PMC Links for GEO Profiles (Select 108836779) - PMC

Links from GEO Profiles

Items: 1 to 20 of 22

<< First< Prev

Page of 2

Select item 81650301.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 71699832.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 61666823.

Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei

Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck

Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924

PMCID:: PMC6166682

Abstract Article PDF–3.8M

Select item 55316114.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 54952255.

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing

Teng Fei, Yiwen Chen, Tengfei Xiao, Wei Li, Laura Cato, Peng Zhang, Maura B. Cotter, Michaela Bowden, Rosina T. Lis, Shuang G. Zhao, Qiu Wu, Felix Y. Feng, Massimo Loda, Housheng Hansen He, X. Shirley Liu, Myles Brown

Proc Natl Acad Sci U S A. 2017 Jun 27; 114(26): E5207–E5215. Published online 2017 Jun 13. doi: 10.1073/pnas.1617467114

PMCID:: PMC5495225

Abstract Article PDF–1.3M

Select item 46172116.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 42665887.

A proteome-scale map of the human interactome network

Thomas Rolland, Murat Taşan, Benoit Charloteaux, Samuel J. Pevzner, Quan Zhong, Nidhi Sahni, Song Yi, Irma Lemmens, Celia Fontanillo, Roberto Mosca, Atanas Kamburov, Susan D. Ghiassian, Xinping Yang, Lila Ghamsari, Dawit Balcha, Bridget E. Begg, Pascal Braun, Marc Brehme, Martin P. Broly, Anne-Ruxandra Carvunis, Dan Convery-Zupan, Roser Corominas, Jasmin Coulombe-Huntington, Elizabeth Dann, Matija Dreze, Amélie Dricot, Changyu Fan, Eric Franzosa, Fana Gebreab, Bryan J. Gutierrez, Madeleine F. Hardy, Mike Jin, Shuli Kang, Ruth Kiros, Guan Ning Lin, Katja Luck, Andrew MacWilliams, Jörg Menche, Ryan R. Murray, Alexandre Palagi, Matthew M. Poulin, Xavier Rambout, John Rasla, Patrick Reichert, Viviana Romero, Elien Ruyssinck, Julie M. Sahalie, Annemarie Scholz, Akash A. Shah, Amitabh Sharma, Yun Shen, Kerstin Spirohn, Stanley Tam, Alexander O. Tejeda, Shelly A. Wanamaker, Jean-Claude Twizere, Kerwin Vega, Jennifer Walsh, Michael E. Cusick, Yu Xia, Albert-László Barabási, Lilia M. Iakoucheva, Patrick Aloy, Javier De Las Rivas, Jan Tavernier, Michael A. Calderwood, David E. Hill, Tong Hao, Frederick P. Roth, Marc Vidal

Cell. Author manuscript; available in PMC 2015 Nov 20.

Published in final edited form as: Cell. 2014 Nov 20; 159(5): 1212–1226. doi: 10.1016/j.cell.2014.10.050

PMCID:: PMC4266588

Abstract Article PDF–3.1M

Select item 42141298.

Genome-Wide Association Identifies Regulatory Loci Associated with Distinct Local Histogram Emphysema Patterns

Peter J. Castaldi, Michael H. Cho, Raúl San José Estépar, Merry-Lynn N. McDonald, Nan Laird, Terri H. Beaty, George Washko, James D. Crapo, Edwin K. Silverman

Am J Respir Crit Care Med. 2014 Aug 15; 190(4): 399–409. Published online 2014 Aug 15. doi: 10.1164/rccm.201403-0569OC

PMCID:: PMC4214129

Abstract Article PDF–1.2M

Select item 34805179.

Genome-Wide Association Studies Identify CHRNA5/3 and HTR4 in the Development of Airflow Obstruction

Jemma B. Wilk, Nick R. G. Shrine, Laura R. Loehr, Jing Hua Zhao, Ani Manichaikul, Lorna M. Lopez, Albert Vernon Smith, Susan R. Heckbert, Joanna Smolonska, Wenbo Tang, Daan W. Loth, Ivan Curjuric, Jennie Hui, Michael H. Cho, Jeanne C. Latourelle, Amanda P. Henry, Melinda Aldrich, Per Bakke, Terri H. Beaty, Amy R. Bentley, Ingrid B. Borecki, Guy G. Brusselle, Kristin M. Burkart, Ting-hsu Chen, David Couper, James D. Crapo, Gail Davies, Josée Dupuis, Nora Franceschini, Amund Gulsvik, Dana B. Hancock, Tamara B. Harris, Albert Hofman, Medea Imboden, Alan L. James, Kay-Tee Khaw, Lies Lahousse, Lenore J. Launer, Augusto Litonjua, Yongmei Liu, Kurt K. Lohman, David A. Lomas, Thomas Lumley, Kristin D. Marciante, Wendy L. McArdle, Bernd Meibohm, Alanna C. Morrison, Arthur W. Musk, Richard H. Myers, Kari E. North, Dirkje S. Postma, Bruce M. Psaty, Stephen S. Rich, Fernando Rivadeneira, Thierry Rochat, Jerome I. Rotter, María Soler Artigas, John M. Starr, André G. Uitterlinden, Nicholas J. Wareham, Cisca Wijmenga, Pieter Zanen, Michael A. Province, Edwin K. Silverman, Ian J. Deary, Lyle J. Palmer, Patricia A. Cassano, Vilmundur Gudnason, R. Graham Barr, Ruth J. F. Loos, David P. Strachan, Stephanie J. London, H. Marike Boezen, Nicole Probst-Hensch, Sina A. Gharib, Ian P. Hall, George T. O’Connor, Martin D. Tobin, Bruno H. Stricker

Am J Respir Crit Care Med. 2012 Oct 1; 186(7): 622–632. Published online 2012 Oct 1. doi: 10.1164/rccm.201202-0366OC

PMCID:: PMC3480517

Abstract Article PDF–770K

Select item 336894110.

Strong Association between Two Polymorphisms on 15q25.1 and Lung Cancer Risk: A Meta-Analysis

Mingliang Gu, Xiaoqun Dong, Xuezhi Zhang, Xumin Wang, Yue Qi, Jun Yu, Wenquan Niu

PLoS One. 2012; 7(6): e37970. Published online 2012 Jun 6. doi: 10.1371/journal.pone.0037970

PMCID:: PMC3368941

Abstract Article PDF–242K

Select item 330257611.

Genome-wide association study of smoking behaviors in COPD patients

Mateusz Siedlinski, Michael H. Cho, Per Bakke, Amund Gulsvik, David A. Lomas, Wayne Anderson, Xiangyang Kong, Stephen I. Rennard, Terri H. Beaty, John E. Hokanson, James D. Crapo, Edwin K. Silverman, the COPDGene and ECLIPSE Investigators

Thorax. Author manuscript; available in PMC 2012 Oct 1.

Published in final edited form as: Thorax. 2011 Oct; 66(10): 894–902. Published online 2011 Jun 16. doi: 10.1136/thoraxjnl-2011-200154

PMCID:: PMC3302576

Abstract Article PDF–1.2M

Select item 329354612.

Molecular Identification of Hydroxylysine Kinase and of Ammoniophospholyases Acting on 5-Phosphohydroxy-l-lysine and Phosphoethanolamine

Maria Veiga-da-Cunha, Farah Hadi, Thomas Balligand, Vincent Stroobant, Emile Van Schaftingen

J Biol Chem. 2012 Mar 2; 287(10): 7246–7255. Published online 2012 Jan 12. doi: 10.1074/jbc.M111.323485

PMCID:: PMC3293546

Abstract Article PDF–1.0M

Select item 317805913.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302684114.

Genetic variations on chromosomes 5p15 and 15q25 and bladder cancer risk: findings from the Los Angeles–Shanghai bladder case–control study

Manuela Gago-Dominguez, Xuejuan Jiang, David V. Conti, Jose Esteban Castelao, Mariana C. Stern, Victoria K. Cortessis, Malcolm C. Pike, Yong-Bing Xiang, Yu-Tang Gao, Jian-Min Yuan, David J. Van Den Berg

Carcinogenesis. 2011 Feb; 32(2): 197–202. Published online 2010 Nov 15. doi: 10.1093/carcin/bgq233

PMCID:: PMC3026841

Abstract Article PDF–86K

Select item 292812715.

Fine mapping of chromosome 15q25.1 lung cancer susceptibility in African-Americans

Helen M. Hansen, Yuanyuan Xiao, Terri Rice, Paige M. Bracci, Margaret R. Wrensch, Jennette D. Sison, Jeffery S. Chang, Ivan V. Smirnov, Joseph Patoka, Michael F. Seldin, Charles P. Quesenberry, Karl T. Kelsey, John K. Wiencke

Hum Mol Genet. 2010 Sep 15; 19(18): 3652–3661. Published online 2010 Jun 29. doi: 10.1093/hmg/ddq268

PMCID:: PMC2928127

Abstract Article PDF–215K

Select item 291476116.

Nicotinic Acetylcholine Receptor Region on Chromosome 15q25 and Lung Cancer Risk Among African Americans: A Case–Control Study

Christopher I. Amos, Ivan P. Gorlov, Qiong Dong, Xifeng Wu, Huifeng Zhang, Emily Y. Lu, Paul Scheet, Anthony J. Greisinger, Gordon B. Mills, Margaret R. Spitz

J Natl Cancer Inst. 2010 Aug 4; 102(15): 1199–1205. doi: 10.1093/jnci/djq232

PMCID:: PMC2914761

Abstract Article PDF–773K

Select item 289787717.

Replication of Lung Cancer Susceptibility Loci at Chromosomes 15q25, 5p15, and 6p21: A Pooled Analysis From the International Lung Cancer Consortium

Therese Truong, Rayjean J. Hung, Christopher I. Amos, Xifeng Wu, Heike Bickeböller, Albert Rosenberger, Wiebke Sauter, Thomas Illig, H.-Erich Wichmann, Angela Risch, Hendrik Dienemann, Rudolph Kaaks, Ping Yang, Ruoxiang Jiang, John K. Wiencke, Margaret Wrensch, Helen Hansen, Karl T. Kelsey, Keitaro Matsuo, Kazuo Tajima, Ann G. Schwartz, Angie Wenzlaff, Adeline Seow, Chen Ying, Andrea Staratschek-Jox, Peter Nürnberg, Erich Stoelben, Jürgen Wolf, Philip Lazarus, Joshua E. Muscat, Carla J. Gallagher, Shanbeh Zienolddiny, Aage Haugen, Henricus F. M. van der Heijden, Lambertus A. Kiemeney, Dolores Isla, Jose Ignacio Mayordomo, Thorunn Rafnar, Kari Stefansson, Zuo-Feng Zhang, Shen-Chih Chang, Jin Hee Kim, Yun-Chul Hong, Eric J. Duell, Angeline S. Andrew, Flavio Lejbkowicz, Gad Rennert, Heiko Müller, Hermann Brenner, Loïc Le Marchand, Simone Benhamou, Christine Bouchardy, M. Dawn Teare, Xiaoyan Xue, John McLaughlin, Geoffrey Liu, James D. McKay, Paul Brennan, Margaret R. Spitz

J Natl Cancer Inst. 2010 Jul 7; 102(13): 959–971. doi: 10.1093/jnci/djq178

PMCID:: PMC2897877

Abstract Article PDF–630K

Select item 275431818.

Deciphering the impact of common genetic variation on lung cancer risk: A genome-wide association study

Peter Broderick, Yufei Wang, Jayaram Vijayakrishnan, Athena Matakidou, Margaret R Spitz, Timothy Eisen, Christopher I. Amos, Richard S. Houlston

Cancer Res. Author manuscript; available in PMC 2010 Feb 15.

Published in final edited form as: Cancer Res. 2009 Aug 15; 69(16): 6633–6641. Published online 2009 Aug 4. doi: 10.1158/0008-5472.CAN-09-0680

PMCID:: PMC2754318

Abstract Article PDF–848K

Select item 271368019.

Genome-wide association scan of tag SNPs identifies a susceptibility locus for lung cancer at 15q25.1

Christopher I Amos, Xifeng Wu, Peter Broderick, Ivan P Gorlov, Jian Gu, Timothy Eisen, Qiong Dong, Qing Zhang, Xiangjun Gu, Jayaram Vijayakrishnan, Kate Sullivan, Athena Matakidou, Yufei Wang, Gordon Mills, Kimberly Doheny, Ya-Yu Tsai, Wei Vivien Chen, Sanjay Shete, Margaret R Spitz, Richard S Houlston

Nat Genet. Author manuscript; available in PMC 2009 Jul 21.

Published in final edited form as: Nat Genet. 2008 May; 40(5): 616–622. Published online 2008 Apr 2. doi: 10.1038/ng.109

PMCID:: PMC2713680

Abstract Article PDF–2.4M

Select item 265028220.

A Genome-Wide Association Study in Chronic Obstructive Pulmonary Disease (COPD): Identification of Two Major Susceptibility Loci

Sreekumar G. Pillai, Dongliang Ge, Guohua Zhu, Xiangyang Kong, Kevin V. Shianna, Anna C. Need, Sheng Feng, Craig P. Hersh, Per Bakke, Amund Gulsvik, Andreas Ruppert, Karin C. Lødrup Carlsen, Allen Roses, Wayne Anderson, ICGN Investigators, Stephen I. Rennard, David A. Lomas, Edwin K. Silverman, David B. Goldstein

PLoS Genet. 2009 Mar; 5(3): e1000421. Published online 2009 Mar 20. doi: 10.1371/journal.pgen.1000421

PMCID:: PMC2650282

Abstract Article PDF–228K

<< First< Prev

Page of 2

Next >Last >>

PMC

Result Filters

Article attributes

Text availability

Publication date

Custom date range

Research Funder

Additional filters

Display Settings:

Send to:

Links from GEO Profiles

Items: 1 to 20 of 22

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity