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Select item 109175141.

Genetic screens in Saccharomyces cerevisiae identify a role for 40S ribosome recycling factors Tma20 and Tma22 in nonsense-mediated decay

Miguel Pacheco, Karole N D’Orazio, Laura N Lessen, Anthony J Veltri, Zachary Neiman, Raphael Loll-Krippleber, Grant W Brown, Rachel Green

G3 (Bethesda) 2024 Mar; 14(3): jkad295. Published online 2024 Jan 10. doi: 10.1093/g3journal/jkad295

PMCID:: PMC10917514

Abstract Article PDF–2.3M

Select item 81379272.

40S ribosome profiling reveals distinct roles for Tma20/Tma22 (MCT-1/DENR) and Tma64 (eIF2D) in 40S subunit recycling

David J. Young, Sezen Meydan, Nicholas R. Guydosh

Nat Commun. 2021; 12: 2976. Published online 2021 May 20. doi: 10.1038/s41467-021-23223-8

PMCID:: PMC8137927

Abstract Article PDF–2.0M

Select item 79939973.

Reprogramming of translation in yeast cells impaired for ribosome recycling favors short, efficiently translated mRNAs

Swati Gaikwad, Fardin Ghobakhlou, David J Young, Jyothsna Visweswaraiah, Hongen Zhang, Alan G Hinnebusch

eLife. 2021; 10: e64283. Published online 2021 Mar 25. doi: 10.7554/eLife.64283

PMCID:: PMC7993997

Abstract Article PDF–3.4M

Select item 86827874.

Elongating RNA polymerase II and RNA:DNA hybrids hinder fork progression and gene expression at sites of head-on replication-transcription collisions

Luca Zardoni, Eleonora Nardini, Alessandra Brambati, Chiara Lucca, Ramveer Choudhary, Federica Loperfido, Simone Sabbioneda, Giordano Liberi

Nucleic Acids Res. 2021 Dec 16; 49(22): 12769–12784. Published online 2021 Dec 8. doi: 10.1093/nar/gkab1146

PMCID:: PMC8682787

Abstract Article PDF–8.6M

Select item 27531685.

Yvh1 is required for a late maturation step in the 60S biogenesis pathway

Stefan Kemmler, Laura Occhipinti, Maria Veisu, Vikram Govind Panse

J Cell Biol. 2009 Sep 21; 186(6): 863–880. doi: 10.1083/jcb.200904111

PMCID:: PMC2753168

Abstract Article PDF–4.1M

Select item 21745316.

Yeast Screens Identify the RNA Polymerase II CTD and SPT5 as Relevant Targets of BRCA1 Interaction

Craig B. Bennett, Tammy J. Westmoreland, Carmel S. Verrier, Carrie A. B. Blanchette, Tiffany L. Sabin, Hemali P. Phatnani, Yuliya V. Mishina, Gudrun Huper, Alice L. Selim, Ernest R. Madison, Dominique D. Bailey, Adebola I. Falae, Alvaro Galli, John A. Olson, Jr, Arno L. Greenleaf, Jeffrey R. Marks

PLoS One. 2008; 3(1): e1448. Published online 2008 Jan 16. doi: 10.1371/journal.pone.0001448

PMCID:: PMC2174531

Abstract Article PDF–1.0M

Select item 14729047.

Systematic identification and functional screens of uncharacterized proteins associated with eukaryotic ribosomal complexes

Tracey C. Fleischer, Connie M. Weaver, K. Jill McAfee, Jennifer L. Jennings, Andrew J. Link

Genes Dev. 2006 May 15; 20(10): 1294–1307. doi: 10.1101/gad.1422006

PMCID:: PMC1472904

Abstract Article PDF–679K

Select item 43581418.

Differential Phosphorylation of a Regulatory Subunit of Protein Kinase CK2 by Target of Rapamycin Complex 1 Signaling and the Cdc-like Kinase Kns1

Manuel E. Sanchez-Casalongue, Jaehoon Lee, Aviva Diamond, Scott Shuldiner, Robyn D. Moir, Ian M. Willis

J Biol Chem. 2015 Mar 13; 290(11): 7221–7233. Published online 2015 Jan 28. doi: 10.1074/jbc.M114.626523

PMCID:: PMC4358141

Abstract Article PDF–2.1M

Select item 1411519.

Dual Roles for Spt5 in Pre-mRNA Processing and Transcription Elongation Revealed by Identification of Spt5-Associated Proteins

D. L. Lindstrom, S. L. Squazzo, N. Muster, T. A. Burckin, K. C. Wachter, C. A. Emigh, J. A. McCleery, J. R. Yates, III, G. A. Hartzog

Mol Cell Biol. 2003 Feb; 23(4): 1368–1378. doi: 10.1128/MCB.23.4.1368-1378.2003

PMCID:: PMC141151

Abstract Article PDF–328K

Select item 1064769910.

A Protein–Protein Interaction Analysis Suggests a Wide Range of New Functions for the p21-Activated Kinase (PAK) Ste20

Ifeoluwapo Matthew Joshua, Meng Lin, Ariestia Mardjuki, Alessandra Mazzola, Thomas Höfken

Int J Mol Sci. 2023 Nov; 24(21): 15916. Published online 2023 Nov 2. doi: 10.3390/ijms242115916

PMCID:: PMC10647699

Abstract Article PDF–5.4M

Select item 726171811.

Growth-Regulated Hsp70 Phosphorylation Regulates Stress Responses and Prion Maintenance

Chung-Hsuan Kao, Seung W. Ryu, Min J. Kim, Xuemei Wen, Oshadi Wimalarathne, Tanya T. Paull

Mol Cell Biol. 2020 Jun; 40(12): e00628-19. Prepublished online 2020 Mar 23. Published online 2020 May 28. doi: 10.1128/MCB.00628-19

PMCID:: PMC7261718

Abstract Article PDF–3.4M

Select item 368892512.

Unligated Okazaki Fragments Induce PCNA Ubiquitination and a Requirement for Rad59-Dependent Replication Fork Progression

Hai Dang Nguyen, Jordan Becker, Yee Mon Thu, Michael Costanzo, Elizabeth N. Koch, Stephanie Smith, Kyungjae Myung, Chad L. Myers, Charles Boone, Anja-Katrin Bielinsky

PLoS One. 2013; 8(6): e66379. Published online 2013 Jun 18. doi: 10.1371/journal.pone.0066379

PMCID:: PMC3688925

Abstract Article PDF–5.9M

Select item 383549213.

Mapping the functional yeast ABC transporter interactome

Jamie Snider, Asad Hanif, Mid Eum Lee, Ke Jin, Analyn R. Yu, Chris Graham, Matthew Chuk, Dunja Damjanovic, Marta Wierzbicka, Priscilla Tang, Dina Balderes, Victoria Wong, Matthew Jessulat, Katelyn D. Darowski, Bryan-Joseph San Luis, Igor Shevelev, Stephen L Sturley, Charles Boone, Jack F. Greenblatt, Zhaolei Zhang, Christian M. Paumi, Mohan Babu, Hay-Oak Park, Susan Michaelis, Igor Stagljar

Nat Chem Biol. Author manuscript; available in PMC 2014 Mar 1.

Published in final edited form as: Nat Chem Biol. 2013 Sep; 9(9): 565–572. Published online 2013 Jul 7. doi: 10.1038/nchembio.1293

PMCID:: PMC3835492

Abstract Article PDF–1.2M

Select item 988117614.

The S. cerevisiae m⁶A-reader Pho92 promotes timely meiotic recombination by controlling key methylated transcripts

Jérémy Scutenaire, Damien Plassard, Mélody Matelot, Tommaso Villa, Julie Zumsteg, Domenico Libri, Bertrand Séraphin

Nucleic Acids Res. 2023 Jan 25; 51(2): 517–535. Published online 2022 Aug 8. doi: 10.1093/nar/gkac640

PMCID:: PMC9881176

Abstract Article PDF–7.3M

Select item 361359015.

Genome-wide bimolecular fluorescence complementation analysis of SUMO interactome in yeast

Min-Kyung Sung, Gyubum Lim, Dae-Gwan Yi, Yeon Ji Chang, Eun Bin Yang, KiYoung Lee, Won-Ki Huh

Genome Res. 2013 Apr; 23(4): 736–746. doi: 10.1101/gr.148346.112

PMCID:: PMC3613590

Abstract Article PDF–1.7M

Select item 900791716.

Identification of 14-3-3 Proteins, Polo kinase, and RNA-binding protein Pes4 as Key Regulators of Meiotic Commitment in Budding Yeast

Janardan N. Gavade, Chris M. Puccia, S. Grace Herod, Jonathan C. Trinidad, Luke E. Berchowitz, Soni Lacefield

Curr Biol. Author manuscript; available in PMC 2023 Apr 11.

Published in final edited form as: Curr Biol. 2022 Apr 11; 32(7): 1534–1547.e9. Published online 2022 Mar 2. doi: 10.1016/j.cub.2022.02.022

PMCID:: PMC9007917

Abstract Article PDF–2.2M

Select item 45012517.

Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X.

F Galibert, D Alexandraki, A Baur, E Boles, N Chalwatzis, J C Chuat, F Coster, C Cziepluch, M De Haan, H Domdey, P Durand, K D Entian, M Gatius, A Goffeau, L A Grivell, A Hennemann, C J Herbert, K Heumann, F Hilger, C P Hollenberg, M E Huang, C Jacq, J C Jauniaux, C Katsoulou, L Karpfinger-Hartl, et al.

EMBO J. 1996 May 1; 15(9): 2031–2049.

PMCID:: PMC450125

Summary Page Browse PDF–3.6M

Select item 260095618.

A Genomewide Suppressor and Enhancer Analysis of cdc13-1 Reveals Varied Cellular Processes Influencing Telomere Capping in Saccharomyces cerevisiae

S. G. Addinall, M. Downey, M. Yu, M. K. Zubko, J. Dewar, A. Leake, J. Hallinan, O. Shaw, K. James, D. J. Wilkinson, A. Wipat, D. Durocher, D. Lydall

Genetics. 2008 Dec; 180(4): 2251–2266. doi: 10.1534/genetics.108.092577

PMCID:: PMC2600956

Abstract Article PDF–1.9M

Select item 307236819.

Quantitative Fitness Analysis Shows That NMD Proteins and Many Other Protein Complexes Suppress or Enhance Distinct Telomere Cap Defects

Stephen Gregory Addinall, Eva-Maria Holstein, Conor Lawless, Min Yu, Kaye Chapman, A. Peter Banks, Hien-Ping Ngo, Laura Maringele, Morgan Taschuk, Alexander Young, Adam Ciesiolka, Allyson Lurena Lister, Anil Wipat, Darren James Wilkinson, David Lydall

PLoS Genet. 2011 Apr; 7(4): e1001362. Published online 2011 Apr 7. doi: 10.1371/journal.pgen.1001362

PMCID:: PMC3072368

Abstract Article PDF–4.0M

Select item 289711420.

Cdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy

Batool Ossareh-Nazari, Mélanie Bonizec, Mickael Cohen, Svetlana Dokudovskaya, François Delalande, Christine Schaeffer, Alain Van Dorsselaer, Catherine Dargemont

EMBO Rep. 2010 Jul; 11(7): 548–554. Published online 2010 May 28. doi: 10.1038/embor.2010.74

PMCID:: PMC2897114

Abstract Article PDF–597K

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