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Items: 15

1.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
2.
Noncoding RNA MaIL1 is an integral component of the TLR4–TRIF pathway
Marina Aznaourova, Harshavardhan Janga, Stephanie Sefried, Andreas Kaufmann, Jens Dorna, Sarah M. Volkers, Philipp Georg, Marcus Lechner, Judith Hoppe, Simon Dökel, Nils Schmerer, Achim D. Gruber, Uwe Linne, Stefan Bauer, Leif E. Sander, Bernd Schmeck, Leon N. Schulte
Proc Natl Acad Sci U S A. 2020 Apr 21; 117(16): 9042–9053. Published online 2020 Apr 2. doi: 10.1073/pnas.1920393117
PMCID:
PMC7183186
AbstractArticlePDF–2.1M
3.
Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRASG13D
Susan A. Kennedy, Mohamed-Ali Jarboui, Sriganesh Srihari, Cinzia Raso, Kenneth Bryan, Layal Dernayka, Theodosia Charitou, Manuel Bernal-Llinares, Carlos Herrera-Montavez, Aleksandar Krstic, David Matallanas, Max Kotlyar, Igor Jurisica, Jasna Curak, Victoria Wong, Igor Stagljar, Thierry LeBihan, Lisa Imrie, Priyanka Pillai, Miriam A. Lynn, Erik Fasterius, Cristina Al-Khalili Szigyarto, James Breen, Christina Kiel, Luis Serrano, Nora Rauch, Oleksii Rukhlenko, Boris N. Kholodenko, Luis F. Iglesias-Martinez, Colm J. Ryan, Ruth Pilkington, Patrizia Cammareri, Owen Sansom, Steven Shave, Manfred Auer, Nicola Horn, Franziska Klose, Marius Ueffing, Karsten Boldt, David J. Lynn, Walter Kolch
Nat Commun. 2020; 11: 499. Published online 2020 Jan 24. doi: 10.1038/s41467-019-14224-9
PMCID:
PMC6981206
AbstractArticlePDF–3.7M
4.
ELMO3 – a Negative Prognostic Marker in Minor Salivary Gland Carcinoma
Ulana Kotowski, Lorenz Kadletz, Sven Schneider, Felicitas Oberndorfer, Boban M. Erovic, Matthaeus Ch. Grasl, Claudia Lill, Gregor Heiduschka
Pathol Oncol Res. 2019; 25(2): 585–591. Published online 2018 Oct 29. doi: 10.1007/s12253-018-0475-8
PMCID:
PMC6449284
AbstractArticlePDF–932K
5.
Silencing ELMO3 Inhibits the Growth, Invasion, and Metastasis of Gastric Cancer
Yan Hu, Qiongfang Yu, Yao Zhong, Wei Shen, Xiaoyan Zhou, Xu Liu, Mingpu Xu, Nanjin Zhou, Weiping Min, Dian Gao
Biomed Res Int. 2018; 2018: 3764032. Published online 2018 Sep 24. doi: 10.1155/2018/3764032
PMCID:
PMC6174816
AbstractArticlePDF–5.0M
6.
Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei
Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck
Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924
PMCID:
PMC6166682
AbstractArticlePDF–3.8M
7.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
8.
Knockdown of ELMO3 Suppresses Growth, Invasion and Metastasis of Colorectal Cancer
Hui-Yun Peng, Qiong-Fang Yu, Wei Shen, Cheng-Ming Guo, Zhen Li, Xiao-Yan Zhou, Nan-Jin Zhou, Wei-Ping Min, Dian Gao
Int J Mol Sci. 2016 Dec; 17(12): 2119. Published online 2016 Dec 16. doi: 10.3390/ijms17122119
PMCID:
PMC5187919
AbstractArticlePDF–5.4M
9.
ELMO3 is a novel biomarker for diagnosis and prognosis of non-small cell lung cancer
Wei Fan, Haikou Yang, Hong Xue, Yong Sun, Jun Zhang
Int J Clin Exp Pathol. 2015; 8(5): 5503–5508. Published online 2015 May 1.
PMCID:
PMC4503128
AbstractArticlePDF–497K
10.
G-protein coupled receptor BAI3 promotes myoblast fusion in vertebrates
Noumeira Hamoud, Viviane Tran, Louis-Philippe Croteau, Artur Kania, Jean-François Côté
Proc Natl Acad Sci U S A. 2014 Mar 11; 111(10): 3745–3750. Published online 2014 Feb 24. doi: 10.1073/pnas.1313886111
PMCID:
PMC3956190
AbstractArticlePDF–1.2M
11.
The Arf Family GTPase Arl4A Complexes with ELMO Proteins to Promote Actin Cytoskeleton Remodeling and Reveals a Versatile Ras-binding Domain in the ELMO Proteins Family
Manishha Patel, Tsai-Chen Chiang, Viviane Tran, Fang-Jen S. Lee, Jean-François Côté
J Biol Chem. 2011 Nov 11; 286(45): 38969–38979. Published online 2011 Sep 19. doi: 10.1074/jbc.M111.274191
PMCID:
PMC3234722
AbstractArticlePDF–2.5M
12.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
13.
Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes
Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano
Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406
PMCID:
PMC1356129
AbstractArticlePDF–438K
14.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
15.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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