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Items: 1 to 20 of 23

1.
Depletion of CPNE7 sensitizes colorectal cancer to 5‐fluorouracil by downregulating ATG9B expression
Weile Xu, Yujie Tang, Yang Yang, Changjing Wang, Chen Liu, Jianqing Zhang, Lianmei Zhao, Guiying Wang
J Cell Mol Med. 2024 Apr; 28(8): e18261. Published online 2024 Mar 25. doi: 10.1111/jcmm.18261
PMCID:
PMC10962129
AbstractArticlePDF–25M
2.
ATG9B is a tissue-specific homotrimeric lipid scramblase that can compensate for ATG9A
George N. Chiduza, Acely Garza-Garcia, Eugenia Almacellas, Stefano De Tito, Valerie E Pye, Alexander R. van Vliet, Peter Cherepanov, Sharon A. Tooze
Autophagy. 2024; 20(3): 557–576. Published online 2023 Nov 8. doi: 10.1080/15548627.2023.2275905
PMCID:
PMC10936676
AbstractArticlePDF–6.1M
3.
Histone deacetylase inhibitors inhibit cervical cancer growth through Parkin acetylation-mediated mitophagy
Xin Sun, Yuhan Shu, Guiqin Ye, Caixia Wu, Mengting Xu, Ruilan Gao, Dongsheng Huang, Jianbin Zhang
Acta Pharm Sin B. 2022 Feb; 12(2): 838–852. Published online 2021 Jul 21. doi: 10.1016/j.apsb.2021.07.003
PMCID:
PMC8897022
AbstractArticlePDF–3.0M
4.
MYH9-dependent polarization of ATG9B promotes colorectal cancer metastasis by accelerating focal adhesion assembly
Yan Zhong, Ting Long, Chuan-Sha Gu, Jing-Yi Tang, Ling-Fang Gao, Jia-Xian Zhu, Zhi-Yan Hu, Xia Wang, Yi-Dan Ma, Yan-Qing Ding, Zu-Guo Li, Xiao-Yan Wang
Cell Death Differ. 2021 Dec; 28(12): 3251–3269. Published online 2021 Jun 15. doi: 10.1038/s41418-021-00813-z
PMCID:
PMC8629984
AbstractArticlePDF–9.8M
5.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
6.
Aging is associated with a decline in Atg9b‐mediated autophagosome formation and appearance of enlarged mitochondria in the heart
Wenjing Liang, Alexandra G. Moyzis, Mark A. Lampert, Rachel Y. Diao, Rita H. Najor, Åsa B. Gustafsson
Aging Cell. 2020 Aug; 19(8): e13187. Published online 2020 Jul 6. doi: 10.1111/acel.13187
PMCID:
PMC7431832
AbstractArticlePDF–2.4M
7.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
8.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
9.
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2016 Jul 16.
Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043
PMCID:
PMC4617211
AbstractArticlePDF–2.2M
10.
Human Immunodeficiency Virus Type 1 Nef Inhibits Autophagy through Transcription Factor EB Sequestration
Grant R. Campbell, Pratima Rawat, Rachel S. Bruckman, Stephen A. Spector
PLoS Pathog. 2015 Jun; 11(6): e1005018. Published online 2015 Jun 26. doi: 10.1371/journal.ppat.1005018
PMCID:
PMC4482621
AbstractArticlePDF–6.9M
11.
Polymorphisms in Autophagy Genes and Susceptibility to Tuberculosis
Mario Songane, Johanneke Kleinnijenhuis, Bachti Alisjahbana, Edhyana Sahiratmadja, Ida Parwati, Marije Oosting, Theo S. Plantinga, Leo A. B. Joosten, Mihai G. Netea, Tom H. M. Ottenhoff, Esther van de Vosse, Reinout van Crevel
PLoS One. 2012; 7(8): e41618. Published online 2012 Aug 6. doi: 10.1371/journal.pone.0041618
PMCID:
PMC3412843
AbstractArticlePDF–191K
12.
Genetic Polymorphisms in Oxidative Stress Pathway Genes and Modification of BMI and Risk of Non-Hodgkin Lymphoma
Christopher Kim, Tongzhang Zheng, Qing Lan, Yingtai Chen, Francine Foss, Xuezhong Chen, Theodore Holford, Brian Leaderer, Peter Boyle, Stephen J. Chanock, Nathaniel Rothman, Yawei Zhang
Cancer Epidemiol Biomarkers Prev. Author manuscript; available in PMC 2013 May 1.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2012 May; 21(5): 866–868. Published online 2012 Feb 28. doi: 10.1158/1055-9965.EPI-12-0010
PMCID:
PMC3394153
AbstractArticlePDF–275K
13.
Induction of Cellular Senescence by Doxorubicin Is Associated with Upregulated miR-375 and Induction of Autophagy in K562 Cells
Ming-Yu Yang, Pai-Mei Lin, Yi-Chang Liu, Hui-Hua Hsiao, Wen-Chi Yang, Jui-Feng Hsu, Cheng-Ming Hsu, Sheng-Fung Lin
PLoS One. 2012; 7(5): e37205. Published online 2012 May 11. doi: 10.1371/journal.pone.0037205
PMCID:
PMC3350486
AbstractArticlePDF–1.2M
14.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
15.
Risk of Meningioma and Common Variation in Genes related to Innate Immunity
Preetha Rajaraman, Alina V. Brenner, Gila Neta, Ruth Pfeiffer, Sophia S. Wang, Meredith Yeager, Gilles Thomas, Howard A. Fine, Martha S. Linet, Nathaniel Rothman, Stephen J. Chanock, Peter D. Inskip
Cancer Epidemiol Biomarkers Prev. Author manuscript; available in PMC 2011 Sep 7.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2010 May; 19(5): 1356–1361. Published online 2010 Apr 20. doi: 10.1158/1055-9965.EPI-09-1151
PMCID:
PMC3169167
AbstractArticlePDF–61K
16.
Polymorphisms in innate immunity genes and risk of childhood leukemia
Sohee Han, Qing Lan, Ae Kyung Park, Kyoung-Mu Lee, Sue K. Park, Hyo Seop Ahn, Hee Young Shin, Hyoung Jin Kang, Hong Hoe Koo, Jong Jin Seo, Ji Eun Choi, Yoon-Ok Ahn, Stephen J. Chanock, Ho Kim, Nathaniel Rothman, Daehee Kang
Hum Immunol. Author manuscript; available in PMC 2010 Nov 2.
Published in final edited form as: Hum Immunol. 2010 Jul; 71(7): 727–730. Published online 2010 May 16. doi: 10.1016/j.humimm.2010.04.004
PMCID:
PMC2967770
AbstractArticlePDF–306K
17.
Genetic polymorphisms in nitric oxide synthase genes modify the relationship between vegetable and fruit intake and risk of non-Hodgkin lymphoma
Xuesong Han, Tongzhang Zheng, Qing Lan, Yaqun Zhang, Briseis A. Kilfoy, Qin Qin, Nathaniel Rothman, Shelia H. Zahm, Theodore R. Holford, Brian Leaderer, Yawei Zhang
Cancer Epidemiol Biomarkers Prev. Author manuscript; available in PMC 2010 Oct 28.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2009 May; 18(5): 1429–1438. doi: 10.1158/1055-9965.EPI-09-0001
PMCID:
PMC2965355
AbstractArticlePDF–67K
18.
Variation at the NFATC2 Locus Increases the Risk of Thiazolidinedione-Induced Edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) Study
Swneke D. Bailey, Changchun Xie, Ron Do, Alexandre Montpetit, Rafael Diaz, Viswanathan Mohan, Bernard Keavney, Salim Yusuf, Hertzel C. Gerstein, James C. Engert, Sonia Anand, on behalf of the DREAM investigators
Diabetes Care. 2010 Oct; 33(10): 2250–2253. Published online 2010 Jul 13. doi: 10.2337/dc10-0452
PMCID:
PMC2945168
AbstractArticlePDF–153K
19.
Identification of Type 2 Diabetes-associated combination of SNPs using Support Vector Machine
Hyo-Jeong Ban, Jee Yeon Heo, Kyung-Soo Oh, Keun-Joon Park
BMC Genet. 2010; 11: 26. Published online 2010 Apr 23. doi: 10.1186/1471-2156-11-26
PMCID:
PMC2875201
AbstractArticlePDF–1.0M
20.
An Integrative Predictive Model of Coronary Artery Calcification in Arteriosclerosis
Michael McGeachie, Rachel L Badovinac Ramoni, Josyf C. Mychaleckyj, Karen L Furie, Jonathan M. Dreyfuss, Yongmei Liu, David Herrington, Xiuqing Guo, João A. Lima, Wendy Post, Jerome I. Rotter, Stephen Rich, Michèle Sale, Marco F. Ramoni
Circulation. Author manuscript; available in PMC 2010 Dec 15.
Published in final edited form as: Circulation. 2009 Dec 15; 120(24): 2448–2454. doi: 10.1161/CIRCULATIONAHA.109.865501
PMCID:
PMC2810344
AbstractArticlePDF–448K

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