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Select item 50170171.

HyCCAPP as a tool to characterize promoter DNA-protein interactions in Saccharomyces cerevisiae

Hector Guillen-Ahlers, Prahlad K. Rao, Mark E. Levenstein, Julia Kennedy-Darling, Danu S. Perumalla, Avinash Y.L. Jadhav, Jeremy P. Glenn, Amy Ludwig-Kubinski, Eugene Drigalenko, Maria J. Montoya, Harald H. Göring, Corianna D. Anderson, Mark Scalf, Heidi I.S. Gildersleeve, Regina Cole, Alexandra M. Greene, Akua K. Oduro, Katarina Lazarova, Anthony J. Cesnik, Jared Barfknecht, Lisa A. Cirillo, Audrey P. Gasch, Michael R. Shortreed, Lloyd M. Smith, Michael Olivier

Genomics. Author manuscript; available in PMC 2017 Jun 1.

Published in final edited form as: Genomics. 2016 Jun; 107(6): 267–273. Published online 2016 May 13. doi: 10.1016/j.ygeno.2016.05.002

PMCID:: PMC5017017

Abstract Article PDF–1.1M

Select item 35946522.

A functional variomics tool for discovering drug resistance genes and drug targets

Zhiwei Huang, Kaifu Chen, Jianhuai Zhang, Yongxiang Li, Hui Wang, Dandan Cui, Jiangwu Tang, Yong Liu, Xiaomin Shi, Wei Li, Dan Liu, Rui Chen, Richard S. Sucgang, Xuewen Pan

Cell Rep. Author manuscript; available in PMC 2013 Mar 12.

Published in final edited form as: Cell Rep. 2013 Feb 21; 3(2): 577–585. Published online 2013 Feb 14. doi: 10.1016/j.celrep.2013.01.019

PMCID:: PMC3594652

Abstract Article PDF–1.7M

Select item 27689843.

Genome-wide deletion mutant analysis reveals genes required for respiratory growth, mitochondrial genome maintenance and mitochondrial protein synthesis in Saccharomyces cerevisiae

Sandra Merz, Benedikt Westermann

Genome Biol. 2009; 10(9): R95. Published online 2009 Sep 14. doi: 10.1186/gb-2009-10-9-r95

PMCID:: PMC2768984

Abstract Article PDF–1.8M

Select item 20636754.

Mdm38 interacts with ribosomes and is a component of the mitochondrial protein export machinery

Ann E. Frazier, Rebecca D. Taylor, David U. Mick, Bettina Warscheid, Nadine Stoepel, Helmut E. Meyer, Michael T. Ryan, Bernard Guiard, Peter Rehling

J Cell Biol. 2006 Feb 13; 172(4): 553–564. doi: 10.1083/jcb.200505060

PMCID:: PMC2063675

Abstract Article PDF–5.8M

Select item 100683365.

MitoStores: chaperone‐controlled protein granules store mitochondrial precursors in the cytosol

Lena Krämer, Niko Dalheimer, Markus Räschle, Zuzana Storchová, Jan Pielage, Felix Boos, Johannes M Herrmann

EMBO J. 2023 Apr; 42(7): e112309. Published online 2023 Jan 27. doi: 10.15252/embj.2022112309

PMCID:: PMC10068336

Abstract Article PDF–3.9M

Select item 14561806.

Diverse Functions of Spindle Assembly Checkpoint Genes in Saccharomyces cerevisiae

Jewel A. Daniel, Brice E. Keyes, Yvonne P. Y. Ng, C. Onyi Freeman, Daniel J. Burke

Genetics. 2006 Jan; 172(1): 53–65. doi: 10.1534/genetics.105.046441

PMCID:: PMC1456180

Abstract Article PDF–1.1M

Select item 33568287.

A genomic analysis of chronological longevity factors in budding yeast

Christopher R Burtner, Christopher J Murakami, Brady Olsen, Brian K Kennedy, Matt Kaeberlein

Cell Cycle. 2011 May 1; 10(9): 1385–1396. Published online 2011 May 1. doi: 10.4161/cc.10.9.15464

PMCID:: PMC3356828

Abstract Article PDF–3.2M

Select item 62330588.

The ribosome receptors Mrx15 and Mba1 jointly organize cotranslational insertion and protein biogenesis in mitochondria

Braulio Vargas Möller-Hergt, Andreas Carlström, Katharina Stephan, Axel Imhof, Martin Ott

Mol Biol Cell. 2018 Oct 1; 29(20): 2386–2396. doi: 10.1091/mbc.E18-04-0227

PMCID:: PMC6233058

Abstract Article PDF–2.0M

Select item 31344429.

Defining the Specificity of Cotranslationally Acting Chaperones by Systematic Analysis of mRNAs Associated with Ribosome-Nascent Chain Complexes

Marta del Alamo, Daniel J. Hogan, Sebastian Pechmann, Veronique Albanese, Patrick O. Brown, Judith Frydman

PLoS Biol. 2011 Jul; 9(7): e1001100. Published online 2011 Jul 12. doi: 10.1371/journal.pbio.1001100

PMCID:: PMC3134442

Abstract Article PDF–3.7M

Select item 524764310.

Loss of Cardiolipin Leads to Perturbation of Acetyl-CoA Synthesis

Vaishnavi Raja, Amit S. Joshi, Guiling Li, Krishna Rao Maddipati, Miriam L. Greenberg

J Biol Chem. 2017 Jan 20; 292(3): 1092–1102. Published online 2016 Dec 9. doi: 10.1074/jbc.M116.753624

PMCID:: PMC5247643

Abstract Article PDF–1.3M

Select item 712446611.

Improving Identification of In-organello Protein-Protein Interactions Using an Affinity-enrichable, Isotopically Coded, and Mass Spectrometry-cleavable Chemical Crosslinker

Karl A. T. Makepeace, Yassene Mohammed, Elena L. Rudashevskaya, Evgeniy V. Petrotchenko, F.-Nora Vögtle, Chris Meisinger, Albert Sickmann, Christoph H. Borchers

Mol Cell Proteomics. 2020 Apr; 19(4): 624–639. Published online 2020 Feb 12. doi: 10.1074/mcp.RA119.001839

PMCID:: PMC7124466

Abstract Article PDF–7.8M

Select item 957451412.

Elucidation of the interaction proteome of mitochondrial chaperone Hsp78 highlights its role in protein aggregation during heat stress

Witold Jaworek, Marc Sylvester, Giovanna Cenini, Wolfgang Voos

J Biol Chem. 2022 Oct; 298(10): 102494. Published online 2022 Sep 15. doi: 10.1016/j.jbc.2022.102494

PMCID:: PMC9574514

Abstract Article PDF–1.9M

Select item 308434513.

Srs2 overexpression reveals a helicase-independent role at replication forks that requires diverse cell functions

Ana María León Ortiz, Robert J. D. Reid, John C. Dittmar, Rodney Rothstein, Alain Nicolas

DNA Repair (Amst) Author manuscript; available in PMC 2012 May 5.

Published in final edited form as: DNA Repair (Amst). 2011 May 5; 10(5): 506–517. Published online 2011 Apr 1. doi: 10.1016/j.dnarep.2011.02.004

PMCID:: PMC3084345

Abstract Article PDF–3.2M

Select item 628012414.

Recruitment of Cytosolic J-Proteins by TOM Receptors Promotes Mitochondrial Protein Biogenesis

Łukasz Opaliński, Jiyao Song, Chantal Priesnitz, Lena-Sophie Wenz, Silke Oeljeklaus, Bettina Warscheid, Nikolaus Pfanner, Thomas Becker

Cell Rep. 2018 Nov 20; 25(8): 2036–2043.e5. Published online 2018 Nov 20. doi: 10.1016/j.celrep.2018.10.083

PMCID:: PMC6280124

Abstract Article

Select item 556293715.

Exploring Genetic Suppression Interactions on a Global Scale

Jolanda van Leeuwen, Carles Pons, Joseph C. Mellor, Takafumi N. Yamaguchi, Helena Friesen, John Koschwanez, Mojca Mattiazzi Ušaj, Maria Pechlaner, Mehmet Takar, Matej Ušaj, Benjamin VanderSluis, Kerry Andrusiak, Pritpal Bansal, Anastasia Baryshnikova, Claire Boone, Jessica Cao, Atina Cote, Marinella Gebbia, Gene Horecka, Ira Horecka, Elena Kuzmin, Nicole Legro, Wendy Liang, Natascha van Lieshout, Margaret McNee, Bryan-Joseph San Luis, Fatemeh Shaeri, Ermira Shuteriqi, Song Sun, Lu Yang, Ji-Young Youn, Michael Yuen, Michael Costanzo, Anne-Claude Gingras, Patrick Aloy, Chris Oostenbrink, Andrew Murray, Todd R. Graham, Chad L. Myers, Brenda J. Andrews, Frederick P. Roth, Charles Boone

Science. Author manuscript; available in PMC 2017 Aug 19.

Published in final edited form as: Science. 2016 Nov 4; 354(6312): aag0839. doi: 10.1126/science.aag0839

PMCID:: PMC5562937

Abstract Article PDF–2.5M

Select item 289520016.

The conserved bromo-adjacent homology domain of yeast Orc1 functions in the selection of DNA replication origins within chromatin

Philipp Müller, Sookhee Park, Erika Shor, Dana J. Huebert, Christopher L. Warren, Aseem Z. Ansari, Michael Weinreich, Matthew L. Eaton, David M. MacAlpine, Catherine A. Fox

Genes Dev. 2010 Jul 1; 24(13): 1418–1433. doi: 10.1101/gad.1906410

PMCID:: PMC2895200

Abstract Article PDF–1.0M

Select item 551937517.

Identification of karyopherins involved in the nuclear import of RNA exosome subunit Rrp6 in Saccharomyces cerevisiae

Fernando A. Gonzales-Zubiate, Ellen K. Okuda, Julia P. C. Da Cunha, Carla Columbano Oliveira

J Biol Chem. 2017 Jul 21; 292(29): 12267–12284. Published online 2017 May 24. doi: 10.1074/jbc.M116.772376

PMCID:: PMC5519375

Abstract Article PDF–3.2M

Select item 529564318.

The structure of the yeast mitochondrial ribosome

Nirupa Desai, Alan Brown, Alexey Amunts, V. Ramakrishnan

Science. Author manuscript; available in PMC 2017 Aug 3.

Published in final edited form as: Science. 2017 Feb 3; 355(6324): 528–531. doi: 10.1126/science.aal2415

PMCID:: PMC5295643

Abstract Article PDF–2.0M

Select item 417536519.

The Mitochondrial ADP/ATP Carrier Associates with the Inner Membrane Presequence Translocase in a Stoichiometric Manner

Carola S. Mehnert, Heike Rampelt, Michael Gebert, Silke Oeljeklaus, Sandra G. Schrempp, Lioba Kochbeck, Bernard Guiard, Bettina Warscheid, Martin van der Laan

J Biol Chem. 2014 Sep 26; 289(39): 27352–27362. Published online 2014 Aug 14. doi: 10.1074/jbc.M114.556498

PMCID:: PMC4175365

Abstract Article PDF–1.5M

Select item 751569420.

RNA-binding and prion domains: the Yin and Yang of phase separation

Nieves Lorenzo Gotor, Alexandros Armaos, Giulia Calloni, Marc Torrent Burgas, R Martin Vabulas, Natalia Sanchez De Groot, Gian Gaetano Tartaglia

Nucleic Acids Res. 2020 Sep 25; 48(17): 9491–9504. Published online 2020 Aug 28. doi: 10.1093/nar/gkaa681

PMCID:: PMC7515694

Abstract Article PDF–3.1M

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