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Items: 17

1.
The CDK Pef1 and protein phosphatase 4 oppose each other for regulating cohesin binding to fission yeast chromosomes
Adrien Birot, Marta Tormos-Pérez, Sabine Vaur, Amélie Feytout, Julien Jaegy, Dácil Alonso Gil, Stéphanie Vazquez, Karl Ekwall, Jean-Paul Javerzat
eLife. 2020; 9: e50556. Published online 2020 Jan 2. doi: 10.7554/eLife.50556
PMCID:
PMC6954021
AbstractArticlePDF–1.5M
2.
Pericentromere-specific cohesin complex prevents meiotic pericentric DNA double-strand breaks and lethal crossovers
Mridula Nambiar, Gerald R. Smith
Mol Cell. Author manuscript; available in PMC 2019 Aug 16.
Published in final edited form as: Mol Cell. 2018 Aug 16; 71(4): 540–553.e4. Published online 2018 Aug 2. doi: 10.1016/j.molcel.2018.06.035
PMCID:
PMC6097939
AbstractArticlePDF–981K
3.
Evaluating the control of mRNA decay in fission yeast
Brandon J. Cuthbertson, Perry J. Blackshear
Methods Enzymol. Author manuscript; available in PMC 2016 Feb 26.
Published in final edited form as: Methods Enzymol. 2008; 449: 73–95. doi: 10.1016/S0076-6879(08)02404-X
PMCID:
PMC4768794
AbstractArticlePDF–2.2M
4.
misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads
Xiao Zhu, Henry C. M. Leung, Rongjie Wang, Francis Y. L. Chin, Siu Ming Yiu, Guangri Quan, Yajie Li, Rui Zhang, Qinghua Jiang, Bo Liu, Yucui Dong, Guohui Zhou, Yadong Wang
BMC Bioinformatics. 2015; 16: 386. Published online 2015 Nov 16. doi: 10.1186/s12859-015-0818-3
PMCID:
PMC4647709
AbstractArticlePDF–1.6M
5.
Engineering an efficient and tight d-amino acid-inducible gene expression system in Rhodosporidium/Rhodotorula species
Yanbin Liu, Chong Mei John Koh, Si Te Ngoh, Lianghui Ji
Microb Cell Fact. 2015; 14: 170. Published online 2015 Oct 26. doi: 10.1186/s12934-015-0357-7
Correction in:
Microb Cell Fact. 2017; 16: 107.
PMCID:
PMC4624585
AbstractArticlePDF–4.8M
6.
Moniliellomycetes and Malasseziomycetes, two new classes in Ustilaginomycotina
Q.-M. Wang, B. Theelen, M. Groenewald, F.-Y. Bai, T. Boekhout
Persoonia. 2014 Dec; 33: 41–47. Published online 2014 May 23. doi: 10.3767/003158514X682313
PMCID:
PMC4312936
AbstractArticlePDF–309K
7.
PERGA: A Paired-End Read Guided De Novo Assembler for Extending Contigs Using SVM and Look Ahead Approach
Xiao Zhu, Henry C. M. Leung, Francis Y. L. Chin, Siu Ming Yiu, Guangri Quan, Bo Liu, Yadong Wang
PLoS One. 2014; 9(12): e114253. Published online 2014 Dec 2. doi: 10.1371/journal.pone.0114253
PMCID:
PMC4252104
AbstractArticlePDF–584K
8.
Examining new phylogenetic markers to uncover the evolutionary history of early-diverging fungi: comparing MCM7, TSR1 and rRNA genes for single- and multi-gene analyses of the Kickxellomycotina
E.D. Tretter, E.M. Johnson, Y. Wang, P. Kandel, M.M. White
Persoonia. 2013 Jun; 30: 106–125. Published online 2013 Mar 20. doi: 10.3767/003158513X666394
PMCID:
PMC3734964
AbstractArticlePDF–786K
9.
A Convolutional Code-Based Sequence Analysis Model and Its Application
Xiao Liu, Xiaoli Geng
Int J Mol Sci. 2013 Apr; 14(4): 8393–8405. Published online 2013 Apr 16. doi: 10.3390/ijms14048393
PMCID:
PMC3645750
AbstractArticlePDF–517K
10.
Paired-end sequencing of Fosmid libraries by Illumina
Louise J.S. Williams, Diana G. Tabbaa, Na Li, Aaron M. Berlin, Terrance P. Shea, Iain MacCallum, Michael S. Lawrence, Yotam Drier, Gad Getz, Sarah K. Young, David B. Jaffe, Chad Nusbaum, Andreas Gnirke
Genome Res. 2012 Nov; 22(11): 2241–2249. doi: 10.1101/gr.138925.112
PMCID:
PMC3483553
AbstractArticlePDF–789K
11.
Parameters for accurate genome alignment
Martin C Frith, Michiaki Hamada, Paul Horton
BMC Bioinformatics. 2010; 11: 80. Published online 2010 Feb 9. doi: 10.1186/1471-2105-11-80
PMCID:
PMC2829014
AbstractArticlePDF–1.2M
12.
Characterization of zfs1 as an mRNA-binding and -destabilizing Protein in Schizosaccharomyces pombe
Brandon J. Cuthbertson, Yanhong Liao, Lutz Birnbaumer, Perry J. Blackshear
J Biol Chem. Author manuscript; available in PMC 2009 Sep 2.
Published in final edited form as: J Biol Chem. 2008 Feb 1; 283(5): 2586–2594. Published online 2007 Nov 27. doi: 10.1074/jbc.M707154200
PMCID:
PMC2736560
AbstractArticlePDF–756K
13.
Indistinguishable Landscapes of Meiotic DNA Breaks in rad50+ and rad50S Strains of Fission Yeast Revealed by a Novel rad50+ Recombination Intermediate
Randy W. Hyppa, Gareth A. Cromie, Gerald R. Smith
PLoS Genet. 2008 Nov; 4(11): e1000267. Published online 2008 Nov 21. doi: 10.1371/journal.pgen.1000267
PMCID:
PMC2580034
AbstractArticlePDF–567K
14.
Highly expressed proteins have an increased frequency of alanine in the second amino acid position
Age Tats, Maido Remm, Tanel Tenson
BMC Genomics. 2006; 7: 28. Published online 2006 Feb 16. doi: 10.1186/1471-2164-7-28
PMCID:
PMC1397820
AbstractArticlePDF–1.2M
15.
Identification of programmed translational -1 frameshifting sites in the genome of Saccharomyces cerevisiae
Michaël Bekaert, Hugues Richard, Bernard Prum, Jean-Pierre Rousset
Genome Res. 2005 Oct; 15(10): 1411–1420. doi: 10.1101/gr.4258005
Retraction in:
Genome Res. 2006 Aug; 16(8): 1074.
PMCID:
PMC1240084
AbstractArticle
16.
Comparative analysis of the base biases at the gene terminal portions in seven eukaryote genomes
Yoshihito Niimura, Mahito Terabe, Takashi Gojobori, Kin-ichiro Miura
Nucleic Acids Res. 2003 Sep 1; 31(17): 5195–5201. doi: 10.1093/nar/gkg701
PMCID:
PMC212801
AbstractArticlePDF–436K
17.
SAC3 may link nuclear protein export to cell cycle progression
Amy L. Jones, B. Booth Quimby, Jennifer K. Hood, Paul Ferrigno, Praveen H. Keshava, Pamela A. Silver, Anita H. Corbett
Proc Natl Acad Sci U S A. 2000 Mar 28; 97(7): 3224–3229. Published online 2000 Mar 14. doi: 10.1073/pnas.050432997
PMCID:
PMC16220
AbstractArticlePDF–252K

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