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Items: 1 to 20 of 37

1.
Insight into the RNA Exosome Complex Through Modeling Pontocerebellar Hypoplasia Type 1b Disease Mutations in Yeast
Milo B. Fasken, Jillian S. Losh, Sara W. Leung, Sergine Brutus, Brittany Avin, Jillian C. Vaught, Jennifer Potter-Birriel, Taylor Craig, Graeme L. Conn, Katherine Mills-Lujan, Anita H. Corbett, Ambro van Hoof
Genetics. 2017 Jan; 205(1): 221–237. Published online 2016 Oct 24. doi: 10.1534/genetics.116.195917
PMCID:
PMC5223504
AbstractArticlePDF–12M
2.
Structural and biochemical characterization of the yeast exosome component Rrp40
Anna Oddone, Esben Lorentzen, Jerome Basquin, Alexander Gasch, Vladimir Rybin, Elena Conti, Michael Sattler
EMBO Rep. 2007 Jan; 8(1): 63–69. Published online 2006 Dec 8. doi: 10.1038/sj.embor.7400856
PMCID:
PMC1796750
AbstractArticlePDF–363K
3.
Mutations of EXOSC3/Rrp40p associated with neurological diseases impact ribosomal RNA processing functions of the exosome in S. cerevisiae
Abby Gillespie, Jason Gabunilas, Joanna C. Jen, Guillaume F. Chanfreau
RNA. 2017 Apr; 23(4): 466–472. doi: 10.1261/rna.060004.116
PMCID:
PMC5340910
AbstractArticlePDF–802K
4.
Nuclear RNA surveillance in Saccharomyces cerevisiae: Trf4p-dependent polyadenylation of nascent hypomethylated tRNA and an aberrant form of 5S rRNA
SUJATHA KADABA, XUYING WANG, JAMES T. ANDERSON
RNA. 2006 Mar; 12(3): 508–521. doi: 10.1261/rna.2305406
PMCID:
PMC1383588
AbstractArticlePDF–656K
5.
Subunit architecture of multimeric complexes isolated directly from cells
Helena Hernández, Andrzej Dziembowski, Thomas Taverner, Bertrand Séraphin, Carol V Robinson
EMBO Rep. 2006 Jun; 7(6): 605–610. Published online 2006 May 19. doi: 10.1038/sj.embor.7400702
PMCID:
PMC1479597
AbstractArticlePDF–657K
6.
Rrp6 Moonlights in an RNA Exosome-Independent Manner to Promote Cell Survival and Gene Expression during Stress
Charles Wang, Yanru Liu, Samuel M. DeMario, Igor Mandric, Carlos Gonzalez-Figueroa, Guillaume F. Chanfreau
Cell Rep. Author manuscript; available in PMC 2020 Oct 26.
Published in final edited form as: Cell Rep. 2020 Jun 9; 31(10): 107754. doi: 10.1016/j.celrep.2020.107754
PMCID:
PMC7587046
AbstractArticlePDF–1.7M
7.
Visualization of Distinct Substrate Recruitment Pathways in the Yeast Exosome by Electron Microscopy
Jun-Jie Liu, Matthew A. Bratkowski, Xueqi Liu, Chu-Ya Niu, Ailong Ke, Hong-Wei Wang
Nat Struct Mol Biol. Author manuscript; available in PMC 2014 Jul 1.
Published in final edited form as: Nat Struct Mol Biol. 2014 Jan; 21(1): 95–102. Published online 2013 Dec 15. doi: 10.1038/nsmb.2736
PMCID:
PMC3976988
AbstractArticlePDF–1.0M
8.
Architecture of the yeast Rrp44–exosome complex suggests routes of RNA recruitment for 3′ end processing
Hong-Wei Wang, Jianjun Wang, Fang Ding, Kevin Callahan, Matthew A. Bratkowski, J. Scott Butler, Eva Nogales, Ailong Ke
Proc Natl Acad Sci U S A. 2007 Oct 23; 104(43): 16844–16849. Published online 2007 Oct 17. doi: 10.1073/pnas.0705526104
PMCID:
PMC2040474
AbstractArticlePDF–1.0M
9.
Exo- and endoribonucleolytic activities of yeast cytoplasmic and nuclear RNA exosomes are dependent on the non-catalytic core and central channel
Elizabeth V. Wasmuth, Christopher D. Lima
Mol Cell. Author manuscript; available in PMC 2013 Oct 12.
Published in final edited form as: Mol Cell. 2012 Oct 12; 48(1): 133–144. Published online 2012 Aug 16. doi: 10.1016/j.molcel.2012.07.012
PMCID:
PMC3472098
AbstractArticlePDF–2.4M
10.
Reconstitution of RNA exosomes from human and Saccharomyces cerevisiae: Cloning, expression, purification, and activity assays
Jaclyn C. Greimann, Christopher D. Lima
Methods Enzymol. Author manuscript; available in PMC 2009 Nov 5.
Published in final edited form as: Methods Enzymol. 2008; 448: 185–210. doi: 10.1016/S0076-6879(08)02610-4
PMCID:
PMC2773543
AbstractArticlePDF–1.0M
11.
A complex prediction: three-dimensional model of the yeast exosome
Patrick Aloy, Francesca D. Ciccarelli, Christina Leutwein, Anne-Claude Gavin, Giulio Superti-Furga, Peer Bork, Bettina Böttcher, Robert B. Russell
EMBO Rep. 2002 Jul 15; 3(7): 628–635. doi: 10.1093/embo-reports/kvf135
PMCID:
PMC1084189
AbstractArticlePDF–934K
12.
Structure determination of an 11-subunit exosome in complex with RNA by molecular replacement
Debora Lika Makino, Elena Conti
Acta Crystallogr D Biol Crystallogr. 2013 Nov 1; 69(Pt 11): 2226–2235. Published online 2013 Oct 12. doi: 10.1107/S0907444913011438
PMCID:
PMC3817696
AbstractArticlePDF–2.3M
13.
Degradation of ribosomal RNA precursors by the exosome
Christine Allmang, Philip Mitchell, Elisabeth Petfalski, David Tollervey
Nucleic Acids Res. 2000 Apr 15; 28(8): 1684–1691. doi: 10.1093/nar/28.8.1684
PMCID:
PMC102825
AbstractArticlePDF–508K
14.
CryoEM structure of yeast cytoplasmic exosome complex
Jun-Jie Liu, Chu-Ya Niu, Yao Wu, Dan Tan, Yang Wang, Ming-Da Ye, Yang Liu, Wenwei Zhao, Ke Zhou, Quan-Sheng Liu, Junbiao Dai, Xuerui Yang, Meng-Qiu Dong, Niu Huang, Hong-Wei Wang
Cell Res. 2016 Jul; 26(7): 822–837. Published online 2016 May 13. doi: 10.1038/cr.2016.56
PMCID:
PMC5129878
AbstractArticlePDF–12M
15.
Functions of the exosome in rRNA, snoRNA and snRNA synthesis.
C Allmang, J Kufel, G Chanfreau, P Mitchell, E Petfalski, D Tollervey
EMBO J. 1999 Oct 1; 18(19): 5399–5410. doi: 10.1093/emboj/18.19.5399
PMCID:
PMC1171609
SummaryPDF–465K
16.
Rrp47p Is an Exosome-Associated Protein Required for the 3′ Processing of Stable RNAs
Philip Mitchell, Elisabeth Petfalski, Rym Houalla, Alexandre Podtelejnikov, Matthias Mann, David Tollervey
Mol Cell Biol. 2003 Oct; 23(19): 6982–6992. doi: 10.1128/MCB.23.19.6982-6992.2003
PMCID:
PMC193929
AbstractArticlePDF–527K
17.
The Exosome Subunit Rrp44 Plays a Direct Role in RNA Substrate Recognition
Claudia Schneider, James T. Anderson, David Tollervey
Mol Cell. Author manuscript; available in PMC 2021 Jun 11.
Published in final edited form as: Mol Cell. 2007 Jul 20; 27(2): 324–31. doi: 10.1016/j.molcel.2007.06.006
PMCID:
PMC7610968
AbstractArticlePDF–1.4M
18.
A strategy for dissecting the architectures of native macromolecular assemblies
Yi Shi, Riccardo Pellarin, Peter C. Fridy, Javier Fernandez-Martinez, Mary K. Thompson, Yinyin Li, Qing Jun Wang, Andrej Sali, Michael P. Rout, Brian T. Chait
Nat Methods. Author manuscript; available in PMC 2016 Mar 22.
Published in final edited form as: Nat Methods. 2015 Dec; 12(12): 1135–1138. Published online 2015 Oct 5. doi: 10.1038/nmeth.3617
PMCID:
PMC4803312
AbstractArticlePDF–873K
19.
The yeast exosome and human PM–Scl are related complexes of 3′ → 5′ exonucleases
Christine Allmang, Elisabeth Petfalski, Alexandre Podtelejnikov, Matthias Mann, David Tollervey, Philip Mitchell
Genes Dev. 1999 Aug 15; 13(16): 2148–2158. doi: 10.1101/gad.13.16.2148
PMCID:
PMC316947
AbstractArticlePDF–1.1M
20.
Structure of an Rrp6-RNA exosome complex bound to polyA RNA
Elizabeth V. Wasmuth, Kurt Januszyk, Christopher D. Lima
Nature. Author manuscript; available in PMC 2015 Jan 29.
Published in final edited form as: Nature. 2014 Jul 24; 511(7510): 435–439. Published online 2014 Jul 6. doi: 10.1038/nature13406
PMCID:
PMC4310248
AbstractArticlePDF–5.2M

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