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Select item 5560151.

Reverse recruitment: The Nup84 nuclear pore subcomplex mediates Rap1/Gcr1/Gcr2 transcriptional activation

Balaraj B. Menon, Nayan J. Sarma, Satish Pasula, Stephen J. Deminoff, Kristine A. Willis, Kellie E. Barbara, Brenda Andrews, George M. Santangelo

Proc Natl Acad Sci U S A. 2005 Apr 19; 102(16): 5749–5754. Published online 2005 Apr 7. doi: 10.1073/pnas.0501768102

PMCID:: PMC556015

Abstract Article PDF–484K

Select item 62330582.

The ribosome receptors Mrx15 and Mba1 jointly organize cotranslational insertion and protein biogenesis in mitochondria

Braulio Vargas Möller-Hergt, Andreas Carlström, Katharina Stephan, Axel Imhof, Martin Ott

Mol Biol Cell. 2018 Oct 1; 29(20): 2386–2396. doi: 10.1091/mbc.E18-04-0227

PMCID:: PMC6233058

Abstract Article PDF–2.0M

Select item 31344423.

Defining the Specificity of Cotranslationally Acting Chaperones by Systematic Analysis of mRNAs Associated with Ribosome-Nascent Chain Complexes

Marta del Alamo, Daniel J. Hogan, Sebastian Pechmann, Veronique Albanese, Patrick O. Brown, Judith Frydman

PLoS Biol. 2011 Jul; 9(7): e1001100. Published online 2011 Jul 12. doi: 10.1371/journal.pbio.1001100

PMCID:: PMC3134442

Abstract Article PDF–3.7M

Select item 38610874.

The nuclear basket proteins Mlp1p and Mlp2p are part of a dynamic interactome including Esc1p and the proteasome

Mario Niepel, Kelly R. Molloy, Rosemary Williams, Julia C. Farr, Anne C. Meinema, Nicholas Vecchietti, Ileana M. Cristea, Brian T. Chait, Michael P. Rout, Caterina Strambio-De-Castillia

Mol Biol Cell. 2013 Dec 15; 24(24): 3920–3938. doi: 10.1091/mbc.E13-07-0412

PMCID:: PMC3861087

Abstract Article PDF–7.3M

Select item 22580065.

Annotating novel genes by integrating synthetic lethals and genomic information

Daniel Schöner, Markus Kalisch, Christian Leisner, Lukas Meier, Marc Sohrmann, Mahamadou Faty, Yves Barral, Matthias Peter, Wilhelm Gruissem, Peter Bühlmann

BMC Syst Biol. 2008; 2: 3. Published online 2008 Jan 14. doi: 10.1186/1752-0509-2-3

PMCID:: PMC2258006

Abstract Article PDF–523K

Select item 41498046.

Exploring the Yeast Acetylome Using Functional Genomics

Supipi Kaluarachchi Duffy, Helena Friesen, Anastasia Baryshnikova, Jean-Philippe Lambert, Yolanda T. Chong, Daniel Figeys, Brenda Andrews

Cell. Author manuscript; available in PMC 2014 Aug 30.

Published in final edited form as: Cell. 2012 May 11; 149(4): 936–948. doi: 10.1016/j.cell.2012.02.064

PMCID:: PMC4149804

Abstract Article PDF–2.1M

Select item 54737557.

Mapping the Synthetic Dosage Lethality Network of CDK1/CDC28

Christine Zimmermann, Ignacio Garcia, Manja Omerzu, Pierre Chymkowitch, Beibei Zhang, Jorrit M. Enserink

G3 (Bethesda) 2017 Jun; 7(6): 1753–1766. Published online 2017 Apr 18. doi: 10.1534/g3.117.042317

Correction in:: G3 (Bethesda). 2019 Aug; 9(8): 2787.

PMCID:: PMC5473755

Abstract Article PDF–2.7M

Select item 30709388.

Diverse protein kinase interactions identified by protein microarrays reveal novel connections between cellular processes

Joseph Fasolo, Andrea Sboner, Mark G.F. Sun, Haiyuan Yu, Rui Chen, Donald Sharon, Philip M. Kim, Mark Gerstein, Michael Snyder

Genes Dev. 2011 Apr; 25(7): 767–778. doi: 10.1101/gad.1998811

PMCID:: PMC3070938

Abstract Article PDF–1.2M

Select item 44318109.

The 4E-BP Caf20p Mediates Both eIF4E-Dependent and Independent Repression of Translation

Lydia M. Castelli, David Talavera, Christopher J. Kershaw, Sarah S. Mohammad-Qureshi, Joseph L. Costello, William Rowe, Paul F. G. Sims, Christopher M. Grant, Simon J. Hubbard, Mark P. Ashe, Graham D. Pavitt

PLoS Genet. 2015 May; 11(5): e1005233. Published online 2015 May 14. doi: 10.1371/journal.pgen.1005233

PMCID:: PMC4431810

Abstract Article PDF–5.5M

Select item 343423610.

Dissecting DNA damage response pathways by analyzing protein localization and abundance changes during DNA replication stress

Johnny M. Tkach, Askar Yimit, Anna Y. Lee, Michael Riffle, Michael Costanzo, Daniel Jaschob, Jason A. Hendry, Jiongwen Ou, Jason Moffat, Charles Boone, Trisha N. Davis, Corey Nislow, Grant W. Brown

Nat Cell Biol. Author manuscript; available in PMC 2013 Mar 1.

Published in final edited form as: Nat Cell Biol. 2012 Sep; 14(9): 966–976. Published online 2012 Jul 29. doi: 10.1038/ncb2549

PMCID:: PMC3434236

Abstract Article PDF–1.5M

Select item 1110948311.

K48- and K63-linked ubiquitin chain interactome reveals branch- and length-specific ubiquitin interactors

Anita Waltho, Oliver Popp, Christopher Lenz, Lukas Pluska, Mahil Lambert, Volker Dötsch, Philipp Mertins, Thomas Sommer

Life Sci Alliance. 2024 Aug; 7(8): e202402740. Published online 2024 May 21. doi: 10.26508/lsa.202402740

PMCID:: PMC11109483

Abstract Article PDF–2.9M

Select item 1029770012.

The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions

Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman

Mol Cell. Author manuscript; available in PMC 2024 Jun 15.

Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021

PMCID:: PMC10297700

Abstract Article PDF–2.0M

Select item 274675313.

High Quality Binary Protein Interaction Map of the Yeast Interactome Network

Haiyuan Yu, Pascal Braun, Muhammed A. Yildirim, Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amélie Dricot, Alexei Vazquez, Ryan R. Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E. Hudson, Juyong Park, Xiaofeng Xin, Michael E. Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P. Roth, Albert-László Barabási, Jan Tavernier, David E. Hill, Marc Vidal

Science. Author manuscript; available in PMC 2009 Sep 18.

Published in final edited form as: Science. 2008 Oct 3; 322(5898): 104–110. Published online 2008 Aug 21. doi: 10.1126/science.1158684

PMCID:: PMC2746753

Abstract Article PDF–2.2M

Select item 564803214.

Architecture and dynamics of overlapped RNA regulatory networks

Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens

RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117

PMCID:: PMC5648032

Abstract Article PDF–6.6M

Select item 331716015.

Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs

Sara Sharifpoor, Dewald van Dyk, Michael Costanzo, Anastasia Baryshnikova, Helena Friesen, Alison C. Douglas, Ji-Young Youn, Benjamin VanderSluis, Chad L. Myers, Balázs Papp, Charles Boone, Brenda J. Andrews

Genome Res. 2012 Apr; 22(4): 791–801. doi: 10.1101/gr.129213.111

PMCID:: PMC3317160

Abstract Article PDF–998K

Select item 355349716.

The cotranslational function of ribosome-associated Hsp70 in eukaryotic protein homeostasis

Felix Willmund, Marta del Alamo, Sebastian Pechmann, Taotao Chen, Veronique Albanese, Eric B. Dammer, Junmin Peng, Judith Frydman

Cell. Author manuscript; available in PMC 2014 Jan 17.

Published in final edited form as: Cell. 2013 Jan 17; 152(1-2): 196–209. doi: 10.1016/j.cell.2012.12.001

PMCID:: PMC3553497

Abstract Article PDF–5.1M

Select item 520434817.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116