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Select item 24232991.

Functions of Saccharomyces cerevisiae TFIIF during Transcription Start Site Utilization

Denys A. Khaperskyy, Michelle L. Ammerman, Robert C. Majovski, Alfred S. Ponticelli

Mol Cell Biol. 2008 Jun; 28(11): 3757–3766. Published online 2008 Mar 24. doi: 10.1128/MCB.02272-07

PMCID:: PMC2423299

Abstract Article PDF–681K

Select item 72656512.

Universal promoter scanning by Pol II during transcription initiation in Saccharomyces cerevisiae

Chenxi Qiu, Huiyan Jin, Irina Vvedenskaya, Jordi Abante Llenas, Tingting Zhao, Indranil Malik, Alex M. Visbisky, Scott L. Schwartz, Ping Cui, Pavel Čabart, Kang Hoo Han, William K. M. Lai, Richard P. Metz, Charles D. Johnson, Sing-Hoi Sze, B. Franklin Pugh, Bryce E. Nickels, Craig D. Kaplan

Genome Biol. 2020; 21: 132. Published online 2020 Jun 2. doi: 10.1186/s13059-020-02040-0

PMCID:: PMC7265651

Abstract Article PDF–5.1M

Select item 39482763.

Transcription factors IIS and IIF enhance transcription efficiency by differentially modifying RNA polymerase pausing dynamics

Toyotaka Ishibashi, Manchuta Dangkulwanich, Yves Coello, Troy A. Lionberger, Lucyna Lubkowska, Alfred S. Ponticelli, Mikhail Kashlev, Carlos Bustamante

Proc Natl Acad Sci U S A. 2014 Mar 4; 111(9): 3419–3424. Published online 2014 Feb 18. doi: 10.1073/pnas.1401611111

PMCID:: PMC3948276

Abstract Article PDF–1.0M

Select item 28291614.

Position of the general transcription factor TFIIF within the RNA polymerase II transcription preinitiation complex

Jesse Eichner, Hung-Ta Chen, Linda Warfield, Steven Hahn

EMBO J. 2010 Feb 17; 29(4): 706–716. Published online 2009 Dec 24. doi: 10.1038/emboj.2009.386

PMCID:: PMC2829161

Abstract Article PDF–2.0M

Select item 15697165.

Genetic Interactions Between TFIIF and TFIIS

Rachel N. Fish, Michelle L. Ammerman, Judith K. Davie, Betty F. Lu, Cindy Pham, LeAnn Howe, Alfred S. Ponticelli, Caroline M. Kane

Genetics. 2006 Aug; 173(4): 1871–1884. doi: 10.1534/genetics.106.058834

PMCID:: PMC1569716

Abstract Article PDF–678K

Select item 12013346.

Evidence that the Tfg1/Tfg2 dimer interface of TFIIF lies near the active center of the RNA polymerase II initiation complex

M. Angeles Freire-Picos, Shankarling Krishnamurthy, Zu-Wen Sun, Michael Hampsey

Nucleic Acids Res. 2005; 33(16): 5045–5052. Published online 2005 Sep 7. doi: 10.1093/nar/gki825

PMCID:: PMC1201334

Abstract Article PDF–414K

Select item 5339967.

Amino Acid Substitutions in Yeast TFIIF Confer Upstream Shifts in Transcription Initiation and Altered Interaction with RNA Polymerase II

Mohamed A. Ghazy, Seth A. Brodie, Michelle L. Ammerman, Lynn M. Ziegler, Alfred S. Ponticelli

Mol Cell Biol. 2004 Dec; 24(24): 10975–10985. doi: 10.1128/MCB.24.24.10975-10985.2004

PMCID:: PMC533996

Abstract Article PDF–529K

Select item 85894498.

Ssl2/TFIIH function in transcription start site scanning by RNA polymerase II in Saccharomyces cerevisiae

Tingting Zhao, Irina O Vvedenskaya, William KM Lai, Shrabani Basu, B Franklin Pugh, Bryce E Nickels, Craig D Kaplan

eLife. 2021; 10: e71013. Published online 2021 Oct 15. doi: 10.7554/eLife.71013

PMCID:: PMC8589449

Abstract Article PDF–10M

Select item 32557049.

Architecture of the Yeast RNA Polymerase II Open Complex and Regulation of Activity by TFIIF

James Fishburn, Steven Hahn

Mol Cell Biol. 2012 Jan; 32(1): 12–25. doi: 10.1128/MCB.06242-11

PMCID:: PMC3255704

Abstract Article PDF–2.8M

Select item 270883810.

Kap104p Imports the PY-NLS-containing Transcription Factor Tfg2p into the Nucleus

Katherine E. Süel, Yuh Min Chook

J Biol Chem. 2009 Jun 5; 284(23): 15416–15424. Published online 2009 Apr 13. doi: 10.1074/jbc.M809384200

PMCID:: PMC2708838

Abstract Article PDF–594K

Select item 341468711.

Architecture of the RNA polymerase II preinitiation complex and mechanism of ATP-dependent promoter opening

Sebastian Grünberg, Linda Warfield, Steven Hahn

Nat Struct Mol Biol. Author manuscript; available in PMC 2013 Feb 1.

Published in final edited form as: Nat Struct Mol Biol. 2012 Aug; 19(8): 788–796. Published online 2012 Jul 1. doi: 10.1038/nsmb.2334

PMCID:: PMC3414687

Abstract Article PDF–1.8M

Select item 23184112.

Cdc73p and Paf1p are found in a novel RNA polymerase II-containing complex distinct from the Srbp-containing holoenzyme.

X Shi, M Chang, A J Wolf, C H Chang, A A Frazer-Abel, P A Wade, Z F Burton, J A Jaehning

Mol Cell Biol. 1997 Mar; 17(3): 1160–1169. doi: 10.1128/mcb.17.3.1160

PMCID:: PMC231841

Summary PDF–1.0M

Select item 429146613.

Relationships of RNA Polymerase II Genetic Interactors to Transcription Start Site Usage Defects and Growth in Saccharomyces cerevisiae

Huiyan Jin, Craig D. Kaplan

G3 (Bethesda) 2015 Jan; 5(1): 21–33. Published online 2014 Nov 6. doi: 10.1534/g3.114.015180

PMCID:: PMC4291466

Abstract Article PDF–2.3M

Select item 11603614.

A Complex Containing RNA Polymerase II, Paf1p, Cdc73p, Hpr1p, and Ccr4p Plays a Role in Protein Kinase C Signaling

Meiping Chang, Delores French-Cornay, Hua-ying Fan, Hannah Klein, Clyde L. Denis, Judith A. Jaehning

Mol Cell Biol. 1999 Feb; 19(2): 1056–1067. doi: 10.1128/mcb.19.2.1056

PMCID:: PMC116036

Abstract Article PDF–1.1M

Select item 282767915.

Improved methods for expression and purification of S. cerevisiae TFIIF and TFIIH; Identification of a functional E.coli promoter and internal translation initiation within the N-terminal coding region of the TFIIF TFG1 subunit

Chen Yang, Denys A. Khaperskyy, Min Hou, Alfred S. Ponticelli

Protein Expr Purif. Author manuscript; available in PMC 2011 Apr 1.

Published in final edited form as: Protein Expr Purif. 2010 Apr; 70(2): 172–178. Published online 2009 Oct 7. doi: 10.1016/j.pep.2009.09.021

PMCID:: PMC2827679

Abstract Article PDF–1.2M

Select item 34418016.

RNA Polymerase II (Pol II)-TFIIF and Pol II-Mediator Complexes: the Major Stable Pol II Complexes and Their Activity in Transcription Initiation and Reinitiation

P. Geetha Rani, Jeffrey A. Ranish, Steven Hahn

Mol Cell Biol. 2004 Feb; 24(4): 1709–1720. doi: 10.1128/MCB.24.4.1709-1720.2004

PMCID:: PMC344180

Abstract Article PDF–514K

Select item 281037617.

Architecture of the RNA polymerase II–TFIIF complex revealed by cross-linking and mass spectrometry

Zhuo Angel Chen, Anass Jawhari, Lutz Fischer, Claudia Buchen, Salman Tahir, Tomislav Kamenski, Morten Rasmussen, Laurent Lariviere, Jimi-Carlo Bukowski-Wills, Michael Nilges, Patrick Cramer, Juri Rappsilber

EMBO J. 2010 Feb 17; 29(4): 717–726. Published online 2010 Jan 21. doi: 10.1038/emboj.2009.401