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Select item 105708521.

The deubiquitinase ZRANB1 is an E3 ubiquitin ligase for SLC7A11 and regulates ferroptotic resistance

Shan Huang, Qimin Zhang, Manyu Zhao, Xing Wang, Yilei Zhang, Boyi Gan, Peijing Zhang

J Cell Biol. 2023 Nov 6; 222(11): e202212072. Published online 2023 Oct 13. doi: 10.1083/jcb.202212072

PMCID:: PMC10570852

Abstract Article PDF–8.6M

Select item 107237932.

Trabid patient mutations impede the axonal trafficking of adenomatous polyposis coli to disrupt neurite growth

Daniel Frank, Maria Bergamasco, Michael J Mlodzianoski, Andrew Kueh, Ellen Tsui, Cathrine Hall, Georgios Kastrappis, Anne Kathrin Voss, Catriona McLean, Maree Faux, Kelly L Rogers, Bang Tran, Elizabeth Vincan, David Komander, Grant Dewson, Hoanh Tran

eLife. 2023; 12: RP90796. Published online 2023 Dec 15. doi: 10.7554/eLife.90796

PMCID:: PMC10723793

Abstract Article PDF–12M

Select item 85693473.

Deubiquitinase ZRANB1 drives hepatocellular carcinoma progression through SP1-LOXL2 axis

Qing Li, Qing Chao, Yue Liu, Jiayu Fang, Jing Xie, Jing Zhen, Yongqi Ding, Bidong Fu, Yun Ke, Fan Xiao, Honghu Wu, Zhaoxia Huang, Haibin Hao, Da Huang

Am J Cancer Res. 2021; 11(10): 4807–4825. Published online 2021 Oct 15.

PMCID:: PMC8569347

Abstract Article PDF–5.2M

Select item 52609454.

An Ankyrin-repeat ubiquitin binding domain determines TRABID’s specificity for atypical ubiquitin chains

Julien D.F. Licchesi, Juliusz Mieszczanek, Tycho E.T. Mevissen, Trevor J. Rutherford, Masato Akutsu, Satpal Virdee, Farid El Oualid, Jason W. Chin, Huib Ovaa, Mariann Bienz, David Komander

Nat Struct Mol Biol. Author manuscript; available in PMC 2017 Jan 24.

Published in final edited form as: Nat Struct Mol Biol. 2011 Dec 11; 19(1): 62–71. Published online 2011 Dec 11. doi: 10.1038/nsmb.2169

PMCID:: PMC5260945

Abstract Article PDF–2.8M

Select item 100661905.

TRABID overexpression enables synthetic lethality to PARP inhibitor via prolonging 53BP1 retention at double-strand breaks

Jian Ma, Yingke Zhou, Penglin Pan, Haixin Yu, Zixi Wang, Lei Lily Li, Bing Wang, Yuqian Yan, Yunqian Pan, Qi Ye, Tianjie Liu, Xiaoyu Feng, Shan Xu, Ke Wang, Xinyang Wang, Yanlin Jian, Bohan Ma, Yizeng Fan, Yang Gao, Haojie Huang, Lei Li

Nat Commun. 2023; 14: 1810. Published online 2023 Mar 31. doi: 10.1038/s41467-023-37499-5

PMCID:: PMC10066190

Abstract Article PDF–5.6M

Select item 63298256.

Trabid inhibits hepatocellular carcinoma growth and metastasis by cleaving RNF8-induced K63 ubiquitination of Twist1

Yuekun Zhu, Chao Qu, Xuehui Hong, Yanyan Jia, Meihua Lin, Yunmei Luo, Fengqin Lin, Xiaolong Xie, Xiaoqi Xie, Juan Huang, Qin Wu, Xingfeng Qiu, Daxun Piao, Yanwei Xing, Tian Yu, Yuanfu Lu, Qiang Huang, Changyin Yu, Junfei Jin, Zhiyong Zhang

Cell Death Differ. 2019 Feb; 26(2): 306–320. Published online 2018 May 10. doi: 10.1038/s41418-018-0119-2

PMCID:: PMC6329825

Abstract Article PDF–6.8M

Select item 79105807.

VPS34 K29/K48 branched ubiquitination governed by UBE3C and TRABID regulates autophagy, proteostasis and liver metabolism

Yu-Hsuan Chen, Tzu-Yu Huang, Yu-Tung Lin, Shu-Yu Lin, Wen-Hsin Li, Hsiang-Jung Hsiao, Ruei-Liang Yan, Hong-Wen Tang, Zhao-Qing Shen, Guang-Chao Chen, Kuen-Phon Wu, Ting-Fen Tsai, Ruey-Hwa Chen

Nat Commun. 2021; 12: 1322. Published online 2021 Feb 26. doi: 10.1038/s41467-021-21715-1

PMCID:: PMC7910580

Abstract Article PDF–4.2M

Select item 12219928.

Isolation and characterization of two novel A20-like proteins.

P C Evans, E R Taylor, J Coadwell, K Heyninck, R Beyaert, P J Kilshaw

Biochem J. 2001 Aug 1; 357(Pt 3): 617–623. doi: 10.1042/0264-6021:3570617

PMCID:: PMC1221992

Summary PDF–275K

Select item 43866409.

K29-Selective Ubiquitin Binding Domain Reveals Structural Basis of Specificity and Heterotypic Nature of K29 Polyubiquitin

Yosua Adi Kristariyanto, Syed Arif Abdul Rehman, David G. Campbell, Nicholas A. Morrice, Clare Johnson, Rachel Toth, Yogesh Kulathu

Mol Cell. 2015 Apr 2; 58(1): 83–94. doi: 10.1016/j.molcel.2015.01.041

PMCID:: PMC4386640

Abstract Article

Select item 593387510.

ZRANB1 Is an EZH2 Deubiquitinase and a Potential Therapeutic Target in Breast Cancer

Peijing Zhang, Zhenna Xiao, Shouyu Wang, Mutian Zhang, Yongkun Wei, Qinglei Hang, Jongchan Kim, Fan Yao, Cristian Rodriguez-Aguayo, Baochau N. Ton, Minjung Lee, Yumeng Wang, Zhicheng Zhou, Liyong Zeng, Xiaoyu Hu, Sarah E. Lawhon, Ashley N. Siverly, Xiaohua Su, Jia Li, Xiaoping Xie, Xuhong Cheng, Liang-Chiu Liu, Hui-Wen Chang, Shu-Fen Chiang, Gabriel Lopez-Berestein, Anil K. Sood, Junjie Chen, M. James You, Shao-Cong Sun, Han Liang, Yun Huang, Xianbin Yang, Deqiang Sun, Yutong Sun, Mien-Chie Hung, Li Ma

Cell Rep. Author manuscript; available in PMC 2018 May 3.

Published in final edited form as: Cell Rep. 2018 Apr 17; 23(3): 823–837. doi: 10.1016/j.celrep.2018.03.078

PMCID:: PMC5933875

Abstract Article PDF–2.0M

Select item 438603111.

Assembly and Specific Recognition of K29- and K33-Linked Polyubiquitin

Martin A. Michel, Paul R. Elliott, Kirby N. Swatek, Michal Simicek, Jonathan N. Pruneda, Jane L. Wagstaff, Stefan M.V. Freund, David Komander

Mol Cell. 2015 Apr 2; 58(1): 95–109. doi: 10.1016/j.molcel.2015.01.042

PMCID:: PMC4386031

Abstract Article

Select item 605163712.

Ubiquitination of alpha-synuclein filaments by Nedd4 ligases

Thomas Mund, Masami Masuda-Suzukake, Michel Goedert, Hugh R. Pelham

PLoS One. 2018; 13(7): e0200763. Published online 2018 Jul 18. doi: 10.1371/journal.pone.0200763

Correction in:: PLoS One. 2018; 13(8): e0202158.

PMCID:: PMC6051637

Abstract Article PDF–16M

Select item 356763013.

HectD1 E3 Ligase Modifies Adenomatous Polyposis Coli (APC) with Polyubiquitin to Promote the APC-Axin Interaction

Hoanh Tran, Daisy Bustos, Ronald Yeh, Bonnee Rubinfeld, Cynthia Lam, Stephanie Shriver, Inna Zilberleyb, Michelle W. Lee, Lilian Phu, Anjali A. Sarkar, Irene E. Zohn, Ingrid E. Wertz, Donald S. Kirkpatrick, Paul Polakis

J Biol Chem. 2013 Feb 8; 288(6): 3753–3767. Published online 2012 Dec 31. doi: 10.1074/jbc.M112.415240

PMCID:: PMC3567630

Abstract Article PDF–3.0M

Select item 268087614.

Molecular discrimination of structurally equivalent Lys 63-linked and linear polyubiquitin chains

David Komander, Francisca Reyes-Turcu, Julien D F Licchesi, Peter Odenwaelder, Keith D Wilkinson, David Barford

EMBO Rep. 2009 May; 10(5): 466–473. Published online 2009 Apr 17. doi: 10.1038/embor.2009.55

Correction in:: EMBO Rep. 2009 Jun; 10(6): 662.

PMCID:: PMC2680876

Abstract Article PDF–1.0M

Select item 291778215.

Lys11-linked ubiquitin chains adopt compact conformations and are preferentially hydrolyzed by the deubiquitinase Cezanne

Anja Bremm, Stefan M.V. Freund, David Komander

Nat Struct Mol Biol. Author manuscript; available in PMC 2011 Feb 1.

Published in final edited form as: Nat Struct Mol Biol. 2010 Aug; 17(8): 939–947. Published online 2010 Jul 11. doi: 10.1038/nsmb.1873

PMCID:: PMC2917782

Abstract Article PDF–2.1M

Select item 223867316.

Trabid, a new positive regulator of Wnt-induced transcription with preference for binding and cleaving K63-linked ubiquitin chains

Hoanh Tran, Fumihiko Hamada, Thomas Schwarz-Romond, Mariann Bienz

Genes Dev. 2008 Feb 15; 22(4): 528–542. doi: 10.1101/gad.463208

PMCID:: PMC2238673

Abstract Article PDF–1.0M

Select item 661383817.

Ubiquitination of UVRAG by SMURF1 promotes autophagosome maturation and inhibits hepatocellular carcinoma growth

Xing Feng, Yanyan Jia, Yuyu Zhang, Fei Ma, Yuekun Zhu, Xuehui Hong, Qingxin Zhou, Ruixing He, Heng Zhang, Junfei Jin, Daxun Piao, He Huang, Qinghua Li, Xingfeng Qiu, Zhiyong Zhang

Autophagy. 2019; 15(7): 1130–1149. Published online 2019 Jan 27. doi: 10.1080/15548627.2019.1570063

PMCID:: PMC6613838

Abstract Article PDF–10M

Select item 694334618.

USP37 is a SNAI1 deubiquitinase

Zhenna Xiao, Liang Chang, Jongchan Kim, Peijing Zhang, Qinglei Hang, Shannon Yap, Youming Guo, Zhicheng Zhou, Liyong Zeng, Xiaoyu Hu, Ashley Siverly, Yutong Sun, Li Ma

Am J Cancer Res. 2019; 9(12): 2749–2759. Published online 2019 Dec 1.

PMCID:: PMC6943346

Abstract Article PDF–1.2M

Select item 433911919.

Ubiquitin Ser65 phosphorylation affects ubiquitin structure, chain assembly and hydrolysis

Tobias Wauer, Kirby N Swatek, Jane L Wagstaff, Christina Gladkova, Jonathan N Pruneda, Martin A Michel, Malte Gersch, Christopher M Johnson, Stefan MV Freund, David Komander

EMBO J. 2015 Feb 3; 34(3): 307–325. Published online 2014 Dec 20. doi: 10.15252/embj.201489847

PMCID:: PMC4339119

Abstract Article PDF–4.5M

Select item 370520820.

OTU Deubiquitinases Reveal Mechanisms of Linkage Specificity and Enable Ubiquitin Chain Restriction Analysis

Tycho E.T. Mevissen, Manuela K. Hospenthal, Paul P. Geurink, Paul R. Elliott, Masato Akutsu, Nadia Arnaudo, Reggy Ekkebus, Yogesh Kulathu, Tobias Wauer, Farid El Oualid, Stefan M.V. Freund, Huib Ovaa, David Komander

Cell. 2013 Jul 3; 154(1): 169–184. doi: 10.1016/j.cell.2013.05.046

PMCID:: PMC3705208

Abstract Article

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PMC Links for Gene (Select 54764) (39)
PMC
unnamed protein product [Homo sapiens]
unnamed protein product [Homo sapiens]
gi|45503788|emb|CAF86908.1|

Protein
RecName: Full=E3 ubiquitin-protein ligase pellino homolog 3; Short=Pellino-3
RecName: Full=E3 ubiquitin-protein ligase pellino homolog 3; Short=Pellino-3
gi|37999712|sp|Q8N2H9.2|PELI3_HUMAN

Protein
Rattus norvegicus CDC-like kinase 3 (Clk3), mRNA
Rattus norvegicus CDC-like kinase 3 (Clk3), mRNA
gi|1937369379|ref|NM_134340.2|

Nucleotide

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