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Items: 20

1.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
2.
Bi-allelic JAM2 Variants Lead to Early-Onset Recessive Primary Familial Brain Calcification
Lucia V. Schottlaender, Rosella Abeti, Zane Jaunmuktane, Carol Macmillan, Viorica Chelban, Benjamin O’Callaghan, John McKinley, Reza Maroofian, Stephanie Efthymiou, Alkyoni Athanasiou-Fragkouli, Raeburn Forbes, Marc P.M. Soutar, John H. Livingston, Bernardett Kalmar, Orlando Swayne, Gary Hotton, SYNAPS Study Group, Alan Pittman, João Ricardo Mendes de Oliveira, Maria de Grandis, Angela Richard-Loendt, Francesca Launchbury, Juri Althonayan, Gavin McDonnell, Aisling Carr, Suliman Khan, Christian Beetz, Atil Bisgin, Sevcan Tug Bozdogan, Amber Begtrup, Erin Torti, Linda Greensmith, Paola Giunti, Patrick J. Morrison, Sebastian Brandner, Michel Aurrand-Lions, Henry Houlden
Am J Hum Genet. 2020 Mar 5; 106(3): 412–421. Published online 2020 Mar 5. doi: 10.1016/j.ajhg.2020.02.007
PMCID:
PMC7058839
AbstractArticlePDF–3.0M
3.
Blood-Brain Barrier: From Physiology to Disease and Back
Melanie D. Sweeney, Zhen Zhao, Axel Montagne, Amy R. Nelson, Berislav V. Zlokovic
Physiol Rev. 2019 Jan 1; 99(1): 21–78. Published online 2018 Oct 3. doi: 10.1152/physrev.00050.2017
PMCID:
PMC6335099
AbstractArticle
4.
HIV-1 gp120 Glycoprotein Interacting with Dendritic Cell-specific Intercellular Adhesion Molecule 3-grabbing Non-integrin (DC-SIGN) Down-Regulates Tight Junction Proteins to Disrupt the Blood Retinal Barrier and Increase Its Permeability
Yi-Wen Qian, Chuan Li, Ai-Ping Jiang, Shengfang Ge, Ping Gu, Xianqun Fan, Tai-Sheng Li, Xia Jin, Jian-Hua Wang, Zhi-Liang Wang
J Biol Chem. 2016 Oct 28; 291(44): 22977–22987. Published online 2016 Sep 7. doi: 10.1074/jbc.M116.744615
PMCID:
PMC5087719
AbstractArticlePDF–3.6M
5.
The role of JAM-B in cancer and cancer metastasis (Review)
HUISHAN ZHAO, HEFEN YU, TRACEY A. MARTIN, XU TENG, WEN G. JIANG
Oncol Rep. 2016 Jul; 36(1): 3–9. Published online 2016 Apr 27. doi: 10.3892/or.2016.4773
PMCID:
PMC4899009
AbstractArticlePDF–495K
6.
Effect of junctional adhesion molecule-2 expression on cell growth, invasion and migration in human colorectal cancer
HUISHAN ZHAO, HEFEN YU, TRACEY A. MARTIN, YUXIANG ZHANG, GANG CHEN, WEN G. JIANG
Int J Oncol. 2016 Mar; 48(3): 929–936. Published online 2016 Jan 15. doi: 10.3892/ijo.2016.3340
PMCID:
PMC4750534
AbstractArticlePDF–758K
7.
Toward an understanding of the protein interaction network of the human liver
Jian Wang, Keke Huo, Lixin Ma, Liujun Tang, Dong Li, Xiaobi Huang, Yanzhi Yuan, Chunhua Li, Wei Wang, Wei Guan, Hui Chen, Chaozhi Jin, Junchen Wei, Wanqiao Zhang, Yongsheng Yang, Qiongming Liu, Ying Zhou, Cuili Zhang, Zhihao Wu, Wangxiang Xu, Ying Zhang, Tao Liu, Donghui Yu, Yaping Zhang, Liang Chen, Dewu Zhu, Xing Zhong, Lixin Kang, Xiang Gan, Xiaolan Yu, Qi Ma, Jing Yan, Li Zhou, Zhongyang Liu, Yunping Zhu, Tao Zhou, Fuchu He, Xiaoming Yang
Mol Syst Biol. 2011; 7: 536. Published online 2011 Oct 11. doi: 10.1038/msb.2011.67
Correction in:
Mol Syst Biol. 2017 Dec; 13(12): 965.
PMCID:
PMC3261708
AbstractArticlePDF–2.0M
8.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
9.
Methamphetamine alters blood brain barrier permeability via the modulation of tight junction expression: Implication for HIV-1 neuropathogenesis in the context of drug abuse
Supriya D. Mahajan, Ravikumar Aalinkeel, Donald E. Sykes, Jessica L. Reynolds, B. Bindukumar, Adaffaras Adal, Mingshen Qi, Jennifer Toh, Gaixia Xu, Paras N. Prasad, Stanley A. Schwartz
Brain Res. Author manuscript; available in PMC 2010 Feb 22.
Published in final edited form as: Brain Res. 2008 Apr 8; 1203: 133–148. Published online 2008 Feb 13. doi: 10.1016/j.brainres.2008.01.093
PMCID:
PMC2826119
AbstractArticlePDF–2.2M
10.
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB
Anna C. Need, Deborah K. Attix, Jill M. McEvoy, Elizabeth T. Cirulli, Kristen L. Linney, Priscilla Hunt, Dongliang Ge, Erin L. Heinzen, Jessica M. Maia, Kevin V. Shianna, Michael E. Weale, Lynn F. Cherkas, Gail Clement, Tim D. Spector, Greg Gibson, David B. Goldstein
Hum Mol Genet. 2009 Dec 1; 18(23): 4650–4661. Published online 2009 Sep 4. doi: 10.1093/hmg/ddp413
PMCID:
PMC2773267
AbstractArticlePDF–151K
11.
Junctional adhesion molecule (JAM)-B supports lymphocyte rolling and adhesion through interaction with α4β1 integrin
Ralf J Ludwig, Katja Hardt, Max Hatting, Roxana Bistrian, Sandra Diehl, Heinfried H Radeke, Maurizio Podda, Michael P Schön, Roland Kaufmann, Reinhard Henschler, Josef M Pfeilschifter, Sentot Santoso, Wolf-Henning Boehncke
Immunology. 2009 Oct; 128(2): 196–205. doi: 10.1111/j.1365-2567.2009.03100.x
PMCID:
PMC2767309
AbstractArticlePDF–359K
12.
Signal peptide prediction based on analysis of experimentally verified cleavage sites
Zemin Zhang, William J. Henzel
Protein Sci. 2004 Oct; 13(10): 2819–2824. doi: 10.1110/ps.04682504
PMCID:
PMC2286551
AbstractArticlePDF–125K
13.
Human Plasma N-Glycoproteome Analysis by Immunoaffinity Subtraction, Hydrazide Chemistry, and Mass Spectrometry
Tao Liu, Wei-Jun Qian, Marina A. Gritsenko, David G. Camp, II, Matthew E. Monroe, Ronald J. Moore, Richard D. Smith
J Proteome Res. Author manuscript; available in PMC 2007 Apr 10.
Published in final edited form as: J Proteome Res. 2005; 4(6): 2070–2080. doi: 10.1021/pr0502065
PMCID:
PMC1850943
AbstractArticlePDF–626K
14.
A distinct PAR complex associates physically with VE-cadherin in vertebrate endothelial cells
Sandra Iden, Daniela Rehder, Benjamin August, Atsushi Suzuki, Karen Wolburg-Buchholz, Hartwig Wolburg, Shigeo Ohno, Jürgen Behrens, Dietmar Vestweber, Klaus Ebnet
EMBO Rep. 2006 Dec; 7(12): 1239–1246. Published online 2006 Oct 20. doi: 10.1038/sj.embor.7400819
PMCID:
PMC1794700
AbstractArticlePDF–387K
15.
The LIFEdb database in 2006
Alexander Mehrle, Heiko Rosenfelder, Ingo Schupp, Coral del Val, Dorit Arlt, Florian Hahne, Stephanie Bechtel, Jeremy Simpson, Oliver Hofmann, Winston Hide, Karl-Heinz Glatting, Wolfgang Huber, Rainer Pepperkok, Annemarie Poustka, Stefan Wiemann
Nucleic Acids Res. 2006 Jan 1; 34(Database issue): D415–D418. Published online 2005 Dec 28. doi: 10.1093/nar/gkj139
PMCID:
PMC1347501
AbstractArticlePDF–301K
16.
From ORFeome to Biology: A Functional Genomics Pipeline
Stefan Wiemann, Dorit Arlt, Wolfgang Huber, Ruth Wellenreuther, Simone Schleeger, Alexander Mehrle, Stephanie Bechtel, Mamatha Sauermann, Ulrike Korf, Rainer Pepperkok, Holger Sültmann, Annemarie Poustka
Genome Res. 2004 Oct; 14(10b): 2136–2144. doi: 10.1101/gr.2576704
PMCID:
PMC528930
AbstractArticlePDF–459K
17.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
18.
The Secreted Protein Discovery Initiative (SPDI), a Large-Scale Effort to Identify Novel Human Secreted and Transmembrane Proteins: A Bioinformatics Assessment
Hilary F. Clark, Austin L. Gurney, Evangeline Abaya, Kevin Baker, Daryl Baldwin, Jennifer Brush, Jian Chen, Bernard Chow, Clarissa Chui, Craig Crowley, Bridget Currell, Bethanne Deuel, Patrick Dowd, Dan Eaton, Jessica Foster, Christopher Grimaldi, Qimin Gu, Philip E. Hass, Sherry Heldens, Arthur Huang, Hok Seon Kim, Laura Klimowski, Yisheng Jin, Stephanie Johnson, James Lee, Lhney Lewis, Dongzhou Liao, Melanie Mark, Edward Robbie, Celina Sanchez, Jill Schoenfeld, Somasekar Seshagiri, Laura Simmons, Jennifer Singh, Victoria Smith, Jeremy Stinson, Alicia Vagts, Richard Vandlen, Colin Watanabe, David Wieand, Kathryn Woods, Ming-Hong Xie, Daniel Yansura, Sothy Yi, Guoying Yu, Jean Yuan, Min Zhang, Zemin Zhang, Audrey Goddard, William I. Wood, Paul Godowski
Genome Res. 2003 Oct; 13(10): 2265–2270. doi: 10.1101/gr.1293003
Correction in:
Genome Res. 2003 Dec; 13(12): 2759.
PMCID:
PMC403697
AbstractArticlePDF–120K
19.
DNA Cloning Using In Vitro Site-Specific Recombination
James L. Hartley, Gary F. Temple, Michael A. Brasch
Genome Res. 2000 Nov; 10(11): 1788–1795. doi: 10.1101/gr.143000
PMCID:
PMC310948
AbstractArticlePDF–1.7M
20.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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