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Select item 107030451.

More rapid blood interferon α2 decline in fatal versus surviving COVID-19 patients

Candie Joly, Delphine Desjardins, Raphael Porcher, Hélène Péré, Thomas Bruneau, Qian Zhang, Paul Bastard, Aurélie Cobat, Léa Resmini, Olivia Lenoir, Laurent Savale, Camille Lécuroux, Céline Verstuyft, Anne-Marie Roque-Afonso, David Veyer, Gabriel Baron, Matthieu Resche-Rigon, Philippe Ravaud, Jean-Laurent Casanova, Roger Le Grand, Olivier Hermine, Pierre-Louis Tharaux, Xavier Mariette

Front Immunol. 2023; 14: 1250214. Published online 2023 Nov 21. doi: 10.3389/fimmu.2023.1250214

PMCID:: PMC10703045

Abstract Article PDF–1.7M

Select item 97339622.

NFKB2 haploinsufficiency identified via screening for IFN-α2 autoantibodies in children and adolescents hospitalized with SARS-CoV-2–related complications

Aaron Bodansky, Sara E. Vazquez, Janet Chou, Tanya Novak, Amer Al-Musa, Cameron Young, Margaret Newhams, Suden Kucukak, Laura D. Zambrano, Anthea Mitchell, Chung-Yu Wang, Kristin Moffitt, Natasha B. Halasa, Laura L. Loftis, Stephanie P. Schwartz, Tracie C. Walker, Elizabeth H. Mack, Julie C. Fitzgerald, Shira J. Gertz, Courtney M. Rowan, Katherine Irby, Ronald C. Sanders, Jr., Michele Kong, Jennifer E. Schuster, Mary A. Staat, Matt S. Zinter, Natalie Z. Cvijanovich, Keiko M. Tarquinio, Bria M. Coates, Heidi R. Flori, Mary K. Dahmer, Hillary Crandall, Melissa L. Cullimore, Emily R. Levy, Brandon Chatani, Ryan Nofziger, Overcoming COVID-19 Network Study Group Investigators,, Raif S. Geha, Joseph DeRisi, Angela P. Campbell, Mark Anderson, Adrienne G. Randolph

J Allergy Clin Immunol. 2023 Apr; 151(4): 926–930.e2. Published online 2022 Dec 9. doi: 10.1016/j.jaci.2022.11.020

PMCID:: PMC9733962

Abstract Article PDF–638K

Select item 81917423.

Comprehensive proteomic characterization of stem cell-derived extracellular matrices

Héloïse Ragelle, Alexandra Naba, Benjamin L. Larson, Fangheng Zhou, Miralem Prijic, Charles A. Whittaker, Amanda Del Rosario, Robert Langer, Richard O. Hynes, Daniel G. Anderson

Biomaterials. Author manuscript; available in PMC 2021 Jun 10.

Published in final edited form as: Biomaterials. 2017 Jun; 128: 147–159. Published online 2017 Mar 7. doi: 10.1016/j.biomaterials.2017.03.008

PMCID:: PMC8191742

Abstract Article PDF–1.5M

Select item 81650304.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 80787285.

Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics

Alexandra Naba, Oliver M. T. Pearce, Amanda Del Rosario, Duanduan Ma, Huiming Ding, Vinothini Rajeeve, Pedro R. Cutillas, Frances R. Balkwill, Richard O. Hynes

J Proteome Res. Author manuscript; available in PMC 2021 Apr 27.

Published in final edited form as: J Proteome Res. 2017 Aug 4; 16(8): 3083–3091. Published online 2017 Jul 19. doi: 10.1021/acs.jproteome.7b00191

PMCID:: PMC8078728

Abstract Article PDF–2.1M

Select item 78976826.

Comparative Cell Surface Proteomic Analysis of the Primary Human T Cell and Monocyte Responses to Type I Interferon

Lior Soday, Martin Potts, Leah M. Hunter, Benjamin J. Ravenhill, Jack W. Houghton, James C. Williamson, Robin Antrobus, Mark R. Wills, Nicholas J. Matheson, Michael P. Weekes

Front Immunol. 2021; 12: 600056. Published online 2021 Feb 8. doi: 10.3389/fimmu.2021.600056

PMCID:: PMC7897682

Abstract Article PDF–1.7M

Select item 75212587.

Collagen Type III Alpha 1 chain regulated by GATA‐Binding Protein 6 affects Type II IFN response and propanoate metabolism in the recurrence of lower grade glioma

Runzhi Huang, Zhenyu Li, Xiaolong Zhu, Penghui Yan, Dianwen Song, Huabin Yin, Peng Hu, Ruoyi Lin, Shengyu Wu, Tong Meng, Jie Zhang, Zongqiang Huang

J Cell Mol Med. 2020 Sep; 24(18): 10803–10815. Published online 2020 Aug 5. doi: 10.1111/jcmm.15705

PMCID:: PMC7521258

Abstract Article PDF–2.9M

Select item 74026328.

Impaired type I interferon activity and inflammatory responses in severe COVID-19 patients

Jérôme Hadjadj, Nader Yatim, Laura Barnabei, Aurélien Corneau, Jeremy Boussier, Nikaïa Smith, Hélène Péré, Bruno Charbit, Vincent Bondet, Camille Chenevier-Gobeaux, Paul Breillat, Nicolas Carlier, Rémy Gauzit, Caroline Morbieu, Frédéric Pène, Nathalie Marin, Nicolas Roche, Tali-Anne Szwebel, Sarah H. Merkling, Jean-Marc Treluyer, David Veyer, Luc Mouthon, Catherine Blanc, Pierre-Louis Tharaux, Flore Rozenberg, Alain Fischer, Darragh Duffy, Frédéric Rieux-Laucat, Solen Kernéis, Benjamin Terrier

Science. 2020 Aug 7; 369(6504): 718–724. Published online 2020 Jul 13. doi: 10.1126/science.abc6027

PMCID:: PMC7402632

Abstract Article PDF–2.4M

Select item 72046699.

COVID-19: Pathogenesis, cytokine storm and therapeutic potential of interferons

Shivraj Hariram Nile, Arti Nile, Jiayin Qiu, Lin Li, Xu Jia, Guoyin Kai

Cytokine Growth Factor Rev. 2020 Jun; 53: 66–70. Published online 2020 May 7. doi: 10.1016/j.cytogfr.2020.05.002

PMCID:: PMC7204669

Abstract Article PDF–3.5M

Select item 716998310.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 674155111.

HIV-1 Gag-Virus-Like Particles Inhibit HIV-1 Replication in Dendritic Cells and T Cells through IFN-α-Dependent Upregulation of APOBEC3G and 3F

Myint Oo Chang, Tomoyuki Suzuki, Norio Yamamoto, Megumi Watanabe, Hiroshi Takaku

J Innate Immun. 2012 Aug; 4(5-6): 579–590. Published online 2012 Jun 26. doi: 10.1159/000339402

PMCID:: PMC6741551

Abstract Article PDF–1.1M

Select item 655402412.

Decoding type I and III interferon signalling during viral infection

Emily V. Mesev, Robert A. LeDesma, Alexander Ploss

Nat Microbiol. 2019; 4(6): 914–924. Published online 2019 Apr 1. doi: 10.1038/s41564-019-0421-x

PMCID:: PMC6554024

Abstract Article PDF–1.4M

Select item 631720813.

Interferon-alpha 2 but not Interferon-gamma serum levels are associated with intramuscular fat in obese patients with nonalcoholic fatty liver disease

Giovanni Tarantino, Susan Costantini, Vincenzo Citro, Paolo Conforti, Francesca Capone, Angela Sorice, Domenico Capone

J Transl Med. 2019; 17: 8. Published online 2019 Jan 3. doi: 10.1186/s12967-018-1754-6

PMCID:: PMC6317208

Abstract Article PDF–1.0M

Select item 616668214.

Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei

Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck

Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924

PMCID:: PMC6166682

Abstract Article PDF–3.8M

Select item 581844315.

Interferon α2 and interferon γ induce the degranulation independent production of VEGF‐A and IL‐1 receptor antagonist and other mediators from human mast cells

Sharon A. Oldford, Suzanne P. Salsman, Liliana Portales‐Cervantes, Raidan Alyazidi, Robert Anderson, Ian D Haidl, Jean S. Marshall

Immun Inflamm Dis. 2018 Mar; 6(1): 176–189. Published online 2017 Dec 13. doi: 10.1002/iid3.211

PMCID:: PMC5818443

Abstract Article PDF–1.1M

Select item 576383516.

CD73-Dependent Regulation of Interferon AlphaA and Interleukin-10 in the Inflamed Mucosa

Ilya Sotnikov, Nancy A. Louis

ScientificWorldJournal. 2010; 10: 2167–2180. Published online 2010 Nov 4. doi: 10.1100/tsw.2010.203

PMCID:: PMC5763835

Abstract PDF–739K

Select item 562928917.

IFNA2: The prototypic human alpha interferon

Franciane Paul, Sandra Pellegrini, Gilles Uzé

Gene. Author manuscript; available in PMC 2017 Oct 6.

Published in final edited form as: Gene. 2015 Aug 10; 567(2): 132–137. Published online 2015 May 14. doi: 10.1016/j.gene.2015.04.087

PMCID:: PMC5629289

Abstract Article PDF–989K

Select item 553660818.

Interferon-α-induced CD100 on naïve CD8⁺ T cells enhances antiviral responses to hepatitis C infection through CD72 signal transduction

Bing Jie Li, Yu He, Ying Zhang, Yong Hong Guo, Yun Zhou, Pei Xin Zhang, Wei Wang, Jie Ru Zhao, Jin Ge Li, Wei Ze Zuo, Chao Fan, Zhan Sheng Jia

J Int Med Res. 2017 Feb; 45(1): 89–100. Published online 2017 Jan 12. doi: 10.1177/0300060516676136

PMCID:: PMC5536608

Abstract Article PDF–462K

Select item 553161119.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 515022320.

Spatiotemporal control of interferon-induced JAK/STAT signalling and gene transcription by the retromer complex

Daniela Chmiest, Nanaocha Sharma, Natacha Zanin, Christine Viaris de Lesegno, Massiullah Shafaq-Zadah, Vonick Sibut, Florent Dingli, Philippe Hupé, Stephan Wilmes, Jacob Piehler, Damarys Loew, Ludger Johannes, Gideon Schreiber, Christophe Lamaze

Nat Commun. 2016; 7: 13476. Published online 2016 Dec 5. doi: 10.1038/ncomms13476

PMCID:: PMC5150223

Abstract Article PDF–2.9M

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