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Items: 15

1.
A Universal, Genomewide GuideFinder for CRISPR/Cas9 Targeting in Microbial Genomes
Michelle Spoto, Changhui Guan, Elizabeth Fleming, Julia Oh
mSphere. 2020 Jan-Feb; 5(1): e00086-20. Published online 2020 Feb 12. doi: 10.1128/mSphere.00086-20
PMCID:
PMC7021469
AbstractArticlePDF–2.1M
2.
The genome sequence of Streptomyces rochei 7434AN4, which carries a linear chromosome and three characteristic linear plasmids
Yosi Nindita, Zhisheng Cao, Amirudin Akhmad Fauzi, Aiko Teshima, Yuya Misaki, Rukman Muslimin, Yingjie Yang, Yuh Shiwa, Hirofumi Yoshikawa, Michihira Tagami, Alexander Lezhava, Jun Ishikawa, Makoto Kuroda, Tsuyoshi Sekizuka, Kuninobu Inada, Haruyasu Kinashi, Kenji Arakawa
Sci Rep. 2019; 9: 10973. Published online 2019 Jul 29. doi: 10.1038/s41598-019-47406-y
PMCID:
PMC6662830
AbstractArticlePDF–1.7M
3.
Microarray‐based comparison of genetic differences between strains of Streptomyces turgidiscabies with focus on the pathogenicity island
MARJA AITTAMAA, PANU SOMERVUO, INTO LAAKSO, PETRI AUVINEN, JARI P. T. VALKONEN
Mol Plant Pathol. 2010 Nov; 11(6): 733–746. Published online 2010 Jun 30. doi: 10.1111/j.1364-3703.2010.00641.x
PMCID:
PMC6640499
AbstractArticlePDF–662K
4.
Species' identification and microarray‐based comparative genome analysis of Streptomyces species isolated from potato scab lesions in Norway
MERETE W. DEES, PANU SOMERVUO, ERIK LYSØE, MARJA AITTAMAA, JARI P. T. VALKONEN
Mol Plant Pathol. 2012 Feb; 13(2): 174–186. Published online 2011 Sep 1. doi: 10.1111/j.1364-3703.2011.00741.x
PMCID:
PMC6638902
AbstractArticlePDF–1.7M
5.
The ESX/type VII secretion system modulates development, but not virulence, of the plant pathogen Streptomyces scabies
Joanna K. Fyans, Dawn Bignell, Rosemary Loria, Ian Toth, Tracy Palmer
Mol Plant Pathol. 2013 Feb; 14(2): 119–130. Published online 2012 Sep 26. doi: 10.1111/j.1364-3703.2012.00835.x
PMCID:
PMC6638804
AbstractArticlePDF–1.6M
6.
Genomic data mining reveals a rich repertoire of transport proteins in Streptomyces
Zhan Zhou, Ning Sun, Shanshan Wu, Yong-Quan Li, Yufeng Wang
BMC Genomics. 2016; 17(Suppl 7): 510. Published online 2016 Aug 22. doi: 10.1186/s12864-016-2899-4
PMCID:
PMC5001237
AbstractArticlePDF–517K
7.
Genome Content and Phylogenomics Reveal both Ancestral and Lateral Evolutionary Pathways in Plant-Pathogenic Streptomyces Species
Jose C. Huguet-Tapia, Tristan Lefebure, Jonathan H. Badger, Dongli Guan, Gregg S. Pettis, Michael J. Stanhope, Rosemary Loria
Appl Environ Microbiol. 2016 Apr 1; 82(7): 2146–2155. Prepublished online 2016 Jan 29. Published online 2016 Mar 21. doi: 10.1128/AEM.03504-15
PMCID:
PMC4807529
AbstractArticlePDF–1.6M
8.
Recently published Streptomyces genome sequences
James Harrison, David J Studholme
Microb Biotechnol. 2014 Sep; 7(5): 373–380. Published online 2014 Aug 7. doi: 10.1111/1751-7915.12143
PMCID:
PMC4229319
ArticlePDF–502K
9.
Characterization of the Integration and Modular Excision of the Integrative Conjugative Element PAISt in Streptomyces turgidiscabies Car8
Jose C. Huguet-Tapia, Dawn R. D. Bignell, Rosemary Loria
PLoS One. 2014; 9(6): e99345. Published online 2014 Jun 13. doi: 10.1371/journal.pone.0099345
Correction in:
PLoS One. 2015; 10(4): e0121152.
PMCID:
PMC4057263
AbstractArticlePDF–1.5M
10.
DNA-COMPACT: DNA COMpression Based on a Pattern-Aware Contextual Modeling Technique
Pinghao Li, Shuang Wang, Jihoon Kim, Hongkai Xiong, Lucila Ohno-Machado, Xiaoqian Jiang
PLoS One. 2013; 8(11): e80377. Published online 2013 Nov 25. doi: 10.1371/journal.pone.0080377
PMCID:
PMC3840021
AbstractArticlePDF–2.1M
11.
Contrasted evolutionary constraints on secreted and non-secreted proteomes of selected Actinobacteria
Subarna Thakur, Philippe Normand, Vincent Daubin, Louis S Tisa, Arnab Sen
BMC Genomics. 2013; 14: 474. Published online 2013 Jul 13. doi: 10.1186/1471-2164-14-474
PMCID:
PMC3729583
AbstractArticlePDF–671K
12.
Genomic and transcriptomic insights into the thermo-regulated biosynthesis of validamycin in Streptomyces hygroscopicus 5008
Hang Wu, Shuang Qu, Chenyang Lu, Huajun Zheng, Xiufen Zhou, Linquan Bai, Zixin Deng
BMC Genomics. 2012; 13: 337. Published online 2012 Jul 24. doi: 10.1186/1471-2164-13-337
PMCID:
PMC3424136
AbstractArticlePDF–1.8M
13.
Genome plasticity and systems evolution in Streptomyces
Zhan Zhou, Jianying Gu, Yong-Quan Li, Yufeng Wang
BMC Bioinformatics. 2012; 13(Suppl 10): S8. Published online 2012 Jun 25. doi: 10.1186/1471-2105-13-S10-S8
PMCID:
PMC3388780
AbstractArticlePDF–871K
14.
The -omics Era- Toward a Systems-Level Understanding of Streptomyces
Zhan Zhou, Jianying Gu, Yi-Ling Du, Yong-Quan Li, Yufeng Wang
Curr Genomics. 2011 Sep; 12(6): 404–416. doi: 10.2174/138920211797248556
PMCID:
PMC3178909
AbstractArticlePDF–251K
15.
Genes Associated with 2-Methylisoborneol Biosynthesis in Cyanobacteria: Isolation, Characterization, and Expression in Response to Light
Zhongjie Wang, Yao Xu, Jihai Shao, Jie Wang, Renhui Li
PLoS One. 2011; 6(4): e18665. Published online 2011 Apr 7. doi: 10.1371/journal.pone.0018665
PMCID:
PMC3072421
AbstractArticlePDF–801K

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