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Items: 1 to 20 of 29

1.
Effects of COL1A1 and SYTL2 on inflammatory cell infiltration and poor extracellular matrix remodeling of the vascular wall in thoracic aortic aneurysm
Xinsheng Xie, Ye Yuan, Yulong Huang, Xiang Hong, Shichai Hong, Gang Chen, Yihui Chen, Yue Lin, Weifeng Lu, Weiguo Fu, Lixin Wang
Chin Med J (Engl) 2024 May 5; 137(9): 1105–1114. Published online 2023 Aug 28. doi: 10.1097/CM9.0000000000002808
PMCID:
PMC11062686
AbstractArticlePDF–18M
2.
SYTL2 promotes metastasis of prostate cancer cells by enhancing FSCN1-mediated pseudopodia formation and invasion
Zean Li, Yiran Tao, Ze Gao, Shirong Peng, Yiming Lai, Kaiwen Li, Xu Chen, Hai Huang
J Transl Med. 2023; 21: 303. Published online 2023 May 5. doi: 10.1186/s12967-023-04146-y
PMCID:
PMC10161564
AbstractArticlePDF–5.7M
3.
Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery
Pierre C. Havugimana, Raghuveera Kumar Goel, Sadhna Phanse, Ahmed Youssef, Dzmitry Padhorny, Sergei Kotelnikov, Dima Kozakov, Andrew Emili
Nat Commun. 2022; 13: 4043. Published online 2022 Jul 13. doi: 10.1038/s41467-022-31809-z
PMCID:
PMC9279285
AbstractArticlePDF–2.5M
4.
An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity
Yuehui Zhang, Limin Shang, Jing Zhang, Yuchen Liu, Chaozhi Jin, Yanan Zhao, Xiaobo Lei, Wenjing Wang, Xia Xiao, Xiuyuan Zhang, Yujiao Liu, Linlin Liu, Meng-Wei Zhuang, Qingkun Mi, Chunyan Tian, Jianwei Wang, Fuchu He, Pei-Hui Wang, Jian Wang
Cell Chem Biol. 2022 Jan 20; 29(1): 5–18.e6. Published online 2021 Oct 20. doi: 10.1016/j.chembiol.2021.10.008
PMCID:
PMC8527578
AbstractArticlePDF–4.5M
5.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
6.
Synaptotagmin-like protein 2a regulates angiogenic lumen formation via Weibel-Palade body apical secretion of angiopoietin-2
Caitlin R. Francis, Shea Claflin, Erich J. Kushner
Arterioscler Thromb Vasc Biol. Author manuscript; available in PMC 2022 Jun 1.
Published in final edited form as: Arterioscler Thromb Vasc Biol. 2021 Jun; 41(6): 1972–1986. Published online 2021 Apr 15. doi: 10.1161/ATVBAHA.121.316113
PMCID:
PMC8159857
AbstractArticlePDF–3.6M
7.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
8.
Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei
Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck
Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924
PMCID:
PMC6166682
AbstractArticlePDF–3.8M
9.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
10.
hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes
Philippe Lamesch, Ning Li, Stuart Milstein, Changyu Fan, Tong Hao, Gabor Szabo, Zhenjun Hu, Kavitha Venkatesan, Graeme Bethel, Paul Martin, Jane Rogers, Stephanie Lawlor, Stuart McLaren, Amélie Dricot, Heather Borick, Michael E. Cusick, Jean Vandenhaute, Ian Dunham, David E. Hill, Marc Vidal
Genomics. 2007 Mar; 89(3): 307–315. doi: 10.1016/j.ygeno.2006.11.012
PMCID:
PMC4647941
AbstractArticle
11.
Systematic Analysis of the Protein Interaction Network for the Human Transcription Machinery Reveals the Identity of the 7SK Capping Enzyme
Célia Jeronimo, Diane Forget, Annie Bouchard, Qintong Li, Gordon Chua, Christian Poitras, Cynthia Thérien, Dominique Bergeron, Sylvie Bourassa, Jack Greenblatt, Benoit Chabot, Guy G. Poirier, Timothy R. Hughes, Mathieu Blanchette, David H. Price, Benoit Coulombe
Mol Cell. Author manuscript; available in PMC 2015 Jul 10.
Published in final edited form as: Mol Cell. 2007 Jul 20; 27(2): 262–274. doi: 10.1016/j.molcel.2007.06.027
PMCID:
PMC4498903
AbstractArticlePDF–1.5M
12.
Rab27a controls HIV-1 assembly by regulating plasma membrane levels of phosphatidylinositol 4,5-bisphosphate
Pehuén Pereyra Gerber, Mercedes Cabrini, Carolina Jancic, Luciana Paoletti, Claudia Banchio, Catalina von Bilderling, Lorena Sigaut, Lía I. Pietrasanta, Gabriel Duette, Eric O. Freed, Genevieve de Saint Basile, Catarina Ferreira Moita, Luis Ferreira Moita, Sebastian Amigorena, Philippe Benaroch, Jorge Geffner, Matías Ostrowski
J Cell Biol. 2015 May 11; 209(3): 435–452. doi: 10.1083/jcb.201409082
PMCID:
PMC4427790
AbstractArticlePDF–3.5M
13.
The F-box Protein FBXO25 Promotes the Proteasome-dependent Degradation of ELK-1 Protein
Felipe R. Teixeira, Adriana O. Manfiolli, Cláudia S. Soares, Munira M. A. Baqui, Tie Koide, Marcelo D. Gomes
J Biol Chem. 2013 Sep 27; 288(39): 28152–28162. Published online 2013 Aug 12. doi: 10.1074/jbc.M113.504308
PMCID:
PMC3784726
AbstractArticlePDF–856K
14.
Synaptotagmin-Like Proteins Control Formation of a Single Apical Membrane Domain in Epithelial Cells
Manuel Gálvez-Santisteban, Alejo E. Rodriguez-Fraticelli, David M. Bryant, Silvia Vergarajauregui, Takao Yasuda, Inmaculada Bañón-Rodríguez, Ilenia Bernascone, Anirban Datta, Natalie Spivak, Kitty Young, Christiaan L. Slim, Paul R. Brakeman, Mitsunori Fukuda, Keith E. Mostov, Fernando Martín-Belmonte
Nat Cell Biol. Author manuscript; available in PMC 2013 Feb 1.
Published in final edited form as: Nat Cell Biol. 2012 Aug; 14(8): 838–849. Published online 2012 Jul 22. doi: 10.1038/ncb2541
PMCID:
PMC3433678
AbstractArticlePDF–3.3M
15.
Deregulation of Rab and Rab Effector Genes in Bladder Cancer
Joel R. Ho, Elodie Chapeaublanc, Lisa Kirkwood, Remy Nicolle, Simone Benhamou, Thierry Lebret, Yves Allory, Jennifer Southgate, François Radvanyi, Bruno Goud
PLoS One. 2012; 7(6): e39469. Published online 2012 Jun 19. doi: 10.1371/journal.pone.0039469
PMCID:
PMC3378553
AbstractArticlePDF–849K
16.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
17.
Calmodulin Suppresses Synaptotagmin-2 Transcription in Cortical Neurons
Zhiping P. Pang, Wei Xu, Peng Cao, Thomas C. Südhof
J Biol Chem. 2010 Oct 29; 285(44): 33930–33939. Published online 2010 Aug 20. doi: 10.1074/jbc.M110.150151
PMCID:
PMC2962493
AbstractArticlePDF–1.8M
18.
A Comprehensive Resource of Interacting Protein Regions for Refining Human Transcription Factor Networks
Etsuko Miyamoto-Sato, Shigeo Fujimori, Masamichi Ishizaka, Naoya Hirai, Kazuyo Masuoka, Rintaro Saito, Yosuke Ozawa, Katsuya Hino, Takanori Washio, Masaru Tomita, Tatsuhiro Yamashita, Tomohiro Oshikubo, Hidetoshi Akasaka, Jun Sugiyama, Yasuo Matsumoto, Hiroshi Yanagawa
PLoS One. 2010; 5(2): e9289. Published online 2010 Feb 24. doi: 10.1371/journal.pone.0009289
PMCID:
PMC2827538
AbstractArticlePDF–676K
19.
A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene
Ji Luo, Michael J. Emanuele, Danan Li, Chad J. Creighton, Michael R. Schlabach, Thomas F. Westbrook, Kwok-kin Wong, Stephen J. Elledge
Cell. Author manuscript; available in PMC 2009 Nov 29.
Published in final edited form as: Cell. 2009 May 29; 137(5): 835–848. doi: 10.1016/j.cell.2009.05.006
PMCID:
PMC2768667
AbstractArticlePDF–4.0M
20.
Dysferlin Deficiency Shows Compensatory Induction of Rab27A/Slp2a That May Contribute to Inflammatory Onset
Akanchha Kesari, Mitsunori Fukuda, Susan Knoblach, Rumaisa Bashir, Gustavo A. Nader, Deepak Rao, Kanneboyina Nagaraju, Eric P. Hoffman
Am J Pathol. 2008 Nov; 173(5): 1476–1487. doi: 10.2353/ajpath.2008.080098
PMCID:
PMC2570137
AbstractArticlePDF–1.8M

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