PMC Links for GEO Profiles (Select 129544592) - PMC

Engin Demirdizen, Ruslan Al-Ali, Ashwin Narayanan, Xueyuan Sun, Julianna Patricia Varga, Bianca Steffl, Manuela Brom, Damir Krunic, Claudia Schmidt, Gabriele Schmidt, Felix Bestvater, Julian Taranda, Şevin Turcan

Neuro Oncol. 2023 Jun; 25(6): 1031–1043. Published online 2022 Nov 22. doi: 10.1093/neuonc/noac233

PMCID:: PMC10237422

Abstract Article PDF–23M

Select item 93485764.

Chr21 protein–protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer’s disease

Julia Viard, Yann Loe-Mie, Rachel Daudin, Malik Khelfaoui, Christine Plancon, Anne Boland, Francisco Tejedor, Richard L Huganir, Eunjoon Kim, Makoto Kinoshita, Guofa Liu, Volker Haucke, Thomas Moncion, Eugene Yu, Valérie Hindie, Henri Bléhaut, Clotilde Mircher, Yann Herault, Jean-François Deleuze, Jean-Christophe Rain, Michel Simonneau, Aude-Marie Lepagnol-Bestel

Life Sci Alliance. 2022 Dec; 5(12): e202101205. Published online 2022 Aug 1. doi: 10.26508/lsa.202101205

PMCID:: PMC9348576

Abstract Article PDF–3.0M

Select item 90375545.

C5orf51 is a component of the MON1-CCZ1 complex and controls RAB7A localization and stability during mitophagy

Bing-Ru Yan, Taoyingnan Li, Etienne Coyaud, Estelle M. N. Laurent, Jonathan St-Germain, Yuhuan Zhou, Peter K. Kim, Brian Raught, John H. Brumell

Autophagy. 2022; 18(4): 829–840. Published online 2021 Aug 25. doi: 10.1080/15548627.2021.1960116

PMCID:: PMC9037554

Abstract Article PDF–4.1M

Select item 84296486.

ORP1L mediated PI(4)P signaling at ER-lysosome-mitochondrion three-way contact contributes to mitochondrial division

Maxime Boutry, Peter K. Kim

Nat Commun. 2021; 12: 5354. Published online 2021 Sep 9. doi: 10.1038/s41467-021-25621-4

PMCID:: PMC8429648

Abstract Article PDF–3.5M

Select item 81650307.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 77054508.

FFAT motif phosphorylation controls formation and lipid transfer function of inter‐organelle contacts

Thomas Di Mattia, Arthur Martinet, Souade Ikhlef, Alastair G McEwen, Yves Nominé, Corinne Wendling, Pierre Poussin‐Courmontagne, Laetitia Voilquin, Pascal Eberling, Frank Ruffenach, Jean Cavarelli, John Slee, Timothy P Levine, Guillaume Drin, Catherine Tomasetto, Fabien Alpy

EMBO J. 2020 Dec 1; 39(23): e104369. Published online 2020 Oct 30. doi: 10.15252/embj.2019104369

PMCID:: PMC7705450

Abstract Article PDF–4.4M

Select item 71859629.

Oxysterol-binding protein-related protein 1 variants have opposing cholesterol transport activities from the endolysosomes

Kexin Zhao, Jason Foster, Neale D. Ridgway

Mol Biol Cell. 2020 Apr 1; 31(8): 793–802. doi: 10.1091/mbc.E19-12-0697

PMCID:: PMC7185962

Abstract Article PDF–1.8M

Select item 716998310.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 638111011.

Allosteric enhancement of ORP1-mediated cholesterol transport by PI(4,5)P₂/PI(3,4)P₂

Jiangqing Dong, Ximing Du, Huan Wang, Jue Wang, Chang Lu, Xiang Chen, Zhiwen Zhu, Zhipu Luo, Li Yu, Andrew J. Brown, Hongyuan Yang, Jia-Wei Wu

Nat Commun. 2019; 10: 829. Published online 2019 Feb 19. doi: 10.1038/s41467-019-08791-0

PMCID:: PMC6381110

Abstract Article PDF–4.2M

Select item 636316412.

Structural basis of human ORP1-Rab7 interaction for the late-endosome and lysosome targeting

Junsen Tong, Lingchen Tan, ChangJu Chun, Young Jun Im

PLoS One. 2019; 14(2): e0211724. Published online 2019 Feb 5. doi: 10.1371/journal.pone.0211724

PMCID:: PMC6363164

Abstract Article PDF–1.9M

Select item 613093413.

A non-canonical GTPase interaction enables ORP1L-Rab7-RILP complex formation and late endosome positioning

Xinli Ma, Kai Liu, Jian Li, Huanhuan Li, Jun Li, Yingfang Liu, Chonglin Yang, Huanhuan Liang

J Biol Chem. 2018 Sep 7; 293(36): 14155–14164. Published online 2018 Jul 16. doi: 10.1074/jbc.RA118.001854

PMCID:: PMC6130934

Abstract Article PDF–2.9M

Select item 603070114.

Identification of MOSPD2, a novel scaffold for endoplasmic reticulum membrane contact sites

Thomas Di Mattia, Léa P Wilhelm, Souade Ikhlef, Corinne Wendling, Danièle Spehner, Yves Nominé, Francesca Giordano, Carole Mathelin, Guillaume Drin, Catherine Tomasetto, Fabien Alpy

EMBO Rep. 2018 Jul; 19(7): e45453. Published online 2018 Jun 1. doi: 10.15252/embr.201745453

PMCID:: PMC6030701

Abstract Article PDF–4.6M

Select item 599939615.

The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation

Tyler B Faust, Yang Li, Curtis W Bacon, Gwendolyn M Jang, Amit Weiss, Bhargavi Jayaraman, Billy W Newton, Nevan J Krogan, Iván D'Orso, Alan D Frankel

eLife. 2018; 7: e31879. Published online 2018 May 30. doi: 10.7554/eLife.31879

PMCID:: PMC5999396

Abstract Article PDF–3.6M

Select item 594137116.

Histone methyltransferase SETDB1 promotes cells proliferation and migration by interacting withTiam1 in hepatocellular carcinoma

Yuqin Zhang, Jing Huang, Qisheng Li, Keli Chen, Yonghao Liang, Zetao Zhan, Feng Ye, Wen Ni, Longhua Chen, Yi Ding

BMC Cancer. 2018; 18: 539. Published online 2018 May 8. doi: 10.1186/s12885-018-4464-9

PMCID:: PMC5941371

Abstract Article PDF–4.3M

Select item 567858117.

RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Nila Roy Choudhury, Gregory Heikel, Maryia Trubitsyna, Peter Kubik, Jakub Stanislaw Nowak, Shaun Webb, Sander Granneman, Christos Spanos, Juri Rappsilber, Alfredo Castello, Gracjan Michlewski

BMC Biol. 2017; 15: 105. Published online 2017 Nov 8. doi: 10.1186/s12915-017-0444-9

PMCID:: PMC5678581

Abstract Article PDF–3.2M

Select item 553161118.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 533179519.

Adenovirus Modulates Toll-Like Receptor 4 Signaling by Reprogramming ORP1L-VAP Protein Contacts for Cholesterol Transport from Endosomes to the Endoplasmic Reticulum

Nicholas L. Cianciola, Stacey Chung, Danny Manor, Cathleen R. Carlin

J Virol. 2017 Mar 15; 91(6): e01904-16. Prepublished online 2017 Jan 11. Published online 2017 Feb 28. doi: 10.1128/JVI.01904-16

PMCID:: PMC5331795

Abstract Article PDF–4.5M

Select item 517750320.

Interactions between the Coxiella burnetii parasitophorous vacuole and the endoplasmic reticulum involve the host protein ORP1L

Anna V. Justis, Bryan Hansen, Paul A. Beare, Kourtney B. King, Robert A. Heinzen, Stacey D. Gilk

Cell Microbiol. Author manuscript; available in PMC 2018 Jan 1.

Published in final edited form as: Cell Microbiol. 2017 Jan; 19(1): 10.1111/cmi.12637. Published online 2016 Jul 15. doi: 10.1111/cmi.12637

PMCID:: PMC5177503

Abstract Article PDF–2.6M

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