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Items: 1 to 20 of 24

1.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
2.
Identifying novel members of the Wntless interactome through genetic and candidate gene approaches.
Jessica Petko, Trevor Tranchina, Goral Patel, Robert Levenson, Stephanie Justice-Bitner
Brain Res Bull. Author manuscript; available in PMC 2019 Jun 2.
Published in final edited form as: Brain Res Bull. 2018 Apr; 138: 96–105. Published online 2017 Jul 20. doi: 10.1016/j.brainresbull.2017.07.004
PMCID:
PMC6545234
AbstractArticlePDF–1.7M
3.
Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei
Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck
Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924
PMCID:
PMC6166682
AbstractArticlePDF–3.8M
4.
Estrogen-regulated feedback loop limits the efficacy of estrogen receptor–targeted breast cancer therapy
Tengfei Xiao, Wei Li, Xiaoqing Wang, Han Xu, Jixin Yang, Qiu Wu, Ying Huang, Joseph Geradts, Peng Jiang, Teng Fei, David Chi, Chongzhi Zang, Qi Liao, Jonathan Rennhack, Eran Andrechek, Nanlin Li, Simone Detre, Mitchell Dowsett, Rinath M. Jeselsohn, X. Shirley Liu, Myles Brown
Proc Natl Acad Sci U S A. 2018 Jul 31; 115(31): 7869–7878. Published online 2018 Jul 9. doi: 10.1073/pnas.1722617115
PMCID:
PMC6077722
AbstractArticlePDF–2.4M
5.
Alterations in the brain interactome of the intrinsically disordered N-terminal domain of the cellular prion protein (PrPC) in Alzheimer’s disease
Sarah Ulbrich, Petra Janning, Ralf Seidel, Jakob Matschke, Anika Gonsberg, Sebastian Jung, Markus Glatzel, Martin Engelhard, Konstanze F. Winklhofer, Jörg Tatzelt
PLoS One. 2018; 13(5): e0197659. Published online 2018 May 23. doi: 10.1371/journal.pone.0197659
PMCID:
PMC5965872
AbstractArticlePDF–2.4M
6.
Transient Fcho1/2⋅Eps15/R⋅AP-2 Nanoclusters Prime the AP-2 Clathrin Adaptor for Cargo Binding
Li Ma, Perunthottathu K. Umasankar, Antoni G. Wrobel, Anastasia Lymar, Airlie J. McCoy, Sachin S. Holkar, Anupma Jha, Tirthadipa Pradhan-Sundd, Simon C. Watkins, David J. Owen, Linton M. Traub
Dev Cell. 2016 Jun 6; 37(5): 428–443. doi: 10.1016/j.devcel.2016.05.003
PMCID:
PMC4921775
AbstractArticlePDF–10M
7.
Structural basis for the recognition of two consecutive mutually interacting DPF motifs by the SGIP1 μ homology domain
Atsushi Shimada, Atsuko Yamaguchi, Daisuke Kohda
Sci Rep. 2016; 6: 19565. Published online 2016 Jan 29. doi: 10.1038/srep19565
PMCID:
PMC4731787
AbstractArticlePDF–2.1M
8.
A genome-wide association study of early menopause and the combined impact of identified variants
John R. B. Perry, Tanguy Corre, Tõnu Esko, Daniel I. Chasman, Krista Fischer, Nora Franceschini, Chunyan He, Zoltan Kutalik, Massimo Mangino, Lynda M. Rose, Albert Vernon Smith, Lisette Stolk, Patrick Sulem, Michael N. Weedon, Wei V. Zhuang, Alice Arnold, Alan Ashworth, Sven Bergmann, Julie E. Buring, Andrea Burri, Constance Chen, Marilyn C. Cornelis, David J. Couper, Mark O. Goodarzi, Vilmundur Gudnason, Tamara Harris, Albert Hofman, Michael Jones, Peter Kraft, Lenore Launer, Joop S. E. Laven, Guo Li, Barbara McKnight, Corrado Masciullo, Lili Milani, Nicholas Orr, Bruce M. Psaty, Paul M. Ridker, Fernando Rivadeneira, Cinzia Sala, Andres Salumets, Minouk Schoemaker, Michela Traglia, Gérard Waeber, Stephen J. Chanock, Ellen W. Demerath, Melissa Garcia, Susan E. Hankinson, Frank B. Hu, David J. Hunter, Kathryn L. Lunetta, Andres Metspalu, Grant W. Montgomery, Joanne M. Murabito, Anne B. Newman, Ken K. Ong, Tim D. Spector, Kari Stefansson, Anthony J. Swerdlow, Unnur Thorsteinsdottir, Rob M. Van Dam, André G. Uitterlinden, Jenny A. Visser, Peter Vollenweider, Daniela Toniolo, Anna Murray
Hum Mol Genet. 2013 Apr 1; 22(7): 1465–1472. Published online 2013 Jan 9. doi: 10.1093/hmg/dds551
PMCID:
PMC3596848
AbstractArticlePDF–135K
9.
Genome-Wide Association Study of Antiphospholipid Antibodies
M. Ilyas Kamboh, Xingbin Wang, Amy H. Kao, Michael M. Barmada, Ann Clarke, Rosalind Ramsey-Goldman, Susan Manzi, F. Yesim Demirci
Autoimmune Dis. 2013; 2013: 761046. Published online 2013 Feb 24. doi: 10.1155/2013/761046
PMCID:
PMC3595708
AbstractArticlePDF–1.5M
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
11.
Non-replication of an association of SGIP1 SNPs with alcohol dependence and resting theta EEG power
Jaime Derringer, Robert F. Krueger, Niklas Manz, Bernice Porjesz, Laura Almasy, Ebony Bookman, Howard J. Edenberg, John R. Kramer, Jay A. Tischfield, GENEVA consortium, Laura J. Bierut
Psychiatr Genet. Author manuscript; available in PMC 2012 Oct 1.
Published in final edited form as: Psychiatr Genet. 2011 Oct; 21(5): 265–266. doi: 10.1097/YPG.0b013e32834371fd
PMCID:
PMC3139721
AbstractArticlePDF–276K
12.
Personalized Smoking Cessation: Interactions between Nicotine Dose, Dependence and Quit-Success Genotype Score
Jed E Rose, Frédérique M Behm, Tomas Drgon, Catherine Johnson, George R Uhl
Mol Med. 2010 Jul-Aug; 16(7-8): 247–253. Published online 2010 Mar 17. doi: 10.2119/molmed.2009.00159
Correction in:
Mol Med. 2012; 18(1): 729.
PMCID:
PMC2896464
AbstractArticlePDF–2.4M
13.
Genome-wide association identifies candidate genes that influence the human electroencephalogram
Colin A. Hodgkinson, Mary-Anne Enoch, Vibhuti Srivastava, Justine S. Cummins-Oman, Cherisse Ferrier, Polina Iarikova, Sriram Sankararaman, Goli Yamini, Qiaoping Yuan, Zhifeng Zhou, Bernard Albaugh, Kenneth V. White, Pei-Hong Shen, David Goldman
Proc Natl Acad Sci U S A. 2010 May 11; 107(19): 8695–8700. Published online 2010 Apr 26. doi: 10.1073/pnas.0908134107
PMCID:
PMC2889314
AbstractArticlePDF–594K
14.
Gene Variants Associated With Ischemic Stroke: The Cardiovascular Health Study
May M. Luke, Ellen S. O’Meara, Charles M. Rowland, Dov Shiffman, Lance A. Bare, Andre R. Arellano, W.T. Longstreth, Jr, Thomas Lumley, Kenneth Rice, Russell P. Tracy, James J. Devlin, Bruce M. Psaty
Stroke. Author manuscript; available in PMC 2010 Jun 5.
Published in final edited form as: Stroke. 2009 Feb; 40(2): 363–368. Published online 2008 Nov 20. doi: 10.1161/STROKEAHA.108.521328
PMCID:
PMC2881155
AbstractArticlePDF–352K
15.
Syp1 is a conserved endocytic adaptor that contains domains involved in cargo selection and membrane tubulation
Amanda Reider, Sarah L Barker, Sanjay K Mishra, Young Jun Im, Lymarie Maldonado-Báez, James H Hurley, Linton M Traub, Beverly Wendland
EMBO J. 2009 Oct 21; 28(20): 3103–3116. Published online 2009 Aug 27. doi: 10.1038/emboj.2009.248
PMCID:
PMC2771086
AbstractArticlePDF–2.0M
16.
Association of Gene Variants with Incident Myocardial Infarction in the Cardiovascular Health Study
Dov Shiffman, Ellen S O’Meara, Lance A Bare, Charles M Rowland, Judy Z Louie, Andre R Arellano, Thomas Lumley, Kenneth Rice, Olga Iakoubova, May M Luke, Bradford A Young, Mary J Malloy, John P Kane, Stephen G Ellis, Russell P Tracy, James J Devlin, Bruce M Psaty
Arterioscler Thromb Vasc Biol. Author manuscript; available in PMC 2009 Feb 5.
Published in final edited form as: Arterioscler Thromb Vasc Biol. 2008 Jan; 28(1): 173–179. Published online 2007 Nov 1. doi: 10.1161/ATVBAHA.107.153981
PMCID:
PMC2636623
AbstractArticlePDF–328K
17.
Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes
Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano
Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406
PMCID:
PMC1356129
AbstractArticlePDF–438K
18.
The LIFEdb database in 2006
Alexander Mehrle, Heiko Rosenfelder, Ingo Schupp, Coral del Val, Dorit Arlt, Florian Hahne, Stephanie Bechtel, Jeremy Simpson, Oliver Hofmann, Winston Hide, Karl-Heinz Glatting, Wolfgang Huber, Rainer Pepperkok, Annemarie Poustka, Stefan Wiemann
Nucleic Acids Res. 2006 Jan 1; 34(Database issue): D415–D418. Published online 2005 Dec 28. doi: 10.1093/nar/gkj139
PMCID:
PMC1347501
AbstractArticlePDF–301K
19.
Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing
Jeremy C. Simpson, Ruth Wellenreuther, Annemarie Poustka, Rainer Pepperkok, Stefan Wiemann
EMBO Rep. 2000 Sep 15; 1(3): 287–292. doi: 10.1093/embo-reports/kvd058
PMCID:
PMC1083732
AbstractArticlePDF–375K
20.
From ORFeome to Biology: A Functional Genomics Pipeline
Stefan Wiemann, Dorit Arlt, Wolfgang Huber, Ruth Wellenreuther, Simone Schleeger, Alexander Mehrle, Stephanie Bechtel, Mamatha Sauermann, Ulrike Korf, Rainer Pepperkok, Holger Sültmann, Annemarie Poustka
Genome Res. 2004 Oct; 14(10b): 2136–2144. doi: 10.1101/gr.2576704
PMCID:
PMC528930
AbstractArticlePDF–459K

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