming Yang, Xun Xu, Huanzi Zhong, Liang Xiao, Pei-Rong Ding
Nat Commun. 2024; 15: 3396. Published online 2024 Apr 22. doi: 10.1038/s41467-024-47523-x
PMCID:
PMC11035630
AbstractArticlePDF–12M
3.
Microbial Profiles in Oral Lichen Planus: Comparisons with Healthy Controls and Erosive vs. Non-Erosive Subtypes
Hye-Min Ju, Yong-Woo Ahn, Soo-Min Ok, Sung-Hee Jeong, Hee-Sam Na, Jin Chung
Diagnostics (Basel) 2024 Apr; 14(8): 828. Published online 2024 Apr 17. doi: 10.3390/diagnostics14080828
PMCID:
PMC11049134
AbstractArticlePDF–8.9M
4.
Microbial composition associated with biliary stents in patients undergoing pancreatic resection for cancer
Aitor Blanco-Míguez, Sara Carloni, Cindy Cardenas, Carola Conca Dioguardi, Luca Lambroia, Giovanni Capretti, Gennaro Nappo, Alessandro Fugazza, Antonio Capogreco, Federica Armanini, Francesco Asnicar, Leonard Dubois, Davide Golzato, Paolo Manghi, Federica Pinto, Cristina Scuderi, Erminia Casari, Marco Montorsi, Andrea Anderloni, Maria Rescigno, Alessandro Repici, Alessandro Zerbi, Clelia Peano, Sabrina Tamburini, Roberto Rusconi, Nicola Segata
NPJ Biofilms Microbiomes. 2024; 10: 35. Published online 2024 Mar 30. doi: 10.1038/s41522-024-00506-8
PMCID:
PMC10981703
AbstractArticlePDF–2.3M
5.
Ancient Genomes From Bronze Age Remains Reveal Deep Diversity and Recent Adaptive Episodes for Human Oral Pathobionts
Iseult Jackson, Peter Woodman, Marion Dowd, Linda Fibiger, Lara M Cassidy
Mol Biol Evol. 2024 Mar; 41(3): msae017. Published online 2024 Mar 27. doi: 10.1093/molbev/msae017
PMCID:
PMC10966897
AbstractArticlePDF–3.8M
6.
Shotgun metagenomic analysis of the oral microbiome in gingivitis: a nested case-control study
Muhammed Manzoor, Jaakko Leskelä, Milla Pietiäinen, Nicolas Martinez-Majander, Eija Könönen, Teemu Niiranen, Leo Lahti, Juha Sinisalo, Jukka Putaala, Pirkko J. Pussinen, Susanna Paju
J Oral Microbiol. 2024; 16(1): 2330867. Published online 2024 Mar 22. doi: 10.1080/20002297.2024.2330867
PMCID:
PMC10962305
AbstractArticlePDF–4.7M
7.
Spatial ecology of Haemophilus and Aggregatibacter in the human oral cavity
Jonathan J. Giacomini, Julian Torres-Morales, Jonathan Tang, Floyd E. Dewhirst, Gary G. Borisy, Jessica L. Mark Welch
Microbiol Spectr. 2024 Apr; 12(4): e04017-23. Published online 2024 Mar 15. doi: 10.1128/spectrum.04017-23
PMCID:
PMC10986600
AbstractArticlePDF–3.3M
8.
Microbial Symphony: Navigating the Intricacies of the Human Oral Microbiome and Its Impact on Health
Rahul Bhandary, Geethu Venugopalan, Amitha Ramesh, Guilia Margherita Tartaglia, Ishita Singhal, Shahnawaz Khijmatgar
Microorganisms. 2024 Mar; 12(3): 571. Published online 2024 Mar 13. doi: 10.3390/microorganisms12030571
PMCID:
PMC10974905
AbstractArticlePDF–740K
9.
Identification of microbial pathogens in Neolithic Scandinavian humans
Nora Bergfeldt, Emrah Kırdök, Nikolay Oskolkov, Claudio Mirabello, Per Unneberg, Helena Malmström, Magdalena Fraser, Federico Sanchez-Quinto, Roger Jorgensen, Birgitte Skar, Kerstin Lidén, Mattias Jakobsson, Jan Storå, Anders Götherström
Sci Rep. 2024; 14: 5630. Published online 2024 Mar 7. doi: 10.1038/s41598-024-56096-0
PMCID:
PMC10920878
AbstractArticlePDF–2.1M
10.
Next-Generation Sequencing (NGS): Platforms and Applications
Jyoti S. Mandlik, Amol S. Patil, Sarita Singh
J Pharm Bioallied Sci. 2024 Feb; 16(Suppl 1): S41–S45. Published online 2024 Feb 29. doi: 10.4103/jpbs.jpbs_838_23
PMCID:
PMC11001031
AbstractArticle
11.
Effect of different forms of tobacco on the oral microbiome in healthy adults: a systematic review
Nikitha Lalindri Mareena Senaratne, Cheng Yung on, Naresh Yedthare Shetty, Divya Gopinath
Front Oral Health. 2024; 5: 1310334. Published online 2024 Feb 20. doi: 10.3389/froh.2024.1310334
PMCID:
PMC10912582
AbstractArticlePDF–7.1M
12.
Oral bacteriophages: metagenomic clues to interpret microbiomes
Maryam Banar, Dinesh Rokaya, Reza Azizian, Zohaib Khurshid, Morteza Banakar
PeerJ. 2024; 12: e16947. Published online 2024 Feb 20. doi: 10.7717/peerj.16947
PMCID:
PMC10885796
AbstractArticlePDF–7.5M
13.
Validated WGS and WES protocols proved saliva-derived gDNA as an equivalent to blood-derived gDNA for clinical and population genomic analyses
Katerina Kvapilova, Pavol Misenko, Jan Radvanszky, Ondrej Brzon, Jaroslav Budis, Juraj Gazdarica, Ondrej Pos, Marie Korabecna, Martin Kasny, Tomas Szemes, Petr Kvapil, Jan Paces, Zbynek Kozmik
BMC Genomics. 2024; 25: 187. Published online 2024 Feb 17. doi: 10.1186/s12864-024-10080-0
PMCID:
PMC10873937
AbstractArticlePDF–2.9M
14.
PM-CNN: microbiome status recognition and disease detection model based on phylogeny and multi-path neural network
Qiangqiang Wang, Xiaoqian Fan, Shunyao Wu, Xiaoquan Su
Bioinform Adv. 2024; 4(1): vbae013. Published online 2024 Jan 27. doi: 10.1093/bioadv/vbae013
PMCID:
PMC10873578
AbstractArticlePDF–1.3M
15.
Intratumoral microorganisms in tumors of the digestive system
Mengjuan Xuan, Xinyu Gu, Yingru Liu, Li Yang, Yi Li, Di Huang, Juan Li, Chen Xue
Cell Commun Signal. 2024; 22: 69. Published online 2024 Jan 25. doi: 10.1186/s12964-023-01425-5
PMCID:
PMC10811838
AbstractArticlePDF–2.2M
16.
Viroid-like colonists of human microbiomes
Ivan N. Zheludev, Robert C. Edgar, Maria Jose Lopez-Galiano, Marcos de la Peña, Artem Babaian, Ami S. Bhatt, Andrew Z. Fire
Version 1. bioRxiv. Preprint. 2024 Jan 21. doi: 10.1101/2024.01.20.576352
Published in:
Cell. 2024 Oct 23
PMCID:
PMC10827157
AbstractArticlePDF–8.6M
17.
Community‐scale models of microbiomes: Articulating metabolic modelling and metagenome sequencing
Klara Cerk, Pablo Ugalde‐Salas, Chabname Ghassemi Nedjad, Maxime Lecomte, Coralie Muller, David J. Sherman, Falk Hildebrand, Simon Labarthe, Clémence Frioux
Microb Biotechnol. 2024 Jan; 17(1): e14396. Published online 2024 Jan 20. doi: 10.1111/1751-7915.14396
PMCID:
PMC10832553
AbstractArticlePDF–5.4M
18.
Oral microbiome associated with differential ratios of Porphyromonas gingivalis and Streptococcus cristatus
Qingguo Wang, Bing-Yan Wang, Siddharth Pratap, Hua Xie
Microbiol Spectr. 2024 Feb; 12(2): e03482-23. Published online 2024 Jan 17. doi: 10.1128/spectrum.03482-23
PMCID:
PMC10846039
AbstractArticlePDF–1.7M
19.
Genesis of ectosymbiotic features based on commensalistic syntrophy
Nandakishor Krishnan, Villő Csiszár, Tamás F. Móri, József Garay
Sci Rep. 2024; 14: 1366. Published online 2024 Jan 16. doi: 10.1038/s41598-023-47211-8
PMCID:
PMC10791676
AbstractArticlePDF–3.4M
20.
Identification of promoter activity in gene-less cassettes from Vibrionaceae superintegrons
Paula Blanco, Alberto Hipólito, Lucía García-Pastor, Filipa Trigo da Roza, Laura Toribio-Celestino, Alba Cristina Ortega, Ester Vergara, Álvaro San Millán, José Antonio Escudero
Nucleic Acids Res. 2024 Apr 12; 52(6): 2961–2976. Published online 2024 Jan 12. doi: 10.1093/nar/gkad1252
PMCID:
PMC11014356
AbstractArticlePDF–1.8M

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