PMC Links for GEO Profiles (Select 109413530) - PMC

Select item 104323981.

ZFP36 loss-mediated BARX1 stabilization promotes malignant phenotypes by transactivating master oncogenes in NSCLC

Tongjia Zhang, Lizhen Qiu, Jiashun Cao, Qiu Li, Lifan Zhang, Guoshun An, Juhua Ni, Hongti Jia, Shuyan Li, Kailong Li

Cell Death Dis. 2023 Aug; 14(8): 527. Published online 2023 Aug 16. doi: 10.1038/s41419-023-06044-z

PMCID:: PMC10432398

Abstract Article PDF–3.5M

Select item 100189372.

BARX1 promotes osteosarcoma cell proliferation and invasion by regulating HSPA6 expression

Xing Huang, Zhenhua Wang, Jing Zhang, Xiangzhi Ni, Guangjian Bai, Jiashi Cao, Chunlei Zhang, Zhitao Han, Tielong Liu

J Orthop Surg Res. 2023; 18: 211. Published online 2023 Mar 16. doi: 10.1186/s13018-023-03690-z

PMCID:: PMC10018937

Abstract Article PDF–5.3M

Select item 83641813.

Protein interaction landscapes revealed by advanced in vivo cross-linking–mass spectrometry

Andrew Wheat, Clinton Yu, Xiaorong Wang, Anthony M. Burke, Ilan E. Chemmama, Robyn M. Kaake, Peter Baker, Scott D. Rychnovsky, Jing Yang, Lan Huang

Proc Natl Acad Sci U S A. 2021 Aug 10; 118(32): e2023360118. Published online 2021 Aug 4. doi: 10.1073/pnas.2023360118

PMCID:: PMC8364181

Abstract Article PDF–3.0M

Select item 79560564.

HAND1 and BARX1 act as transcriptional and anatomic determinants of malignancy in gastrointestinal stromal tumor

Matthew L. Hemming, Shannon Coy, Jia-Ren Lin, Jessica L. Andersen, Joanna Przybyl, Emanuele Mazzola, Amr H. Abdelhamid Ahmed, Matt van de Rijn, Peter K. Sorger, Scott A. Armstrong, George D. Demetri, Sandro Santagata

Clin Cancer Res. Author manuscript; available in PMC 2021 Sep 15.

Published in final edited form as: Clin Cancer Res. 2021 Mar 15; 27(6): 1706–1719. Published online 2021 Jan 15. doi: 10.1158/1078-0432.CCR-20-3538

PMCID:: PMC7956056

Abstract Article PDF–2.9M

Select item 63220725.

Genome-wide meta-analysis identifies BARX1 and EML4-MTA3 as new loci associated with infantile hypertrophic pyloric stenosis

João Fadista, Line Skotte, Frank Geller, Jonas Bybjerg-Grauholm, Sanne Gørtz, Paul A Romitti, Michele Caggana, Denise M Kay, Hans Matsson, Heather A Boyd, David M Hougaard, Agneta Nordenskjöld, James L Mills, Mads Melbye, Bjarke Feenstra

Hum Mol Genet. 2019 Jan 15; 28(2): 332–340. Published online 2018 Oct 2. doi: 10.1093/hmg/ddy347

PMCID:: PMC6322072

Abstract Article PDF–2.1M

Select item 58495346.

Genome-wide CRISPR-Cas9 screen identifies leukemia-specific dependence on a pre-mRNA metabolic pathway regulated by DCPS

Takuji Yamauchi, Takeshi Masuda, Matthew C. Canver, Michael Seiler, Yuichiro Semba, Mohammad Shboul, Mohammed Al-Raqad, Manami Maeda, Vivien A. C. Schoonenberg, Mitchel A. Cole, Claudio Macias-Trevino, Yuichi Ishikawa, Qiuming Yao, Michitaka Nakano, Fumio Arai, Stuart H. Orkin, Bruno Reversade, Silvia Buonamici, Luca Pinello, Koichi Akashi, Daniel E. Bauer, Takahiro Maeda

Cancer Cell. Author manuscript; available in PMC 2019 Mar 12.

Published in final edited form as: Cancer Cell. 2018 Mar 12; 33(3): 386–400.e5. Published online 2018 Feb 22. doi: 10.1016/j.ccell.2018.01.012

PMCID:: PMC5849534

Abstract Article PDF–1.1M

Select item 46739977.

Supportive evidence for FOXP1, BARX1, and FOXF1 as genetic risk loci for the development of esophageal adenocarcinoma

Jessica Becker, Andrea May, Christian Gerges, Mario Anders, Lothar Veits, Katharina Weise, Darina Czamara, Orestis Lyros, Hendrik Manner, Grischa Terheggen, Marino Venerito, Tania Noder, Rupert Mayershofer, Jan-Hinnerk Hofer, Hans-Werner Karch, Constantin J Ahlbrand, Michael Arras, Sebastian Hofer, Elisabeth Mangold, Stefanie Heilmann-Heimbach, Sophie K M Heinrichs, Timo Hess, Ralf Kiesslich, Jakob R Izbicki, Arnulf H Hölscher, Elfriede Bollschweiler, Peter Malfertheiner, Hauke Lang, Markus Moehler, Dietmar Lorenz, Bertram Müller-Myhsok, Katja Ott, Thomas Schmidt, David C Whiteman, Thomas L Vaughan, Markus M Nöthen, Andreas Hackelsberger, Brigitte Schumacher, Oliver Pech, Yogesh Vashist, Michael Vieth, Josef Weismüller, Horst Neuhaus, Thomas Rösch, Christian Ell, Ines Gockel, Johannes Schumacher

Cancer Med. 2015 Nov; 4(11): 1700–1704. Published online 2015 Aug 15. doi: 10.1002/cam4.500

PMCID:: PMC4673997

Abstract Article PDF–82K

Select item 43321508.

Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes

Xu Li, Wenqi Wang, Jiadong Wang, Anna Malovannaya, Yuanxin Xi, Wei Li, Rudy Guerra, David H Hawke, Jun Qin, Junjie Chen

Mol Syst Biol. 2015 Jan; 11(1): 775. Published online 2015 Jan 21. doi: 10.15252/msb.20145504

PMCID:: PMC4332150

Abstract Article PDF–2.8M

Select item 38401159.

A Genome-Wide Association Study Identifies New Susceptibility Loci for Esophageal Adenocarcinoma and Barrett’s Esophagus

David M. Levine, Weronica E. Ek, Rui Zhang, Xinxue Liu, Lynn Onstad, Cassandra Sather, Pierre Lao-Sirieix, Marilie D. Gammon, Douglas A. Corley, Nicholas J. Shaheen, Nigel C. Bird, Laura J. Hardie, Liam J. Murray, Brian J. Reid, Wong-Ho Chow, Harvey A. Risch, Olof Nyrén, Weimin Ye, Geoffrey Liu, Yvonne Romero, Leslie Bernstein, Anna H. Wu, Alan G. Casson, Stephen Chanock, Patricia Harrington, Isabel Caldas, Irene Debiram-Beecham, Carlos Caldas, Nicholas K. Hayward, Paul Pharoah, Rebecca Fitzgerald, Stuart MacGregor, David C. Whiteman, Thomas L. Vaughan

Nat Genet. Author manuscript; available in PMC 2014 Jun 1.

Published in final edited form as: Nat Genet. 2013 Dec; 45(12): 1487–1493. Published online 2013 Oct 13. doi: 10.1038/ng.2796

PMCID:: PMC3840115

Article PDF–1.5M

Select item 357913810.

Why do cellular proteins linked to K63-polyubiquitin chains not associate with proteasomes?

James A Nathan, Hyoung Tae Kim, Lily Ting, Steven P Gygi, Alfred L Goldberg

EMBO J. 2013 Feb 20; 32(4): 552–565. Published online 2013 Jan 11. doi: 10.1038/emboj.2012.354

PMCID:: PMC3579138

Abstract Article PDF–1.5M

Select item 326170811.

Toward an understanding of the protein interaction network of the human liver

Jian Wang, Keke Huo, Lixin Ma, Liujun Tang, Dong Li, Xiaobi Huang, Yanzhi Yuan, Chunhua Li, Wei Wang, Wei Guan, Hui Chen, Chaozhi Jin, Junchen Wei, Wanqiao Zhang, Yongsheng Yang, Qiongming Liu, Ying Zhou, Cuili Zhang, Zhihao Wu, Wangxiang Xu, Ying Zhang, Tao Liu, Donghui Yu, Yaping Zhang, Liang Chen, Dewu Zhu, Xing Zhong, Lixin Kang, Xiang Gan, Xiaolan Yu, Qi Ma, Jing Yan, Li Zhou, Zhongyang Liu, Yunping Zhu, Tao Zhou, Fuchu He, Xiaoming Yang

Mol Syst Biol. 2011; 7: 536. Published online 2011 Oct 11. doi: 10.1038/msb.2011.67

Correction in:: Mol Syst Biol. 2017 Dec; 13(12): 965.

PMCID:: PMC3261708

Abstract Article PDF–2.0M

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 290133613.

Maternal Genes and Facial Clefts in Offspring: A Comprehensive Search for Genetic Associations in Two Population-Based Cleft Studies from Scandinavia

Astanand Jugessur, Min Shi, Håkon Kristian Gjessing, Rolv Terje Lie, Allen James Wilcox, Clarice Ring Weinberg, Kaare Christensen, Abee Lowman Boyles, Sandra Daack-Hirsch, Truc Trung Nguyen, Lene Christiansen, Andrew Carl Lidral, Jeffrey Clark Murray

PLoS One. 2010; 5(7): e11493. Published online 2010 Jul 9. doi: 10.1371/journal.pone.0011493

PMCID:: PMC2901336

Abstract Article PDF–778K

Select item 273495414.

Candidate Gene/Loci Studies in Cleft Lip/Palate and Dental Anomalies Finds Novel Susceptibility Genes for Clefts

Alexandre R. Vieira, Toby G. McHenry, Sandra Daack-Hirsch, Jeffrey C. Murray, Mary L. Marazita

Genet Med. Author manuscript; available in PMC 2009 Aug 30.

Published in final edited form as: Genet Med. 2008 Sep; 10(9): 668–674. doi: 10.1097/GIM.0b013e3181833793

PMCID:: PMC2734954

Abstract Article PDF–50K

Select item 13924115.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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