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Select item 69816171.

Metabolic Adaptation to Sulfur of Hyperthermophilic Palaeococcus pacificus DY20341^T from Deep-Sea Hydrothermal Sediments

Xiang Zeng, Xiaobo Zhang, Zongze Shao

Int J Mol Sci. 2020 Jan; 21(1): 368. Published online 2020 Jan 6. doi: 10.3390/ijms21010368

PMCID:: PMC6981617

Abstract Article PDF–1.4M

Select item 68073812.

An analysis of the IS6/IS26 family of insertion sequences: is it a single family?

Christopher J. Harmer, Ruth M. Hall

Microb Genom. 2019 Sep; 5(9): e000291. Published online 2019 Sep 5. doi: 10.1099/mgen.0.000291

PMCID:: PMC6807381

Abstract Article PDF–14M

Select item 66401643.

Next Generation DNA-Seq and Differential RNA-Seq Allow Re-annotation of the Pyrococcus furiosus DSM 3638 Genome and Provide Insights Into Archaeal Antisense Transcription

Felix Grünberger, Robert Reichelt, Boyke Bunk, Cathrin Spröer, Jörg Overmann, Reinhard Rachel, Dina Grohmann, Winfried Hausner

Front Microbiol. 2019; 10: 1603. Published online 2019 Jul 12. doi: 10.3389/fmicb.2019.01603

PMCID:: PMC6640164

Abstract Article PDF–2.8M

Select item 57924364.

TT(N)mGCCTC inhibits archaeal family B DNA polymerases

Shuhui Sun, Wei Guo, Jin-Shu Yang, Mengsheng Qiu, Xiao-Jing Zhu, Zhong-Min Dai

Sci Rep. 2018; 8: 1990. Published online 2018 Jan 31. doi: 10.1038/s41598-018-20127-4

PMCID:: PMC5792436

Abstract Article PDF–1.6M

Select item 57565665.

Fusion of DNA-binding domain of Pyrococcus furiosus ligase with TaqStoffel DNA polymerase as a useful tool in PCR with difficult targets

Marta Śpibida, Beata Krawczyk, Beata Zalewska-Piątek, Rafał Piątek, Magdalena Wysocka, Marcin Olszewski

Appl Microbiol Biotechnol. 2018; 102(2): 713–721. Published online 2017 Nov 4. doi: 10.1007/s00253-017-8560-6

PMCID:: PMC5756566

Abstract Article PDF–1.1M

Select item 56585786.

Ethanol production by the hyperthermophilic archaeon Pyrococcus furiosus by expression of bacterial bifunctional alcohol dehydrogenases

Matthew W. Keller, Gina L. Lipscomb, Diep M. Nguyen, Alexander T. Crowley, Gerrit J. Schut, Israel Scott, Robert M. Kelly, Michael W. W. Adams

Microb Biotechnol. 2017 Nov; 10(6): 1535–1545. Published online 2017 Feb 14. doi: 10.1111/1751-7915.12486

PMCID:: PMC5658578

Abstract Article PDF–328K

Select item 51725477.

A Comprehensive Software Suite for the Analysis of cDNAs

Kazuharu Arakawa, Haruo Suzuki, Kosuke Fujishima, Kenji Fujimoto, Sho Ueda, Motomu Matsui, Masaru Tomita

Genomics Proteomics Bioinformatics. 2005; 3(3): 179–188. Published online 2016 Nov 28. doi: 10.1016/S1672-0229(05)03023-8

PMCID:: PMC5172547

Abstract Article PDF–541K

Select item 50542228.

A Method for Identification of Selenoprotein Genes in Archaeal Genomes

Mingfeng Li, Yanzhao Huang, Yi Xiao

Genomics Proteomics Bioinformatics. 2009 Jun; 7(1-2): 62–70. Published online 2009 Jul 8. doi: 10.1016/S1672-0229(08)60034-0

PMCID:: PMC5054222

Abstract Article PDF–759K

Select item 50540919.

Restauro-G: A Rapid Genome Re-Annotation System for Comparative Genomics

Satoshi Tamaki, Kazuharu Arakawa, Nobuaki Kono, Masaru Tomita

Genomics Proteomics Bioinformatics. 2007; 5(1): 53–58. Published online 2007 Jun 15. doi: 10.1016/S1672-0229(07)60014-X

PMCID:: PMC5054091

Abstract Article PDF–141K

Select item 500627310.

Inversion symmetry of DNA k-mer counts: validity and deviations

Sagi Shporer, Benny Chor, Saharon Rosset, David Horn

BMC Genomics. 2016; 17(1): 696. Published online 2016 Aug 31. doi: 10.1186/s12864-016-3012-8

PMCID:: PMC5006273

Abstract Article PDF–1.2M

Select item 492636511.

Expression and Characterization of a Novel Glycerophosphodiester Phosphodiesterase from Pyrococcus furiosus DSM 3638 That Possesses Lysophospholipase D Activity

Fanghua Wang, Linhui Lai, Yanhua Liu, Bo Yang, Yonghua Wang

Int J Mol Sci. 2016 Jun; 17(6): 831. Published online 2016 May 30. doi: 10.3390/ijms17060831

PMCID:: PMC4926365

Abstract Article PDF–4.8M

Select item 473154312.

Enhancing Heat Tolerance of the Little Dogwood Cornus canadensis L. f. with Introduction of a Superoxide Reductase Gene from the Hyperthermophilic Archaeon Pyrococcus furiosus

Xing-Min Geng, Xiang Liu, Mikyoung Ji, William A. Hoffmann, Amy Grunden, Qiu-Yun J. Xiang

Front Plant Sci. 2016; 7: 26. Published online 2016 Jan 29. doi: 10.3389/fpls.2016.00026

Correction in:: Front Plant Sci. 2016; 7: 226.

PMCID:: PMC4731543

Abstract Article PDF–1.3M

Select item 473154013.

Heterologous Production of an Energy-Conserving Carbon Monoxide Dehydrogenase Complex in the Hyperthermophile Pyrococcus furiosus

Gerrit J. Schut, Gina L. Lipscomb, Diep M. N. Nguyen, Robert M. Kelly, Michael W. W. Adams

Front Microbiol. 2016; 7: 29. Published online 2016 Jan 29. doi: 10.3389/fmicb.2016.00029

PMCID:: PMC4731540

Abstract Article PDF–1.4M

Select item 445505714.

Horizontal gene transfer and genome evolution in Methanosarcina

Sofya K. Garushyants, Marat D. Kazanov, Mikhail S. Gelfand

BMC Evol Biol. 2015; 15: 102. Published online 2015 Jun 5. doi: 10.1186/s12862-015-0393-2

PMCID:: PMC4455057

Abstract Article PDF–1023K

Select item 439088715.

Phylogeny and Taxonomy of Archaea: A Comparison of the Whole-Genome-Based CVTree Approach with 16S rRNA Sequence Analysis

Guanghong Zuo, Zhao Xu, Bailin Hao

Life (Basel) 2015 Mar; 5(1): 949–968. Published online 2015 Mar 17. doi: 10.3390/life5010949

PMCID:: PMC4390887

Abstract Article PDF–1019K

Select item 434226816.

A mutant (‘lab strain’) of the hyperthermophilicarchaeonPyrococcusfuriosus, lacking flagella, has unusual growthphysiology

Derrick L. Lewis, Jaspreet S. Notey, SanjeevK. Chandrayan, Andrew J. Loder, Gina L. Lipscomb, Michael W.W. Adams, Robert M. Kelly

Extremophiles. Author manuscript; available in PMC 2016 Mar 1.

Published in final edited form as: Extremophiles. 2015 Mar; 19(2): 269–281. Published online 2014 Dec 4. doi: 10.1007/s00792-014-0712-3

PMCID:: PMC4342268

Abstract Article PDF–1.0M

Select item 416401017.

Ori-Finder 2, an integrated tool to predict replication origins in the archaeal genomes

Hao Luo, Chun-Ting Zhang, Feng Gao

Front Microbiol. 2014; 5: 482. Published online 2014 Sep 15. doi: 10.3389/fmicb.2014.00482

PMCID:: PMC4164010

Abstract Article PDF–1.9M

Select item 390631318.

Expression of antibodies using single open reading frame (sORF) vector design: Demonstration of manufacturing feasibility

Wendy R. Gion, Rachel A. Davis-Taber, Dean A. Regier, Emma Fung, Limary Medina, Ling C. Santora, Sahana Bose, Alexander V. Ivanov, Barbara A. Perilli-Palmer, Chris M. Chumsae, Joseph G. Matuck, Yune Z. Kunes, Gerald R. Carson

MAbs. 2013 Jul 1; 5(4): 595–607. Published online 2013 May 31. doi: 10.4161/mabs.25161

PMCID:: PMC3906313

Abstract Article PDF–3.6M

Select item 375158519.

Proteomics of Pyrococcus Furiosus(Pfu): Identification of Extracted Proteins by Three Independent Methods

Catherine C.L. Wong, Daniel Cociorva, Christine A. Miller, Alexander Schmidt, Craig Monell, Ruedi Aebersold, John R. Yates, III

J Proteome Res. Author manuscript; available in PMC 2014 Feb 1.

Published in final edited form as: J Proteome Res. 2013 Feb 1; 12(2): 763–770. Published online 2013 Jan 18. doi: 10.1021/pr300840j

PMCID:: PMC3751585

Abstract Article PDF–995K

Select item 365054820.

Regulation of Iron Metabolism by Pyrococcus furiosus

Yixuan Zhu, Sunil Kumar, Angeli L. Menon, Robert A. Scott, Michael W. W. Adams

J Bacteriol. 2013 May; 195(10): 2400–2407. doi: 10.1128/JB.02280-12

PMCID:: PMC3650548

Abstract Article PDF–395K

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