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Items: 1 to 20 of 108

1.
Epigenetic Mechanisms Contribute to Evolutionary Adaptation of Gene Network Activity under Environmental Selection
Xinyue Luo, Ruijie Song, David F. Moreno, Hong-Yeoul Ryu, Mark Hochstrasser, Murat Acar
Cell Rep. Author manuscript; available in PMC 2020 Nov 11.
Published in final edited form as: Cell Rep. 2020 Oct 27; 33(4): 108306. doi: 10.1016/j.celrep.2020.108306
PMCID:
PMC7656290
AbstractArticlePDF–2.0M
2.
Ongoing resolution of duplicate gene functions shapes the diversification of a metabolic network
Meihua Christina Kuang, Paul D Hutchins, Jason D Russell, Joshua J Coon, Chris Todd Hittinger
eLife. 2016; 5: e19027. Published online 2016 Sep 30. doi: 10.7554/eLife.19027
PMCID:
PMC5089864
AbstractArticlePDF–4.6M
3.
Induced Mutations in Yeast Cell Populations Adapting to an Unforeseen Challenge
Lindsay S. Moore, Wu Wei, Elad Stolovicki, Tamar Benbenishty, Stefan Wilkening, Lars M. Steinmetz, Erez Braun, Lior David
PLoS One. 2014; 9(10): e111133. Published online 2014 Oct 23. doi: 10.1371/journal.pone.0111133
PMCID:
PMC4207790
AbstractArticlePDF–1.4M
4.
Disruption of regulatory gene GAL80 in Saccharomyces cerevisiae: effects on carbon-controlled regulation of the galactose/melibiose pathway genes.
T E Torchia, R W Hamilton, C L Cano, J E Hopper
Mol Cell Biol. 1984 Aug; 4(8): 1521–1527. doi: 10.1128/mcb.4.8.1521
PMCID:
PMC368943
SummaryPage BrowsePDF–1.5M
5.
Gal80 proteins of Kluyveromyces lactis and Saccharomyces cerevisiae are highly conserved but contribute differently to glucose repression of the galactose regulon.
F T Zenke, W Zachariae, A Lunkes, K D Breunig
Mol Cell Biol. 1993 Dec; 13(12): 7566–7576. doi: 10.1128/mcb.13.12.7566
PMCID:
PMC364828
SummaryPage BrowsePDF–2.5M
6.
Functional domains of a negative regulatory protein, GAL80, of Saccharomyces cerevisiae.
Y Nogi, T Fukasawa
Mol Cell Biol. 1989 Jul; 9(7): 3009–3017. doi: 10.1128/mcb.9.7.3009
PMCID:
PMC362769
SummaryPage BrowsePDF–1.9M
7.
Two alternative pathways of transcription initiation in the yeast negative regulatory gene GAL80.
H Sakurai, T Ohishi, T Fukasawa
Mol Cell Biol. 1994 Oct; 14(10): 6819–6828. doi: 10.1128/mcb.14.10.6819
PMCID:
PMC359212
SummaryPage BrowsePDF–2.4M
8.
The relationship of regulatory proteins and DNase I hypersensitive sites in the yeast GAL1-10 genes.
D Lohr, J E Hopper
Nucleic Acids Res. 1985 Dec 9; 13(23): 8409–8423. doi: 10.1093/nar/13.23.8409
PMCID:
PMC322142
SummaryPage BrowsePDF–1.9M
9.
Nucleotide sequence of the yeast regulatory gene GAL80.
Y Nogi, T Fukasawa
Nucleic Acids Res. 1984 Dec 21; 12(24): 9287–9298. doi: 10.1093/nar/12.24.9287
PMCID:
PMC320461
SummaryPage BrowsePDF–996K
10.
Uninducible Mutants in the gal i Locus of Saccharomyces cerevisiae
H. C. Douglas, D. C. Hawthorne
J Bacteriol. 1972 Mar; 109(3): 1139–1143. doi: 10.1128/jb.109.3.1139-1143.1972
PMCID:
PMC247335
SummaryPage BrowsePDF–780K
11.
Computational analysis of GAL pathway pinpoints mechanisms underlying natural variation
Jiayin Hong, Julius Palme, Bo Hua, Michael Springer
PLoS Comput Biol. 2021 Sep; 17(9): e1008691. Published online 2021 Sep 27. doi: 10.1371/journal.pcbi.1008691
PMCID:
PMC8496860
AbstractArticlePDF–11M
12.
A double role of the Gal80 N terminus in activation of transcription by Gal4p
Annekathrin Reinhardt-Tews, Rościsław Krutyhołowa, Christian Günzel, Constance Roehl, Sebastian Glatt, Karin D Breunig
Life Sci Alliance. 2020 Dec; 3(12): e202000665. Published online 2020 Oct 9. doi: 10.26508/lsa.202000665
PMCID:
PMC7556753
AbstractArticlePDF–2.5M
13.
Direct Production of Difructose Anhydride IV from Sucrose by Co-fermentation of Recombinant Yeasts
Hyunjun Ko, Jung-Hoon Bae, Bong Hyun Sung, Mi-Jin Kim, Soon-Ho Park, Jung-Hoon Sohn
Sci Rep. 2019; 9: 15980. Published online 2019 Nov 4. doi: 10.1038/s41598-019-52373-5
PMCID:
PMC6828762
AbstractArticlePDF–1.3M
14.
Assigning function to natural allelic variation via dynamic modeling of gene network induction
Magali Richard, Florent Chuffart, Hélène Duplus‐Bottin, Fanny Pouyet, Martin Spichty, Etienne Fulcrand, Marianne Entrevan, Audrey Barthelaix, Michael Springer, Daniel Jost, Gaël Yvert
Mol Syst Biol. 2018 Jan; 14(1): e7803. Published online 2018 Jan 15. doi: 10.15252/msb.20177803
PMCID:
PMC5787706
AbstractArticlePDF–943K
15.
A precise genome editing method reveals insights into the activity of eukaryotic promoters
Gregory L. Elison, Ruijie Song, Murat Acar
Cell Rep. Author manuscript; available in PMC 2017 Jan 6.
Published in final edited form as: Cell Rep. 2017 Jan 3; 18(1): 275–286. doi: 10.1016/j.celrep.2016.12.014
PMCID:
PMC5216458
AbstractArticlePDF–1.2M
16.
Impact of Nonnatural Amino Acid Mutagenesis on the in Vivo Function and Binding Modes of a Transcriptional Activator
Chinmay Y. Majmudar, Lori W. Lee, Jody K. Lancia, Adaora Nwokoye, Qian Wang, Amberlyn M. Wands, Lei Wang, Anna K. Mapp
J Am Chem Soc. Author manuscript; available in PMC 2014 Oct 1.
Published in final edited form as: J Am Chem Soc. 2009 Oct 14; 131(40): 14240–14242. doi: 10.1021/ja904378z
PMCID:
PMC4182099
ArticlePDF–434K
17.
The Gal3p transducer of the GAL regulon interacts with the Gal80p repressor in its ligand-induced closed conformation
Tali Lavy, P. Rajesh Kumar, Hongzhen He, Leemor Joshua-Tor
Genes Dev. 2012 Feb 1; 26(3): 294–303. doi: 10.1101/gad.182691.111
PMCID:
PMC3278896
AbstractArticlePDF–1.1M
18.
Application of Structure Equation Modeling for Inferring a Serial Transcriptional Regulation in Yeast
Sachiyo Aburatani
Gene Regul Syst Bio. 2011; 5: 75–88. Published online 2011 Nov 10. doi: 10.4137/GRSB.S7569
PMCID:
PMC3236004
AbstractArticlePDF–656K
19.
Antisense expression increases gene expression variability and locus interdependency
Zhenyu Xu, Wu Wei, Julien Gagneur, Sandra Clauder-Münster, Miłosz Smolik, Wolfgang Huber, Lars M Steinmetz
Mol Syst Biol. 2011; 7: 468. Published online 2011 Feb 15. doi: 10.1038/msb.2011.1
PMCID:
PMC3063692
AbstractArticlePDF–1.1M
20.
Intragenic Suppression of Gal3C Interaction With Gal80 in the Saccharomyces cerevisiae GAL Gene Switch
Cuong Q. Diep, Gang Peng, Maria Bewley, Vepkhia Pilauri, Ira Ropson, James E. Hopper
Genetics. 2006 Jan; 172(1): 77–87. doi: 10.1534/genetics.105.050807
PMCID:
PMC1456197
AbstractArticlePDF–666K

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