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Select item 111520761.

Sse1, Hsp110 chaperone of yeast, controls the cellular fate during endoplasmic reticulum stress

Mainak Pratim Jha, Vignesh Kumar, Asmita Ghosh, Koyeli Mapa

G3 (Bethesda) 2024 Jun; 14(6): jkae075. Published online 2024 Apr 5. doi: 10.1093/g3journal/jkae075

PMCID:: PMC11152076

Abstract Article PDF–4.0M

Select item 111052982.

Cellular responses to proteostasis perturbations reveal non-optimal feedback in chaperone networks

Asmita Ghosh, Abhilash Gangadharan, Monika Verma, Sarada Das, Latika Matai, Devi Prasanna Dash, Debasis Dash, Koyeli Mapa, Kausik Chakraborty

Cell Mol Life Sci. 2019 Apr; 76(8): 1605–1621. Published online 2019 Jan 25. doi: 10.1007/s00018-019-03013-8

PMCID:: PMC11105298

Abstract Article PDF–2.8M

Select item 108724773.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001384.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 96309865.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 93718926.

mRNA- and factor-driven dynamic variability controls eIF4F-cap recognition for translation initiation

Burak Çetin, Seán E O’Leary

Nucleic Acids Res. 2022 Aug 12; 50(14): 8240–8261. Published online 2022 Jul 25. doi: 10.1093/nar/gkac631

PMCID:: PMC9371892

Abstract Article PDF–5.7M

Select item 92860237.

Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton

Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019

PMCID:: PMC9286023

Abstract Article

Select item 92098118.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 79271869.

Direct involvement of Hsp70 ATP hydrolysis in Ubr1-dependent quality control

Amanjot Singh, Nidhi Vashistha, Jarrod Heck, Xin Tang, Peter Wipf, Jeffrey L. Brodsky, Randolph Y. Hampton

Mol Biol Cell. 2020 Nov 15; 31(24): 2669–2686. doi: 10.1091/mbc.E20-08-0541

PMCID:: PMC7927186

Abstract Article PDF–2.2M

Select item 733015110.

Synthetic dosage lethal (SDL) interaction data of Hmt1 arginine methyltransferase

Dimitris Kyriakou, Mamantia Constantinou, Antonis Kirmizis

Data Brief. 2020 Aug; 31: 105885. Published online 2020 Jun 21. doi: 10.1016/j.dib.2020.105885

PMCID:: PMC7330151

Abstract Article PDF–968K

Select item 629136611.

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide

Metallomics. Author manuscript; available in PMC 2019 Dec 12.

Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j

PMCID:: PMC6291366

Abstract Article PDF–3.0M

Select item 592252812.

Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs

Harley O’Connor Mount, Nicole M. Revie, Robert T. Todd, Kaitlin Anstett, Cathy Collins, Michael Costanzo, Charles Boone, Nicole Robbins, Anna Selmecki, Leah E. Cowen

PLoS Genet. 2018 Apr; 14(4): e1007319. Published online 2018 Apr 27. doi: 10.1371/journal.pgen.1007319

PMCID:: PMC5922528

Abstract Article PDF–7.1M

Select item 569178613.

The sensitivity of the yeast, Saccharomyces cerevisiae, to acetic acid is influenced by DOM34 and RPL36A

Bahram Samanfar, Kristina Shostak, Houman Moteshareie, Maryam Hajikarimlou, Sarah Shaikho, Katayoun Omidi, Mohsen Hooshyar, Daniel Burnside, Imelda Galván Márquez, Tom Kazmirchuk, Thet Naing, Paula Ludovico, Anna York-Lyon, Kama Szereszewski, Cindy Leung, Jennifer Yixin Jin, Rami Megarbane, Myron L. Smith, Mohan Babu, Martin Holcik, Ashkan Golshani

PeerJ. 2017; 5: e4037. Published online 2017 Nov 14. doi: 10.7717/peerj.4037

PMCID:: PMC5691786

Abstract Article PDF–1.0M

Select item 566188514.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 564803215.

Architecture and dynamics of overlapped RNA regulatory networks

Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens

RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117

PMCID:: PMC5648032

Abstract Article PDF–6.6M

Select item 559580816.

Interrogation of γ-tubulin alleles using high-resolution fitness measurements reveals a distinct cytoplasmic function in spindle alignment

Kristian Shulist, Eric Yen, Susanne Kaitna, Allen Leary, Alexandra Decterov, Debarun Gupta, Jackie Vogel

Sci Rep. 2017; 7: 11398. Published online 2017 Sep 12. doi: 10.1038/s41598-017-11789-7

Correction in:: Sci Rep. 2018; 8: 2513.

PMCID:: PMC5595808

Abstract Article PDF–5.9M

Select item 547377017.

Evolutionary Conservation and Emerging Functional Diversity of the Cytosolic Hsp70:J Protein Chaperone Network of Arabidopsis thaliana

Amit K. Verma, Danish Diwan, Sandeep Raut, Neha Dobriyal, Rebecca E. Brown, Vinita Gowda, Justin K. Hines, Chandan Sahi

G3 (Bethesda) 2017 Jun; 7(6): 1941–1954. Published online 2017 Apr 21. doi: 10.1534/g3.117.042291

PMCID:: PMC5473770

Abstract Article PDF–2.0M

Select item 514238018.

Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae

Dimitris Kyriakou, Emmanouil Stavrou, Panayiota Demosthenous, Georgia Angelidou, Bryan-Joseph San Luis, Charles Boone, Vasilis J. Promponas, Antonis Kirmizis

BMC Biol. 2016; 14: 106. Published online 2016 Dec 7. doi: 10.1186/s12915-016-0325-7

PMCID:: PMC5142380

Abstract Article PDF–1.2M

Select item 509701219.

Dual interaction of the Hsp70 J protein co-chaperone Zuotin with the 40S and 60S subunits of the ribosome

Kanghyun Lee, Ruchika Sharma, Om Kumar Shrestha, Craig A. Bingman, Elizabeth A. Craig

Nat Struct Mol Biol. Author manuscript; available in PMC 2017 Mar 26.

Published in final edited form as: Nat Struct Mol Biol. 2016 Nov; 23(11): 1003–1010. Published online 2016 Sep 26. doi: 10.1038/nsmb.3299

PMCID:: PMC5097012

Abstract Article PDF–1.4M

Select item 508651920.

Combined Action of Histone Reader Modules Regulates NuA4 Local Acetyltransferase Function but Not Its Recruitment on the Genome

Anne-Lise Steunou, Myriam Cramet, Dorine Rossetto, Maria J. Aristizabal, Nicolas Lacoste, Simon Drouin, Valérie Côté, Eric Paquet, Rhea T. Utley, Nevan Krogan, François Robert, Michael S. Kobor, Jacques Côté

Mol Cell Biol. 2016 Nov 15; 36(22): 2768–2781. Prepublished online 2016 Aug 22. Published online 2016 Oct 28. doi: 10.1128/MCB.00112-16

PMCID:: PMC5086519

Abstract Article PDF–2.3M

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