PMC Links for GEO Profiles (Select 112462964) - PMC

Result Filters

Links from GEO Profiles

Items: 1 to 20 of 118

<< First< Prev

Page of 6

Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 108418422.

Single-molecule quantitation of RNA-binding protein occupancy and stoichiometry defines a role for Yra1 (Aly/REF) in nuclear mRNP organization

Ryuta Asada, Andrew Dominguez, Ben Montpetit

Cell Rep. Author manuscript; available in PMC 2024 Feb 5.

Published in final edited form as: Cell Rep. 2023 Nov 28; 42(11): 113415. Published online 2023 Nov 14. doi: 10.1016/j.celrep.2023.113415

PMCID:: PMC10841842

Abstract Article PDF–3.9M

Select item 107988583.

Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking

Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan

J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047

PMCID:: PMC10798858

Abstract Article PDF–6.4M

Select item 107261624.

Tho2 is critical for the recruitment of Rrp6 to chromatin in response to perturbed mRNP biogenesis

Valentin Beauvais, Kévin Moreau, Bojan Žunar, Nadège Hervouet-Coste, Ana Novačić, Aurélia Le Dantec, Michael Primig, Christine Mosrin-Huaman, Igor Stuparević, A. Rachid Rahmouni

RNA. 2024 Jan; 30(1): 89–98. doi: 10.1261/rna.079707.123

PMCID:: PMC10726162

Abstract Article PDF–3.8M

Select item 107001385.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 106533886.

Cross-linking mass spectrometric analysis of the endogenous TREX complex from Saccharomyces cerevisiae

Carina Kern, Christin Radon, Wolfgang Wende, Alexander Leitner, Katja Sträßer

RNA. 2023 Dec; 29(12): 1870–1880. doi: 10.1261/rna.079758.123

PMCID:: PMC10653388

Abstract Article PDF–13M

Select item 105166427.

ISW1a modulates cohesin distribution in centromeric and pericentromeric regions

Ireneusz Litwin, Małgorzata Nowicka, Katarzyna Markowska, Ewa Maciaszczyk-Dziubińska, Paulina Tomaszewska, Robert Wysocki, Karol Kramarz

Nucleic Acids Res. 2023 Sep 22; 51(17): 9101–9121. Published online 2023 Jul 24. doi: 10.1093/nar/gkad612

PMCID:: PMC10516642

Abstract Article PDF–2.8M

Select item 103931948.

Nuclear mRNPs are compact particles packaged with a network of proteins promoting RNA–RNA interactions

Fabien Bonneau, Jérôme Basquin, Barbara Steigenberger, Tillman Schäfer, Ingmar B. Schäfer, Elena Conti

Genes Dev. 2023 Jun 1; 37(11-12): 505–517. doi: 10.1101/gad.350630.123

PMCID:: PMC10393194

Abstract Article PDF–6.1M

Select item 102350869.

Rio1 downregulates centromeric RNA levels to promote the timely assembly of structurally fit kinetochores

Ksenia Smurova, Michela Damizia, Carmela Irene, Stefania Stancari, Giovanna Berto, Giulia Perticari, Maria Giuseppina Iacovella, Ilaria D’Ambrosio, Maria Giubettini, Réginald Philippe, Chiara Baggio, Elisabetta Callegaro, Andrea Casagranda, Alessandro Corsini, Vincenzo Gentile Polese, Anna Ricci, Erik Dassi, Peter De Wulf

Nat Commun. 2023; 14: 3172. Published online 2023 Jun 1. doi: 10.1038/s41467-023-38920-9

PMCID:: PMC10235086

Abstract Article PDF–2.6M

Select item 943429610.

A role for the Saccharomyces cerevisiae Rtt109 histone acetyltransferase in R-loop homeostasis and associated genome instability

Juan Carlos Cañas, María Luisa García-Rubio, Alicia García, Francisco Antequera, Belén Gómez-González, Andrés Aguilera

Genetics. 2022 Sep; 222(1): iyac108. Published online 2022 Jul 22. doi: 10.1093/genetics/iyac108

PMCID:: PMC9434296

Abstract Article PDF–1.7M

Select item 920981111.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 851195012.

The histone chaperone Spt6 is required for normal recruitment of the capping enzyme Abd1 to transcribed regions

Rajaraman Gopalakrishnan, Fred Winston

J Biol Chem. 2021 Oct; 297(4): 101205. Published online 2021 Sep 17. doi: 10.1016/j.jbc.2021.101205

PMCID:: PMC8511950

Abstract Article PDF–3.1M

Select item 849296113.

Spt4 facilitates the movement of RNA polymerase II through the +2 nucleosomal barrier

Ülkü Uzun, Thomas Brown, Harry Fischl, Andrew Angel, Jane Mellor

Cell Rep. 2021 Sep 28; 36(13): 109755. Published online 2021 Sep 29. doi: 10.1016/j.celrep.2021.109755

PMCID:: PMC8492961

Abstract Article

Select item 829842414.

Harmful R-loops are prevented via different cell cycle-specific mechanisms

Marta San Martin-Alonso, María E. Soler-Oliva, María García-Rubio, Tatiana García-Muse, Andrés Aguilera

Nat Commun. 2021; 12: 4451. Published online 2021 Jul 22. doi: 10.1038/s41467-021-24737-x

PMCID:: PMC8298424

Abstract Article PDF–2.2M

Select item 828940815.

DNA-RNA hybrids at DSBs interfere with repair by homologous recombination

Pedro Ortega, José Antonio Mérida-Cerro, Ana G Rondón, Belén Gómez-González, Andrés Aguilera

eLife. 2021; 10: e69881. Published online 2021 Jul 8. doi: 10.7554/eLife.69881

PMCID:: PMC8289408

Abstract Article PDF–4.6M

Select item 809882116.

R-loops at centromeric chromatin contribute to defects in kinetochore integrity and chromosomal instability in budding yeast

Prashant K. Mishra, Arijita Chakraborty, Elaine Yeh, Wenyi Feng, Kerry S. Bloom, Munira A. Basrai

Mol Biol Cell. 2021 Jan 1; 32(1): 74–89. doi: 10.1091/mbc.E20-06-0379

PMCID:: PMC8098821

Abstract Article PDF–6.9M

Select item 804374717.

Cryo-EM structure of the yeast TREX complex and coordination with the SR-like protein Gbp2

Yihu Xie, Bradley P Clarke, Yong Joon Kim, Austin L Ivey, Pate S Hill, Yi Shi, Yi Ren

eLife. 2021; 10: e65699. Published online 2021 Mar 31. doi: 10.7554/eLife.65699

PMCID:: PMC8043747

Abstract Article PDF–3.7M

Select item 775888018.

Purified Smc5/6 Complex Exhibits DNA Substrate Recognition and Compaction

Pilar Gutierrez-Escribano, Silvia Hormeño, Julene Madariaga-Marcos, Roger Solé-Soler, Francis J. O’Reilly, Kyle Morris, Clara Aicart-Ramos, Ricardo Aramayo, Alex Montoya, Holger Kramer, Juri Rappsilber, Jordi Torres-Rosell, Fernando Moreno-Herrero, Luis Aragon

Mol Cell. 2020 Dec 17; 80(6): 1039–1054.e6. doi: 10.1016/j.molcel.2020.11.012