PMC Links for GEO Profiles (Select 123005660) - PMC

Select item 81650301.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 55316112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 50221633.

Molecular Pap smear: HPV genotype and DNA methylation of ADCY8, CDH8, and ZNF582 as an integrated biomarker for high-grade cervical cytology

Jane Shen-Gunther, Chiou-Miin Wang, Graham M. Poage, Chun-Lin Lin, Luis Perez, Nancy A. Banks, Tim Hui-Ming Huang

Clin Epigenetics. 2016; 8(1): 96. Published online 2016 Sep 13. doi: 10.1186/s13148-016-0263-9

PMCID:: PMC5022163

Abstract Article PDF–2.2M

Select item 38414554.

Prenatal Ethanol Exposure Disrupts Intraneocortical Circuitry, Cortical Gene Expression, and Behavior in a Mouse Model of FASD

Hani El Shawa, Charles W. Abbott, III, Kelly J. Huffman

J Neurosci. 2013 Nov 27; 33(48): 18893–18905. doi: 10.1523/JNEUROSCI.3721-13.2013

PMCID:: PMC3841455

Abstract Article PDF–3.4M

Select item 37340995.

Identification of candidate intergenic risk loci in autism spectrum disorder

Susan Walker, Stephen W Scherer

BMC Genomics. 2013; 14: 499. Published online 2013 Jul 24. doi: 10.1186/1471-2164-14-499

PMCID:: PMC3734099

Abstract Article PDF–245K

Select item 36909726.

An eQTL mapping approach reveals that rare variants in the SEMA5A regulatory network impact autism risk

Ye Cheng, Jeffrey Francis Quinn, Lauren Anne Weiss

Hum Mol Genet. 2013 Jul 15; 22(14): 2960–2972. Published online 2013 Apr 10. doi: 10.1093/hmg/ddt150

PMCID:: PMC3690972

Abstract Article PDF–516K

Select item 35914057.

Pemphigus Vulgaris Autoantibody Profiling by Proteomic Technique

Mina Kalantari-Dehaghi, Grant J. Anhalt, Michael J. Camilleri, Alex I. Chernyavsky, Sookhee Chun, Philip L. Felgner, Algis Jasinskas, Kristin M. Leiferman, Li Liang, Steve Marchenko, Rie Nakajima-Sasaki, Mark R. Pittelkow, John J. Zone, Sergei A. Grando

PLoS One. 2013; 8(3): e57587. Published online 2013 Mar 7. doi: 10.1371/journal.pone.0057587

PMCID:: PMC3591405

Abstract Article PDF–669K

Select item 32964868.

Genome-wide association and linkage identify modifier loci of lung disease severity in cystic fibrosis at 11p13 and 20q13.2

Fred A. Wright, Lisa J. Strug, Vishal K. Doshi, Clayton W. Commander, Scott M. Blackman, Lei Sun, Yves Berthiaume, David Cutler, Andreea Cojocaru, J. Michael Collaco, Mary Corey, Ruslan Dorfman, Katrina Goddard, Deanna Green, Jack W. Kent, Jr, Ethan M. Lange, Seunggeun Lee, Weili Li, Jingchun Luo, Gregory M. Mayhew, Kathleen M. Naughton, Rhonda G. Pace, Peter Paré, Johanna M. Rommens, Andrew Sandford, Jaclyn R. Stonebraker, Wei Sun, Chelsea Taylor, Lori L. Vanscoy, Fei Zou, John Blangero, Julian Zielenski, Wanda K. O’Neal, Mitchell L. Drumm, Peter R. Durie, Michael R. Knowles, Garry R. Cutting

Nat Genet. Author manuscript; available in PMC 2012 Mar 7.

Published in final edited form as: Nat Genet. 2011 Jun; 43(6): 539–546. Published online 2011 May 22. doi: 10.1038/ng.838

PMCID:: PMC3296486

Abstract Article PDF–1.1M

Select item 32809689.

Genome-Wide Association Study Identifies Novel Loci Associated with Circulating Phospho- and Sphingolipid Concentrations

Ayşe Demirkan, Cornelia M. van Duijn, Peter Ugocsai, Aaron Isaacs, Peter P. Pramstaller, Gerhard Liebisch, James F. Wilson, Åsa Johansson, Igor Rudan, Yurii S. Aulchenko, Anatoly V. Kirichenko, A. Cecile J. W. Janssens, Ritsert C. Jansen, Carsten Gnewuch, Francisco S. Domingues, Cristian Pattaro, Sarah H. Wild, Inger Jonasson, Ozren Polasek, Irina V. Zorkoltseva, Albert Hofman, Lennart C. Karssen, Maksim Struchalin, James Floyd, Wilmar Igl, Zrinka Biloglav, Linda Broer, Arne Pfeufer, Irene Pichler, Susan Campbell, Ghazal Zaboli, Ivana Kolcic, Fernando Rivadeneira, Jennifer Huffman, Nicholas D. Hastie, Andre Uitterlinden, Lude Franke, Christopher S. Franklin, Veronique Vitart, DIAGRAM Consortium, Christopher P. Nelson, Michael Preuss, CARDIoGRAM Consortium, Joshua C. Bis, Christopher J. O'Donnell, Nora Franceschini, CHARGE Consortium, Jacqueline C. M. Witteman, Tatiana Axenovich, Ben A. Oostra, Thomas Meitinger, Andrew A. Hicks, Caroline Hayward, Alan F. Wright, Ulf Gyllensten, Harry Campbell, Gerd Schmitz, on behalf of the EUROSPAN consortium

PLoS Genet. 2012 Feb; 8(2): e1002490. Published online 2012 Feb 16. doi: 10.1371/journal.pgen.1002490

PMCID:: PMC3280968

Abstract Article PDF–592K

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 312982011.

Ectopic expression of cadherin 8 is sufficient to cause cyst formation in a novel 3D collagen matrix renal tubule culture

Rajesh Kher, Edward C. Sha, Miguel R. Escobar, Eric M. Andreoli, Pu Wang, Wei Min Xu, Angela Wandinger-Ness, Robert L. Bacallao

Am J Physiol Cell Physiol. 2011 Jul; 301(1): C99–C105. Published online 2011 Mar 9. doi: 10.1152/ajpcell.00151.2010

PMCID:: PMC3129820

Abstract Article

Select item 300387612.

Rare familial 16q21 microdeletions under a linkage peak implicate cadherin 8 (CDH8) in susceptibility to autism and learning disability

Alistair T Pagnamenta, Hameed Khan, Susan Walker, Dianne Gerrelli, Kirsty Wing, Maria Clara Bonaglia, Roberto Giorda, Tom Berney, Elisa Mani, Massimo Molteni, Dalila Pinto, Ann Le Couteur, Joachim Hallmayer, James S Sutcliffe, Peter Szatmari, Andrew D Paterson, Stephen W Scherer, Veronica J Vieland, Anthony P Monaco

J Med Genet. 2011 Jan; 48(1): 48–54. Published online 2010 Oct 23. doi: 10.1136/jmg.2010.079426