PMC Links for GEO DataSets (Select 200005350) - PMC - NCBI

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Items: 4

Select item 42908281.

An investigation of biomarkers derived from legacy microarray data for their utility in the RNA-seq era

Zhenqiang Su, Hong Fang, Huixiao Hong, Leming Shi, Wenqian Zhang, Wenwei Zhang, Yanyan Zhang, Zirui Dong, Lee J Lancashire, Marina Bessarabova, Xi Yang, Baitang Ning, Binsheng Gong, Joe Meehan, Joshua Xu, Weigong Ge, Roger Perkins, Matthias Fischer, Weida Tong

Genome Biol. 2014; 15(12): 3273. Published online 2014 Dec 3. doi: 10.1186/s13059-014-0523-y

PMCID:: PMC4290828

Abstract Article PDF–2.1M

Select item 41603742.

Detecting and correcting systematic variation in large-scale RNA sequencing data

Sheng Li, Pawel P. Labaj, Paul Zumbo, Peter Sykacek, Wei Shi, Leming Shi, John Phan, Leo Wu, May Wang, Charles Wang, Danielle Thierry-Mieg, Jean Thierry-Mieg, David P. Kreil, Christopher E. Mason

Nat Biotechnol. Author manuscript; available in PMC 2015 Mar 1.

Published in final edited form as: Nat Biotechnol. 2014 Sep; 32(9): 888–895. Published online 2014 Aug 24. doi: 10.1038/nbt.3000

PMCID:: PMC4160374

Abstract Article PDF–2.3M

Select item 32720783.

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

MAQC Consortium

Nat Biotechnol. Author manuscript; available in PMC 2012 Feb 3.

Published in final edited form as: Nat Biotechnol. 2006 Sep; 24(9): 1151–1161. doi: 10.1038/nbt1239

PMCID:: PMC3272078

Abstract Article PDF–2.1M

Select item 30263574.

Evaluation of gene expression data generated from expired Affymetrix GeneChip^® microarrays using MAQC reference RNA samples

Zhining Wen, Charles Wang, Quan Shi, Ying Huang, Zhenqiang Su, Huixiao Hong, Weida Tong, Leming Shi

BMC Bioinformatics. 2010; 11(Suppl 6): S10. Published online 2010 Oct 7. doi: 10.1186/1471-2105-11-S6-S10

PMCID:: PMC3026357

Abstract Article PDF–1.5M

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