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Items: 1 to 20 of 94

1.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
2.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
3.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
4.
The pH-sensing Rim101 pathway regulates cell size in budding yeast
Masaru Shimasawa, Jun-ichi Sakamaki, Tatsuya Maeda, Noboru Mizushima
J Biol Chem. 2023 Mar; 299(3): 102973. Published online 2023 Feb 3. doi: 10.1016/j.jbc.2023.102973
PMCID:
PMC10011510
AbstractArticlePDF–647K
5.
Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion
Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton
Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019
PMCID:
PMC9286023
AbstractArticle
6.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
7.
Tubulin isotypes optimize distinct spindle positioning mechanisms during yeast mitosis
Emmanuel T. Nsamba, Abesh Bera, Michael Costanzo, Charles Boone, Mohan L. Gupta, Jr.
J Cell Biol. 2021 Dec 6; 220(12): e202010155. Published online 2021 Nov 5. doi: 10.1083/jcb.202010155
PMCID:
PMC8576917
AbstractArticlePDF–7.4M
8.
Investigation of RNA metabolism through large-scale genetic interaction profiling in yeast
Laurence Decourty, Christophe Malabat, Emmanuel Frachon, Alain Jacquier, Cosmin Saveanu
Nucleic Acids Res. 2021 Sep 7; 49(15): 8535–8555. Published online 2021 Aug 6. doi: 10.1093/nar/gkab680
PMCID:
PMC8421204
AbstractArticlePDF–2.9M
9.
Dynamic Histone H3 Modifications Regulate Meiosis Initiation via Respiration
Jian Shi, Yanjie Ma, Hui Hua, Yujiao Liu, Wei Li, Hongxiu Yu, Chao Liu
Front Cell Dev Biol. 2021; 9: 646214. Published online 2021 Apr 1. doi: 10.3389/fcell.2021.646214
PMCID:
PMC8047140
AbstractArticlePDF–3.6M
10.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
11.
A genetic interaction map centered on cohesin reveals auxiliary factors involved in sister chromatid cohesion in S. cerevisiae
Su Ming Sun, Amandine Batté, Mireille Elmer, Sophie C. van der Horst, Tibor van Welsem, Gordon Bean, Trey Ideker, Fred van Leeuwen, Haico van Attikum
J Cell Sci. 2020 May 15; 133(10): jcs237628. Published online 2020 May 22. doi: 10.1242/jcs.237628
PMCID:
PMC7325435
AbstractArticle
12.
Transfer of the Septin Ring to Cytokinetic Remnants in ER stress Directs Age-Sensitive Cell Cycle Re-entry
Jesse T. Chao, Francisco Piña, Masayuki Onishi, Yifat Cohen, Ya-Shiuan Lai, Maya Schuldiner, Maho Niwa
Dev Cell. Author manuscript; available in PMC 2020 Oct 21.
Published in final edited form as: Dev Cell. 2019 Oct 21; 51(2): 173–191.e5. Published online 2019 Sep 26. doi: 10.1016/j.devcel.2019.08.017
PMCID:
PMC7085932
AbstractArticlePDF–2.5M
13.
How Boundaries Form: Linked Nonautonomous Feedback Loops Regulate Pattern Formation in Yeast Colonies
Sarah Piccirillo, Abbigail H. McCune, Samuel R. Dedert, Cassandra G. Kempf, Brian Jimenez, Shane R. Solst, LeAnn M. Tiede-Lewis, Saul M. Honigberg
Genetics. 2019 Dec; 213(4): 1373–1386. Published online 2019 Oct 16. doi: 10.1534/genetics.119.302700
PMCID:
PMC6893387
AbstractArticlePDF–1.5M
14.
A nuclear role for the DEAD-box protein Dbp5 in tRNA export
Azra Lari, Arvind Arul Nambi Rajan, Rima Sandhu, Taylor Reiter, Rachel Montpetit, Barry P Young, Chris JR Loewen, Ben Montpetit
eLife. 2019; 8: e48410. Published online 2019 Aug 27. doi: 10.7554/eLife.48410
Correction in:
eLife. 2020; 9: e63264.
PMCID:
PMC6711706
AbstractArticlePDF–3.8M
15.
Aggregate Filamentous Growth Responses in Yeast
Jacky Chow, Heather M. Dionne, Aditi Prabhakar, Amit Mehrotra, Jenn Somboonthum, Beatriz Gonzalez, Mira Edgerton, Paul J. Cullen
mSphere. 2019 Mar-Apr; 4(2): e00702-18. Published online 2019 Mar 6. doi: 10.1128/mSphere.00702-18
PMCID:
PMC6403458
AbstractArticlePDF–3.4M
16.
The cellular economy of the Saccharomyces cerevisiae zinc proteome
Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide
Metallomics. Author manuscript; available in PMC 2019 Dec 12.
Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j
PMCID:
PMC6291366
AbstractArticlePDF–3.0M
17.
The mitochondrial single-stranded DNA binding protein from S. cerevisiae, Rim1, does not form stable homo-tetramers and binds DNA as a dimer of dimers
Saurabh P Singh, Vandna Kukshal, Paolo De Bona, Edwin Antony, Roberto Galletto
Nucleic Acids Res. 2018 Aug 21; 46(14): 7193–7205. Published online 2018 Jun 21. doi: 10.1093/nar/gky530
PMCID:
PMC6101547
AbstractArticlePDF–2.1M
18.
Diacylglycerol triggers Rim101 pathway–dependent necrosis in yeast: a model for lipotoxicity
Patrick Rockenfeller, Martin Smolnig, Jutta Diessl, Mina Bashir, Vera Schmiedhofer, Oskar Knittelfelder, Julia Ring, Joakim Franz, Ines Foessl, Muhammad J. Khan, René Rost, Wolfgang F. Graier, Guido Kroemer, Andreas Zimmermann, Didac Carmona-Gutierrez, Tobias Eisenberg, Sabrina Büttner, Stephan J. Sigrist, Ronald P. Kühnlein, Sepp D. Kohlwein, Campbell W. Gourlay, Frank Madeo
Cell Death Differ. 2018 Apr; 25(4): 765–781. Published online 2017 Dec 11. doi: 10.1038/s41418-017-0014-2
PMCID:
PMC5864183
AbstractArticlePDF–3.8M
19.
A Role for the Respiratory Chain in Regulating Meiosis Initiation in Saccharomyces cerevisiae
Haichao Zhao, Qian Wang, Chao Liu, Yongliang Shang, Fuping Wen, Fang Wang, Weixiao Liu, Wei Xiao, Wei Li
Genetics. 2018 Mar; 208(3): 1181–1194. Published online 2018 Jan 4. doi: 10.1534/genetics.118.300689
PMCID:
PMC5844330
AbstractArticlePDF–2.1M
20.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M

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