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Items: 12

Select item 64201291.

A programmed wave of uridylation-primed mRNA degradation is essential for meiotic progression and mammalian spermatogenesis

Marcos Morgan, Yuka Kabayama, Christian Much, Ivayla Ivanova, Monica Di Giacomo, Tatsiana Auchynnikava, Jack Michael Monahan, Dimitrios Michael Vitsios, Lina Vasiliauskaitė, Stefano Comazzetto, Juri Rappsilber, Robin Campbell Allshire, Bo Torben Porse, Anton James Enright, Dónal O’Carroll

Cell Res. 2019 Mar; 29(3): 221–232. Published online 2019 Jan 7. doi: 10.1038/s41422-018-0128-1

PMCID:: PMC6420129

Abstract Article PDF–2.9M

Select item 58037792.

Nonsense in the testis: multiple roles for nonsense-mediated decay revealed in male reproduction

Clinton C. MacDonald, Petar N. Grozdanov

Biol Reprod. 2017 May; 96(5): 939–947. Published online 2017 Apr 22. doi: 10.1093/biolre/iox033

PMCID:: PMC5803779

Abstract Article PDF–1.3M

Select item 48582253.

UPF2-Dependent Nonsense-Mediated mRNA Decay Pathway Is Essential for Spermatogenesis by Selectively Eliminating Longer 3'UTR Transcripts

Jianqiang Bao, Kristoffer Vitting-Seerup, Johannes Waage, Chong Tang, Ying Ge, Bo T. Porse, Wei Yan

PLoS Genet. 2016 May; 12(5): e1005863. Published online 2016 May 5. doi: 10.1371/journal.pgen.1005863

PMCID:: PMC4858225

Abstract Article PDF–20M

Select item 48581584.

Chromatoid Body Protein TDRD6 Supports Long 3’ UTR Triggered Nonsense Mediated mRNA Decay

Grigorios Fanourgakis, Mathias Lesche, Müge Akpinar, Andreas Dahl, Rolf Jessberger

PLoS Genet. 2016 May; 12(5): e1005857. Published online 2016 May 5. doi: 10.1371/journal.pgen.1005857

PMCID:: PMC4858158

Abstract Article PDF–8.8M

Select item 31655465.

Inhibition of Nonsense-Mediated RNA Decay by the Tumor Microenvironment Promotes Tumorigenesis

Ding Wang, Jiri Zavadil, Leenus Martin, Fabio Parisi, Eugene Friedman, David Levy, Heather Harding, David Ron, Lawrence B. Gardner

Mol Cell Biol. 2011 Sep; 31(17): 3670–3680. doi: 10.1128/MCB.05704-11

PMCID:: PMC3165546

Abstract Article PDF–2.5M

Select item 29065126.

UPF2 Is a Critical Regulator of Liver Development, Function and Regeneration

Lina A. Thoren, Gitte A. Nørgaard, Joachim Weischenfeldt, Johannes Waage, Janus S. Jakobsen, Inge Damgaard, Frida C. Bergström, Anna M. Blom, Rehannah Borup, Hanne Cathrine Bisgaard, Bo T. Porse

PLoS One. 2010; 5(7): e11650. Published online 2010 Jul 19. doi: 10.1371/journal.pone.0011650

PMCID:: PMC2906512

Abstract Article PDF–10M

Select item 23771927.

NMD is essential for hematopoietic stem and progenitor cells and for eliminating by-products of programmed DNA rearrangements

Joachim Weischenfeldt, Inge Damgaard, David Bryder, Kim Theilgaard-Mönch, Lina A. Thoren, Finn Cilius Nielsen, Sten Eirik W. Jacobsen, Claus Nerlov, Bo Torben Porse

Genes Dev. 2008 May 15; 22(10): 1381–1396. doi: 10.1101/gad.468808

PMCID:: PMC2377192

Abstract Article PDF–1.7M

Select item 16368038.

Upf1/Upf2 Regulation of 3′ Untranslated Region Splice Variants of AUF1 Links Nonsense-Mediated and A+U-Rich Element-Mediated mRNA Decay

Lili Banihashemi, Gerald M. Wilson, Neha Das, Gary Brewer

Mol Cell Biol. 2006 Dec; 26(23): 8743–8754. Published online 2006 Sep 25. doi: 10.1128/MCB.02251-05

PMCID:: PMC1636803

Abstract Article PDF–545K

Select item 3109929.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098010.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 16551111.

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells

Doug Stryke, Michiko Kawamoto, Conrad C. Huang, Susan J. Johns, Leslie A. King, Courtney A. Harper, Elaine C. Meng, Roy E. Lee, Alice Yee, Larry L'Italien, Pao-Tien Chuang, Stephen G. Young, William C. Skarnes, Patricia C. Babbitt, Thomas E. Ferrin

Nucleic Acids Res. 2003 Jan 1; 31(1): 278–281. doi: 10.1093/nar/gkg064