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Items: 11

Select item 75689461.

Optimizing open data to support one health: best practices to ensure interoperability of genomic data from bacterial pathogens

Ruth E. Timme, William J. Wolfgang, Maria Balkey, Sai Laxmi Gubbala Venkata, Robyn Randolph, Marc Allard, Errol Strain

One Health Outlook. 2020; 2: 20. Published online 2020 Oct 19. doi: 10.1186/s42522-020-00026-3

PMCID:: PMC7568946

Abstract Article PDF–1.7M

Select item 75161602.

Draft Genome Sequences of Isolates of Diverse Host Origin from the E. coli Reference Center at Penn State University

David W. Lacher, Mark K. Mammel, Jayanthi Gangiredla, Solomon T. Gebru, Tammy J. Barnaba, Sydney A. Majowicz, Edward G. Dudley

Microbiol Resour Announc. 2020 Sep; 9(39): e01005-20. Published online 2020 Sep 24. doi: 10.1128/MRA.01005-20

PMCID:: PMC7516160

Abstract Article PDF–155K

Select item 62847313.

Draft Genome Sequences of 72 Isolates from All Four Species of Shigella

Jayanthi Gangiredla, Mark K. Mammel, David W. Lacher, Carmen Tartera, Scott A. Jackson, Isha R. Patel, Christopher A. Elkins, Amit Mukherjee

Microbiol Resour Announc. 2018 Nov; 7(21): e01399-18. Published online 2018 Nov 29. doi: 10.1128/MRA.01399-18

PMCID:: PMC6284731

Abstract Article PDF–151K

Select item 62566464.

Draft Genome Sequences of the Escherichia coli Reference (ECOR) Collection

Isha R. Patel, Jayanthi Gangiredla, Mark K. Mammel, Keith A. Lampel, Christopher A. Elkins, David W. Lacher

Microbiol Resour Announc. 2018 Oct; 7(14): e01133-18. Published online 2018 Oct 11. doi: 10.1128/MRA.01133-18

PMCID:: PMC6256646

Abstract Article PDF–181K

Select item 59409545.

Draft Genome Sequences of Escherichia albertii, Escherichia fergusonii, and Strains Belonging to Six Cryptic Lineages of Escherichia spp.

Jayanthi Gangiredla, Mark K. Mammel, Tammy J. Barnaba, Carmen Tartera, Solomon T. Gebru, Isha R. Patel, Susan R. Leonard, Michael L. Kotewicz, Keith A. Lampel, Christopher A. Elkins, David W. Lacher

Genome Announc. 2018 May; 6(18): e00271-18. Published online 2018 May 3. doi: 10.1128/genomeA.00271-18

PMCID:: PMC5940954

Abstract Article PDF–123K

Select item 57306716.

Species-Wide Collection of Escherichia coli Isolates for Examination of Genomic Diversity

Jayanthi Gangiredla, Mark K. Mammel, Tammy J. Barnaba, Carmen Tartera, Solomon T. Gebru, Isha R. Patel, Susan R. Leonard, Michael L. Kotewicz, Keith A. Lampel, Christopher A. Elkins, David W. Lacher

Genome Announc. 2017 Dec; 5(50): e01321-17. Published online 2017 Dec 14. doi: 10.1128/genomeA.01321-17

PMCID:: PMC5730671

Abstract Article PDF–124K

Select item 55412157.

Prevalence and Genomic Characterization of Escherichia coli O157:H7 in Cow-Calf Herds throughout California

Jay N. Worley, Kristopher A. Flores, Xun Yang, Jennifer A. Chase, Guojie Cao, Shuai Tang, Jianghong Meng, Edward R. Atwill

Appl Environ Microbiol. 2017 Aug 15; 83(16): e00734-17. Prepublished online 2017 May 26. Published online 2017 Aug 1. doi: 10.1128/AEM.00734-17

PMCID:: PMC5541215

Abstract Article PDF–1.3M

Select item 50280478.

Identification and Characterization of Cefotaxime Resistant Bacteria in Beef Cattle

Raies A. Mir, Thomas A. Weppelmann, Judith A. Johnson, Douglas Archer, J. Glenn Morris, Jr, KwangCheol Casey Jeong

PLoS One. 2016; 11(9): e0163279. Published online 2016 Sep 19. doi: 10.1371/journal.pone.0163279

PMCID:: PMC5028047

Abstract Article PDF–1.7M

Select item 48242689.

Draft Genome Sequence of an Escherichia coli O8:H19 Sequence Type 708 Strain Isolated from a Holstein Dairy Cow with Metritis

Amber Ginn, Zhengxin Ma, Klibs N. Galvao, KwangCheol Casey Jeong

Genome Announc. 2016 Mar-Apr; 4(2): e00261-16. Published online 2016 Apr 7. doi: 10.1128/genomeA.00261-16

PMCID:: PMC4824268

Abstract Article PDF–137K

Select item 459129810.

Genome Sequences of 64 Non-O157:H7 Shiga Toxin-Producing Escherichia coli Strains

Magaly Toro, Guojie Cao, Lydia Rump, T. G. Nagaraja, Jianghong Meng, Narjol Gonzalez-Escalona

Genome Announc. 2015 Sep-Oct; 3(5): e01067-15. Published online 2015 Oct 1. doi: 10.1128/genomeA.01067-15

PMCID:: PMC4591298

Abstract Article PDF–176K

Select item 379009911.

Draft Genome Sequences of Two O104:H21 Escherichia coli Isolates Causing Hemorrhagic Colitis during a 1994 Montana Outbreak Provide Insight into Their Pathogenicity

Narjol Gonzalez-Escalona, Melinda A. McFarland, Lydia V. Rump, Justin Payne, Denis Andrzejewski, Eric W. Brown, Peter S. Evans, Timothy R. Croley

Genome Announc. 2013 Sep-Oct; 1(5): e00805-13. Published online 2013 Oct 3. doi: 10.1128/genomeA.00805-13

PMCID:: PMC3790099

Abstract Article PDF–135K

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