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Items: 1 to 20 of 59

1.
Systematic Nucleotide Exchange Analysis of ESTs From the Human Cancer Genome Project Report: Origins of 347 Unknown ESTs Indicate Putative Transcription of Non-Coding Genomic Regions
Ganesh Warthi, Pierre-Edouard Fournier, Hervé Seligmann
Front Genet. 2020; 11: 42. Published online 2020 Feb 11. doi: 10.3389/fgene.2020.00042
PMCID:
PMC7027195
AbstractArticlePDF–1.2M
2.
SSEA3 and Sialyl Lewis a Glycan Expression Is Controlled by B3GALT5 LTR through Lamin A-NFYA and SIRT1-STAT3 Signaling in Human ES Cells
Bi-He Cai, Hsueh-Yi Lee, Chi-Kan Chou, Po-Han Wu, Hsiang-Chi Huang, Chia-Chun Chao, Hsiao-Yu Chung, Reiji Kannagi
Cells. 2020 Jan; 9(1): 177. Published online 2020 Jan 10. doi: 10.3390/cells9010177
PMCID:
PMC7017369
AbstractArticlePDF–3.7M
3.
ClinGen Myeloid Malignancy Variant Curation Expert Panel recommendations for germline RUNX1 variants
Xi Luo, Simone Feurstein, Shruthi Mohan, Christopher C. Porter, Sarah A. Jackson, Sioban Keel, Michael Chicka, Anna L. Brown, Chimene Kesserwan, Anupriya Agarwal, Minjie Luo, Zejuan Li, Justyne E. Ross, Panagiotis Baliakas, Daniel Pineda-Alvarez, Courtney D. DiNardo, Alison A. Bertuch, Nikita Mehta, Tom Vulliamy, Ying Wang, Kim E. Nichols, Luca Malcovati, Michael F. Walsh, Lesley H. Rawlings, Shannon K. McWeeney, Jean Soulier, Anna Raimbault, Mark J. Routbort, Liying Zhang, Gabriella Ryan, Nancy A. Speck, Sharon E. Plon, David Wu, Lucy A. Godley
Blood Adv. 2019 Oct 22; 3(20): 2962–2979. Published online 2019 Oct 16. doi: 10.1182/bloodadvances.2019000644
PMCID:
PMC6849945
AbstractArticlePDF–1.0M
4.
MicroRNA 452 Regulates Cell Proliferation, Cell Migration, and Angiogenesis in Colorectal Cancer by Suppressing VEGFA Expression
Ji Su Mo, Won Cheol Park, Suck-Chei Choi, Ki Jung Yun, Soo-Cheon Chae
Cancers (Basel) 2019 Oct; 11(10): 1613. Published online 2019 Oct 22. doi: 10.3390/cancers11101613
PMCID:
PMC6826374
AbstractArticlePDF–3.8M
5.
TMPRSS2-ERG activates NO-cGMP signaling in prostate cancer cells
Feng Zhou, Shuai Gao, Dong Han, Wanting Han, Sujun Chen, Susan Patalano, Jill A. Macoska, Housheng Hansen He, Changmeng Cai
Oncogene. 2019; 38(22): 4397–4411. Published online 2019 Feb 4. doi: 10.1038/s41388-019-0730-9
PMCID:
PMC6542710
AbstractArticlePDF–3.8M
6.
Genetic analysis of pharmacogenomic VIP variants in the Blang population from Yunnan Province of China
Chan Zhang, Weiwei Guo, Yujing Cheng, Qi Li, Xin Yang, Run Dai, Linhao Zhu, Wanlu Chen
Mol Genet Genomic Med. 2019 May; 7(5): e574. Published online 2019 Apr 5. doi: 10.1002/mgg3.574
PMCID:
PMC6503013
AbstractArticlePDF–1.2M
7.
Methylation Changes of Primary Tumors, Monolayer, and Spheroid Tissue Culture Environments in Malignant Melanoma and Breast Carcinoma
Özge Şükrüoğlu Erdoğan, Seda Kılıç Erciyas, Ayhan Bilir, Şeref Buğra Tunçer, Demet Akdeniz Ödemiş, Sıdıka Kurul, Hasan Karanlık, Neslihan Cabıoğlu, Hülya Yazıcı
Biomed Res Int. 2019; 2019: 1407167. Published online 2019 Jan 17. doi: 10.1155/2019/1407167
PMCID:
PMC6354143
AbstractArticlePDF–1.1M
8.
Identification of differentially expressed non-coding RNAs and mRNAs involved in Qi stagnation and blood stasis syndrome
Guang Chen, Jialiang Gao, Haoqiang He, Chao Liu, Yongmei Liu, Jun Li, Jie Wang
Exp Ther Med. 2019 Feb; 17(2): 1206–1223. Published online 2018 Dec 7. doi: 10.3892/etm.2018.7068
PMCID:
PMC6327641
AbstractArticlePDF–3.7M
9.
RNA-mediated gene fusion in mammalian cells
Sachin Kumar Gupta, Liming Luo, Laising Yen
Proc Natl Acad Sci U S A. 2018 Dec 26; 115(52): E12295–E12304. Published online 2018 Dec 11. doi: 10.1073/pnas.1814704115
PMCID:
PMC6310785
AbstractArticlePDF–2.2M
10.
A genome-wide search for new imprinted genes in the human placenta identifies DSCAM as the first imprinted gene on chromosome 21
Laïla Allach El Khattabi, Stéphanie Backer, Amélie Pinard, Marie-Noëlle Dieudonné, Vassilis Tsatsaris, Daniel Vaiman, Luisa Dandolo, Evelyne Bloch-Gallego, Hélène Jammes, Sandrine Barbaux
Eur J Hum Genet. 2019 Jan; 27(1): 49–60. Published online 2018 Sep 11. doi: 10.1038/s41431-018-0267-3
PMCID:
PMC6303248
AbstractArticlePDF–2.1M
11.
The short-sequence design of DNA and its involvement in the 3-D structure of the genome
Guillermo Lamolle, Victor Sabbia, Héctor Musto, Giorgio Bernardi
Sci Rep. 2018; 8: 17820. Published online 2018 Dec 13. doi: 10.1038/s41598-018-35864-9
PMCID:
PMC6292894
AbstractArticlePDF–3.4M
12.
Nuclear receptor ERRα and transcription factor ERG form a reciprocal loop in the regulation of TMPRSS2:ERG fusion gene in prostate cancer
Zhenyu Xu, Yuliang Wang, Zhan Gang Xiao, Chang Zou, Xian Zhang, Zhu Wang, Dinglan Wu, Shan Yu, Franky Leung Chan
Oncogene. 2018; 37(48): 6259–6274. Published online 2018 Jul 24. doi: 10.1038/s41388-018-0409-7
PMCID:
PMC6265259
AbstractArticlePDF–4.4M
13.
SWIFOLD: Smith-Waterman implementation on FPGA with OpenCL for long DNA sequences
Enzo Rucci, Carlos Garcia, Guillermo Botella, Armando De Giusti, Marcelo Naiouf, Manuel Prieto-Matias
BMC Syst Biol. 2018; 12(Suppl 5): 96. Published online 2018 Nov 20. doi: 10.1186/s12918-018-0614-6
PMCID:
PMC6245597
AbstractArticlePDF–746K
14.
Binding of TMPRSS2-ERG to BAF chromatin remodeling complexes mediates prostate oncogenesis
Gabriel J. Sandoval, John L. Pulice, Hubert Pakula, Monica A. Schenone, David Y. Takeda, Marius Pop, Gaylor Boulay, Kaylyn E. Williamson, Matthew J. McBride, Joshua Pan, Roodolph St. Pierre, Emily Hartman, Levi A. Garraway, Steven A. Carr, Miguel N. Rivera, Zhe Li, Lucienne Ronco, William C. Hahn, Cigall Kadoch
Mol Cell. Author manuscript; available in PMC 2019 Aug 16.
Published in final edited form as: Mol Cell. 2018 Aug 16; 71(4): 554–566.e7. Published online 2018 Aug 2. doi: 10.1016/j.molcel.2018.06.040
PMCID:
PMC6140332
AbstractArticlePDF–2.4M
15.
DeepSimulator: a deep simulator for Nanopore sequencing
Yu Li, Renmin Han, Chongwei Bi, Mo Li, Sheng Wang, Xin Gao
Bioinformatics. 2018 Sep 1; 34(17): 2899–2908. Published online 2018 Apr 6. doi: 10.1093/bioinformatics/bty223
PMCID:
PMC6129308
AbstractArticlePDF–615K
16.
Deep mutational scanning of hemagglutinin helps predict evolutionary fates of human H3N2 influenza variants
Juhye M. Lee, John Huddleston, Michael B. Doud, Kathryn A. Hooper, Nicholas C. Wu, Trevor Bedford, Jesse D. Bloom
Proc Natl Acad Sci U S A. 2018 Aug 28; 115(35): E8276–E8285. Published online 2018 Aug 13. doi: 10.1073/pnas.1806133115
PMCID:
PMC6126756
AbstractArticlePDF–1.9M
17.
Rapid whole-genome sequencing identifies a novel AIRE variant associated with autoimmune polyendocrine syndrome type 1
Erica Sanford, Kelly Watkins, Shareef Nahas, Michael Gottschalk, Nicole G. Coufal, Lauge Farnaes, David Dimmock, Stephen F. Kingsmore, on behalf of the RCIGM Investigators
Cold Spring Harb Mol Case Stud. 2018 Jun; 4(3): a002485. doi: 10.1101/mcs.a002485
PMCID:
PMC5983174
AbstractArticlePDF–830K
18.
Evaluation of extraction methods for methylated cell-free fetal DNA from maternal plasma
Ji Hyae Lim, Bom Yi Lee, Jin Woo Kim, You Jung Han, Jin Hoon Chung, Min Hyoung Kim, Dong Wook Kwak, So Yeon Park, Hee Back Choi, Hyun Mee Ryu
J Assist Reprod Genet. 2018 Apr; 35(4): 637–641. Published online 2018 Feb 8. doi: 10.1007/s10815-018-1114-8
PMCID:
PMC5949107
AbstractArticlePDF–353K
19.
BRD4 Promotes DNA Repair and Mediates the Formation of TMPRSS2-ERG Gene Rearrangements in Prostate Cancer
Xiangyi Li, GuemHee Baek, Susmita G. Ramanand, Adam Sharp, Yunpeng Gao, Wei Yuan, Jon Welti, Daniel N. Rodrigues, David Dolling, Ines Figueiredo, Semini Sumanasuriya, Mateus Crespo, Adam Aslam, Rui Li, Yi Yin, Bipasha Mukherjee, Mohammed Kanchwala, Ashley M. Hughes, Wendy S. Halsey, Cheng-Ming Chiang, Chao Xing, Ganesh V. Raj, Sandeep Burma, Johann de Bono, Ram S. Mani
Cell Rep. Author manuscript; available in PMC 2018 Mar 8.
Published in final edited form as: Cell Rep. 2018 Jan 16; 22(3): 796–808. doi: 10.1016/j.celrep.2017.12.078
PMCID:
PMC5843368
AbstractArticlePDF–935K
20.
Integrase Defective Lentiviral Vector as a Vaccine Platform for Delivering Influenza Antigens
Alessandra Gallinaro, Martina Borghi, Roberta Bona, Felicia Grasso, Laura Calzoletti, Laura Palladino, Serena Cecchetti, Maria Fenicia Vescio, Daniele Macchia, Valeria Morante, Andrea Canitano, Nigel Temperton, Maria Rita Castrucci, Mirella Salvatore, Zuleika Michelini, Andrea Cara, Donatella Negri
Front Immunol. 2018; 9: 171. Published online 2018 Feb 5. doi: 10.3389/fimmu.2018.00171
PMCID:
PMC5807328
AbstractArticlePDF–1.2M

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