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Items: 1 to 20 of 33

1.
Tos4 mediates gene expression homeostasis through interaction with HDAC complexes independently of H3K56 acetylation
Sophie L. Cooke, Barbara L. Soares, Carolin A. Müller, Conrad A. Nieduszynski, Francisco M. Bastos de Oliveira, Robertus A.M. de Bruin
J Biol Chem. 2021 Jan-Jun; 296: 100533. Published online 2021 Mar 11. doi: 10.1016/j.jbc.2021.100533
PMCID:
PMC8054192
AbstractArticlePDF–2.6M
2.
A Saccharomyces cerevisiae model and screen to define the functional consequences of oncogenic histone missense mutations
Laramie D Lemon, Sneha Kannan, Kim Wai Mo, Miranda Adams, Haley G Choi, Alexander O D Gulka, Elise S Withers, Hasset T Nurelegne, Valeria Gomez, Reina E Ambrocio, Rhea Tumminkatti, Richard S Lee, Morris Wan, Milo B Fasken, Jennifer M Spangle, Anita H Corbett
G3 (Bethesda) 2022 Jul; 12(7): jkac120. Published online 2022 May 14. doi: 10.1093/g3journal/jkac120
PMCID:
PMC9258546
AbstractArticlePDF–1.4M
3.
Linking DNA replication checkpoint to MBF cell-cycle transcription reveals a distinct class of G1/S genes
Francisco M Bastos de Oliveira, Michael R Harris, Pijus Brazauskas, Robertus A M de Bruin, Marcus B Smolka
EMBO J. 2012 Apr 4; 31(7): 1798–1810. Published online 2012 Feb 14. doi: 10.1038/emboj.2012.27
PMCID:
PMC3321206
AbstractArticlePDF–1.0M
4.
High Functional Overlap Between MluI Cell-Cycle Box Binding Factor and Swi4/6 Cell-Cycle Box Binding Factor in the G1/S Transcriptional Program in Saccharomyces cerevisiae
James M. Bean, Eric D. Siggia, Frederick R. Cross
Genetics. 2005 Sep; 171(1): 49–61. doi: 10.1534/genetics.105.044560
PMCID:
PMC1456534
AbstractArticlePDF–834K
5.
Regulation of a transcription factor network by Cdk1 coordinates late cell cycle gene expression
Benjamin D Landry, Claudine E Mapa, Heather E Arsenault, Kristin E Poti, Jennifer A Benanti
EMBO J. 2014 May 2; 33(9): 1044–1060. Published online 2014 Apr 8. doi: 10.1002/embj.201386877
PMCID:
PMC4193936
AbstractArticlePDF–2.2M
6.
Complex transcriptional circuitry at the G1/S transition in Saccharomyces cerevisiae
Christine E. Horak, Nicholas M. Luscombe, Jiang Qian, Paul Bertone, Stacy Piccirrillo, Mark Gerstein, Michael Snyder
Genes Dev. 2002 Dec 1; 16(23): 3017–3033. doi: 10.1101/gad.1039602
PMCID:
PMC187492
AbstractArticlePDF–815K
7.
Identification of Anaphase Promoting Complex Substrates in S. cerevisiae
Denis Ostapenko, Janet L. Burton, Mark J. Solomon
PLoS One. 2012; 7(9): e45895. Published online 2012 Sep 26. doi: 10.1371/journal.pone.0045895
PMCID:
PMC3458821
AbstractArticlePDF–774K
8.
Global analysis of phosphorylation and ubiquitylation crosstalk in protein degradation
Danielle L. Swaney, Pedro Beltrao, Lea Starita, Ailan Guo, John Rush, Stanley Fields, Nevan J. Krogan, Judit Villén
Nat Methods. Author manuscript; available in PMC 2014 Jul 1.
Published in final edited form as: Nat Methods. 2013 Jul; 10(7): 10.1038/nmeth.2519. Published online 2013 Jun 9. doi: 10.1038/nmeth.2519
PMCID:
PMC3868471
AbstractArticlePDF–1.3M
9.
Dynamics of Cdk1 Substrate Specificity during the Cell Cycle
Mardo Kõivomägi, Ervin Valk, Rainis Venta, Anna Iofik, Martin Lepiku, David O. Morgan, Mart Loog
Mol Cell. 2011 Jun 10; 42(5-4): 610–623. doi: 10.1016/j.molcel.2011.05.016
PMCID:
PMC3115021
AbstractArticle
10.
VID22 counteracts G-quadruplex-induced genome instability
Elena Galati, Maria C Bosio, Daniele Novarina, Matteo Chiara, Giulia M Bernini, Alessandro M Mozzarelli, Maria L García-Rubio, Belén Gómez-González, Andrés Aguilera, Thomas Carzaniga, Marco Todisco, Tommaso Bellini, Giulia M Nava, Gianmaria Frigè, Sarah Sertic, David S Horner, Anastasia Baryshnikova, Caterina Manzari, Anna M D’Erchia, Graziano Pesole, Grant W Brown, Marco Muzi-Falconi, Federico Lazzaro
Nucleic Acids Res. 2021 Dec 16; 49(22): 12785–12804. Published online 2021 Dec 6. doi: 10.1093/nar/gkab1156
PMCID:
PMC8682794
AbstractArticlePDF–8.0M
11.
Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment
Anna Shevchenko, Assen Roguev, Daniel Schaft, Luke Buchanan, Bianca Habermann, Cagri Sakalar, Henrik Thomas, Nevan J Krogan, Andrej Shevchenko, A Francis Stewart
Genome Biol. 2008; 9(11): R167. Published online 2008 Nov 28. doi: 10.1186/gb-2008-9-11-r167
PMCID:
PMC2614481
AbstractArticlePDF–920K
12.
Loss of Cardiolipin Leads to Perturbation of Acetyl-CoA Synthesis
Vaishnavi Raja, Amit S. Joshi, Guiling Li, Krishna Rao Maddipati, Miriam L. Greenberg
J Biol Chem. 2017 Jan 20; 292(3): 1092–1102. Published online 2016 Dec 9. doi: 10.1074/jbc.M116.753624
PMCID:
PMC5247643
AbstractArticlePDF–1.3M
13.
FACT interacts with Set3 HDAC and fine-tunes GAL1 transcription in response to environmental stimulation
He Leng, Shaofeng Liu, Yang Lei, Yuantao Tang, Shijia Gu, Jiazhi Hu, She Chen, Jianxun Feng, Qing Li
Nucleic Acids Res. 2021 Jun 4; 49(10): 5502–5519. Published online 2021 May 8. doi: 10.1093/nar/gkab312
PMCID:
PMC8191775
AbstractArticlePDF–3.0M
14.
Rewiring of Genetic Networks in Response to DNA Damage
Sourav Bandyopadhyay, Monika Mehta, Dwight Kuo, Min-Kyung Sung, Ryan Chuang, Eric J. Jaehnig, Bernd Bodenmiller, Katherine Licon, Wilbert Copeland, Michael Shales, Dorothea Fiedler, Janusz Dutkowski, Aude Guénolé, Haico van Attikum, Kevan M. Shokat, Richard D. Kolodner, Won-Ki Huh, Ruedi Aebersold, Michael-Christopher Keogh, Nevan J. Krogan, Trey Ideker
Science. Author manuscript; available in PMC 2010 Dec 21.
Published in final edited form as: Science. 2010 Dec 3; 330(6009): 1385–1389. doi: 10.1126/science.1195618
Correction in:
volume 331 on page 284
PMCID:
PMC3006187
AbstractArticlePDF–1.9M
15.
Functional Organization of the S. cerevisiae Phosphorylation Network
Dorothea Fiedler, Hannes Braberg, Monika Mehta, Gal Chechik, Gerard Cagney, Paromita Mukherjee, Andrea C. Silva, Michael Shales, Sean R. Collins, Sake van Wageningen, Patrick Kemmeren, Frank C. P. Holstege, Jonathan S. Weissman, Michael-Christopher Keogh, Daphne Koller, Kevan M. Shokat, Nevan J. Krogan
Cell. Author manuscript; available in PMC 2010 Apr 19.
Published in final edited form as: Cell. 2009 Mar 6; 136(5): 952–963. doi: 10.1016/j.cell.2008.12.039
PMCID:
PMC2856666
AbstractArticlePDF–3.9M
16.
The proteome of Saccharomyces cerevisiae mitochondria
Albert Sickmann, Jörg Reinders, Yvonne Wagner, Cornelia Joppich, René Zahedi, Helmut E. Meyer, Birgit Schönfisch, Inge Perschil, Agnieszka Chacinska, Bernard Guiard, Peter Rehling, Nikolaus Pfanner, Chris Meisinger
Proc Natl Acad Sci U S A. 2003 Nov 11; 100(23): 13207–13212. Published online 2003 Oct 23. doi: 10.1073/pnas.2135385100
PMCID:
PMC263752
AbstractArticlePDF–694K
17.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XII
M. Johnston, L. Hillier, L. Riles, other members of the Genome Sequencing Center, K. Albermann, B. André, W. Ansorge, V. Benes, M. Brückner, H. Delius, E. Dubois, A. Düsterhöft, K.-D. Entian, M. Floeth, A. Goffeau, U. Hebling, K. Heumann, D. Heuss-Neitzel, H. Hilbert, F. Hilger, K. Kleine, P. Kötter, E. J. Louis, F. Messenguy, H. W. Mewes, T. Miosga, D. Möstl, S. Müller-Auer, U. Nentwich, B. Obermaier, E. Piravandi, T. M. Pohl, D. Portetelle, B. Purnelle, S. Rechmann, M. Rieger, M. Rinke, M. Rose, M. Scharfe, B. Scherens, P. Scholler, C. Schwager, S. Schwarz, A. P. Underwood, L. A. Urrestarazu, M. Vandenbol, P. Verhasselt, F. Vierendeels, M Voet, G. Volckaert, H. Voss, R. Wambutt, E. Wedler, H. Wedler, F. K. Zimmermann, A. Zollner, J. Hani, J. D. Hoheisel
Nature. Author manuscript; available in PMC 2019 Jul 9.
Published in final edited form as: Nature. 1997 May 29; 387(6632 Suppl): 87–90.
PMCID:
PMC6615710
AbstractArticlePDF–424K
18.
Dissecting DNA damage response pathways by analyzing protein localization and abundance changes during DNA replication stress
Johnny M. Tkach, Askar Yimit, Anna Y. Lee, Michael Riffle, Michael Costanzo, Daniel Jaschob, Jason A. Hendry, Jiongwen Ou, Jason Moffat, Charles Boone, Trisha N. Davis, Corey Nislow, Grant W. Brown
Nat Cell Biol. Author manuscript; available in PMC 2013 Mar 1.
Published in final edited form as: Nat Cell Biol. 2012 Sep; 14(9): 966–976. Published online 2012 Jul 29. doi: 10.1038/ncb2549
PMCID:
PMC3434236
AbstractArticlePDF–1.5M
19.
A Functional Link Between Bir1 and the Saccharomyces cerevisiae Ctf19 Kinetochore Complex Revealed Through Quantitative Fitness Analysis
Vasso Makrantoni, Adam Ciesiolka, Conor Lawless, Josefin Fernius, Adele Marston, David Lydall, Michael J. R. Stark
G3 (Bethesda) 2017 Sep; 7(9): 3203–3215. Published online 2017 Jul 28. doi: 10.1534/g3.117.300089
PMCID:
PMC5592945
AbstractArticlePDF–1.7M
20.
Interrogation of γ-tubulin alleles using high-resolution fitness measurements reveals a distinct cytoplasmic function in spindle alignment
Kristian Shulist, Eric Yen, Susanne Kaitna, Allen Leary, Alexandra Decterov, Debarun Gupta, Jackie Vogel
Sci Rep. 2017; 7: 11398. Published online 2017 Sep 12. doi: 10.1038/s41598-017-11789-7
Correction in:
Sci Rep. 2018; 8: 2513.
PMCID:
PMC5595808
AbstractArticlePDF–5.9M

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