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Select item 49859301.

Phosphatase Rtr1 Regulates Global Levels of Serine 5 RNA Polymerase II C-Terminal Domain Phosphorylation and Cotranscriptional Histone Methylation

Gerald O. Hunter, Melanie J. Fox, Whitney R. Smith-Kinnaman, Madelaine Gogol, Brian Fleharty, Amber L. Mosley

Mol Cell Biol. 2016 Sep 1; 36(17): 2236–2245. Prepublished online 2016 May 31. Published online 2016 Aug 12. doi: 10.1128/MCB.00870-15

PMCID:: PMC4985930

Abstract Article PDF–545K

Select item 48015112.

Structure of Saccharomyces cerevisiae Rtr1 reveals an active site for an atypical phosphatase

Seema Irani, S. D. Yogesha, Joshua Mayfield, Mengmeng Zhang, Yong Zhang, Wendy L. Matthews, Grace Nie, Nicholas A. Prescott, Yan Jessie Zhang

Sci Signal. Author manuscript; available in PMC 2017 Mar 1.

Published in final edited form as: Sci Signal. 2016; 9(417): ra24. Published online 2016 Mar 1. doi: 10.1126/scisignal.aad4805

PMCID:: PMC4801511

Abstract Article PDF–1.5M

Select item 41190233.

Rtr1 is a dual specificity phosphatase that dephosphorylates Tyr1 and Ser5 on the RNA Polymerase II CTD

Peter L. Hsu, Fan Yang, Whitney Smith-Kinnaman, Wen Yang, Jae-Eun Song, Amber L. Mosley, Gabriele Varani

J Mol Biol. Author manuscript; available in PMC 2015 Aug 12.

Published in final edited form as: J Mol Biol. 2014 Aug 12; 426(16): 2970–2981. Published online 2014 Jun 18. doi: 10.1016/j.jmb.2014.06.010

PMCID:: PMC4119023

Abstract Article PDF–1008K

Select item 47932114.

The Rtr1p CTD phosphatase autoregulates its mRNA through a degradation pathway involving the REX exonucleases

Domagoj Hodko, Taylor Ward, Guillaume Chanfreau

RNA. 2016 Apr; 22(4): 559–570. doi: 10.1261/rna.055723.115

PMCID:: PMC4793211

Abstract Article PDF–981K

Select item 88750305.

The Association of Rpb4 with RNA Polymerase II Depends on CTD Ser5P Phosphatase Rtr1 and Influences mRNA Decay in Saccharomyces cerevisiae

Ana I. Garrido-Godino, Abel Cuevas-Bermúdez, Francisco Gutiérrez-Santiago, Maria del Carmen Mota-Trujillo, Francisco Navarro

Int J Mol Sci. 2022 Feb; 23(4): 2002. Published online 2022 Feb 11. doi: 10.3390/ijms23042002

PMCID:: PMC8875030

Abstract Article PDF–3.3M

Select item 33461096.

Yeast Swd2 Is Essential Because of Antagonism between Set1 Histone Methyltransferase Complex and APT (Associated with Pta1) Termination Factor

Luis M. Soares, Stephen Buratowski

J Biol Chem. 2012 May 4; 287(19): 15219–15231. Published online 2012 Mar 19. doi: 10.1074/jbc.M112.341412

PMCID:: PMC3346109

Abstract Article PDF–2.6M

Select item 32414207.

The Conserved Foot Domain of RNA Pol II Associates with Proteins Involved in Transcriptional Initiation and/or Early Elongation

M. Carmen García-López, Vicent Pelechano, M. Carmen Mirón-García, Ana I. Garrido-Godino, Alicia García, Olga Calvo, Michel Werner, José E. Pérez-Ortín, Francisco Navarro

Genetics. 2011 Dec; 189(4): 1235–1248. doi: 10.1534/genetics.111.133215

PMCID:: PMC3241420

Abstract Article PDF–1.8M

Select item 27853308.

Phosphorylation of the Yeast Rpb1 C-terminal Domain at Serines 2, 5, and 7

Minkyu Kim, Hyunsuk Suh, Eun-Jung Cho, Stephen Buratowski

J Biol Chem. 2009 Sep 25; 284(39): 26421–26426. Published online 2009 Aug 13. doi: 10.1074/jbc.M109.028993

PMCID:: PMC2785330

Abstract Article PDF–2.0M

Select item 29960529.

Rtr1 is a CTD Phosphatase that Regulates the Transition from Serine 5 to Serine 2 Phosphorylation during the RNA Polymerase II Transcription Cycle

Amber L. Mosley, Samantha G. Pattenden, Michael Carey, Swaminathan Venkatesh, Joshua M. Gilmore, Laurence Florens, Jerry L. Workman, Michael P. Washburn

Mol Cell. Author manuscript; available in PMC 2010 Dec 2.

Published in final edited form as: Mol Cell. 2009 Apr 24; 34(2): 168–178. doi: 10.1016/j.molcel.2009.02.025

PMCID:: PMC2996052

Abstract Article PDF–2.1M

Select item 244665310.

Rtr1 Is the Saccharomyces cerevisiae Homolog of a Novel Family of RNA Polymerase II-Binding Proteins

Patrick A. Gibney, Thomas Fries, Susanne M. Bailer, Kevin A. Morano

Eukaryot Cell. 2008 Jun; 7(6): 938–948. Published online 2008 Apr 11. doi: 10.1128/EC.00042-08

PMCID:: PMC2446653

Abstract Article PDF–654K

Select item 358744711.

Eukaryotic GPN-loop GTPases paralogs use a dimeric assembly reminiscent of archeal GPN

Béatrice Alonso, Carole Beraud, Sarra Meguellati, Shu W. Chen, Jean Luc Pellequer, Jean Armengaud, Christian Godon

Cell Cycle. 2013 Feb 1; 12(3): 463–472. doi: 10.4161/cc.23367

PMCID:: PMC3587447

Abstract Article PDF–1.2M

Select item 367581112.

Quantitative Proteomics Demonstrates That the RNA Polymerase II Subunits Rpb4 and Rpb7 Dissociate during Transcriptional Elongation

Amber L. Mosley, Gerald O. Hunter, Mihaela E. Sardiu, Michaela Smolle, Jerry L. Workman, Laurence Florens, Michael P. Washburn

Mol Cell Proteomics. 2013 Jun; 12(6): 1530–1538. Published online 2013 Feb 15. doi: 10.1074/mcp.M112.024034

PMCID:: PMC3675811

Abstract Article PDF–569K

Select item 407417313.

The interactome of the atypical phosphatase Rtr1 in Saccharomyces cerevisiae

Whitney R. Smith-Kinnaman, Michael J. Berna, Gerald O. Hunter, Jason D. True, Peter Hsu, Gabriela I. Cabello, Melanie J. Fox, Gabriele Varani, Amber L. Mosley

Mol Biosyst. Author manuscript; available in PMC 2015 Jul 1.

Published in final edited form as: Mol Biosyst. 2014 Jul; 10(7): 1730–1741. doi: 10.1039/c4mb00109e

PMCID:: PMC4074173

Abstract Article PDF–782K

Select item 316779714.

Genome-wide survey of yeast mutations leading to activation of the yeast cell integrity MAPK pathway: Novel insights into diverse MAPK outcomes

Patricia Arias, Sonia Díez-Muñiz, Raúl García, César Nombela, José M Rodríguez-Peña, Javier Arroyo

BMC Genomics. 2011; 12: 390. Published online 2011 Aug 2. doi: 10.1186/1471-2164-12-390

PMCID:: PMC3167797

Abstract Article PDF–2.9M

Select item 338708215.

Cdc28 kinase activity regulates the basal transcription machinery at a subset of genes

Pierre Chymkowitch, Vegard Eldholm, Susanne Lorenz, Christine Zimmermann, Jessica M. Lindvall, Magnar Bjørås, Leonardo A. Meza-Zepeda, Jorrit M. Enserink

Proc Natl Acad Sci U S A. 2012 Jun 26; 109(26): 10450–10455. Published online 2012 Jun 11. doi: 10.1073/pnas.1200067109

PMCID:: PMC3387082

Abstract Article PDF–969K

Select item 849296116.

Spt4 facilitates the movement of RNA polymerase II through the +2 nucleosomal barrier

Ülkü Uzun, Thomas Brown, Harry Fischl, Andrew Angel, Jane Mellor

Cell Rep. 2021 Sep 28; 36(13): 109755. Published online 2021 Sep 29. doi: 10.1016/j.celrep.2021.109755

PMCID:: PMC8492961

Abstract Article

Select item 809198117.

Essential histone chaperones collaborate to regulate transcription and chromatin integrity

Olga Viktorovskaya, James Chuang, Dhawal Jain, Natalia I. Reim, Francheska López-Rivera, Magdalena Murawska, Dan Spatt, L. Stirling Churchman, Peter J. Park, Fred Winston

Genes Dev. 2021 May 1; 35(9-10): 698–712. doi: 10.1101/gad.348431.121

PMCID:: PMC8091981

Abstract Article PDF–6.4M

Select item 568948018.

Exploring Quantitative Yeast Phenomics with Single Cell Analysis of DNA Damage Foci

Erin B. Styles, Karen J. Founk, Lee A. Zamparo, Tina L. Sing, Dogus Altintas, Cyril Ribeyre, Virginie Ribaud, Jacques Rougemont, David Mayhew, Michael Costanzo, Matej Usaj, Adrian J. Verster, Elizabeth N. Koch, Daniele Novarina, Marco Graf, Brian Luke, Marco Muzi-Falconi, Chad L. Myers, Robi David Mitra, David Shore, Grant W. Brown, Zhaolei Zhang, Charles Boone, Brenda J. Andrews

Cell Syst. Author manuscript; available in PMC 2017 Nov 16.

Published in final edited form as: Cell Syst. 2016 Sep 28; 3(3): 264–277.e10. Published online 2016 Sep 8. doi: 10.1016/j.cels.2016.08.008

PMCID:: PMC5689480

Abstract Article PDF–2.9M

Select item 819177519.

FACT interacts with Set3 HDAC and fine-tunes GAL1 transcription in response to environmental stimulation

He Leng, Shaofeng Liu, Yang Lei, Yuantao Tang, Shijia Gu, Jiazhi Hu, She Chen, Jianxun Feng, Qing Li

Nucleic Acids Res. 2021 Jun 4; 49(10): 5502–5519. Published online 2021 May 8. doi: 10.1093/nar/gkab312

PMCID:: PMC8191775

Abstract Article PDF–3.0M

Select item 529315420.

Subgenic Pol II interactomes identify region‐specific transcription elongation regulators

Kevin M Harlen, L Stirling Churchman

Mol Syst Biol. 2017 Jan; 13(1): 900. Published online 2017 Jan 2. doi: 10.15252/msb.20167279

PMCID:: PMC5293154

Abstract Article PDF–2.3M

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