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Items: 18

1.
A standardized nomenclature for mammalian histone genes
Ruth L. Seal, Paul Denny, Elspeth A. Bruford, Anna K. Gribkova, David Landsman, William F. Marzluff, Monica McAndrews, Anna R. Panchenko, Alexey K. Shaytan, Paul B. Talbert
Epigenetics Chromatin. 2022; 15: 34. Published online 2022 Oct 1. doi: 10.1186/s13072-022-00467-2
PMCID:
PMC9526256
AbstractArticlePDF–1.1M
2.
Multivalent DNA and nucleosome acidic patch interactions specify VRK1 mitotic localization and activity
Gabrielle R Budziszewski, Yani Zhao, Cathy J Spangler, Katarzyna M Kedziora, Michael R Williams, Dalal N Azzam, Aleksandra Skrajna, Yuka Koyama, Andrew P Cesmat, Holly C Simmons, Eyla C Arteaga, Joshua D Strauss, Dmitri Kireev, Robert K McGinty
Nucleic Acids Res. 2022 May 6; 50(8): 4355–4371. Published online 2022 Apr 7. doi: 10.1093/nar/gkac198
PMCID:
PMC9071384
AbstractArticlePDF–8.7M
3.
SARS-CoV-2 Disrupts Splicing, Translation, and Protein Trafficking to Suppress Host Defenses
Abhik K. Banerjee, Mario R. Blanco, Emily A. Bruce, Drew D. Honson, Linlin M. Chen, Amy Chow, Prashant Bhat, Noah Ollikainen, Sofia A. Quinodoz, Colin Loney, Jasmine Thai, Zachary D. Miller, Aaron E. Lin, Madaline M. Schmidt, Douglas G. Stewart, Daniel Goldfarb, Giuditta De Lorenzo, Suzannah J. Rihn, Rebecca M. Voorhees, Jason W. Botten, Devdoot Majumdar, Mitchell Guttman
Cell. 2020 Nov 25; 183(5): 1325–1339.e21. doi: 10.1016/j.cell.2020.10.004
PMCID:
PMC7543886
AbstractArticle
4.
The variant Polycomb Repressor Complex 1 component PCGF1 interacts with a pluripotency sub-network that includes DPPA4, a regulator of embryogenesis
Giorgio Oliviero, Nayla Munawar, Ariane Watson, Gundula Streubel, Gwendolyn Manning, Vivian Bardwell, Adrian P. Bracken, Gerard Cagney
Sci Rep. 2015; 5: 18388. Published online 2015 Dec 21. doi: 10.1038/srep18388
PMCID:
PMC4685312
AbstractArticlePDF–1.5M
5.
hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes
Philippe Lamesch, Ning Li, Stuart Milstein, Changyu Fan, Tong Hao, Gabor Szabo, Zhenjun Hu, Kavitha Venkatesan, Graeme Bethel, Paul Martin, Jane Rogers, Stephanie Lawlor, Stuart McLaren, Amélie Dricot, Heather Borick, Michael E. Cusick, Jean Vandenhaute, Ian Dunham, David E. Hill, Marc Vidal
Genomics. 2007 Mar; 89(3): 307–315. doi: 10.1016/j.ygeno.2006.11.012
PMCID:
PMC4647941
AbstractArticle
6.
Quantitative Proteomics Reveals Dynamic Interactions of the Minichromosome Maintenance Complex (MCM) in the Cellular Response to Etoposide Induced DNA Damage
Romain Drissi, Marie-Line Dubois, Mélanie Douziech, François-Michel Boisvert
Mol Cell Proteomics. 2015 Jul; 14(7): 2002–2013. Published online 2015 May 11. doi: 10.1074/mcp.M115.048991
PMCID:
PMC4587322
AbstractArticlePDF–3.0M
7.
Structural insights into recognition of acetylated histone ligands by the BRPF1 bromodomain
Mulu Y. Lubula, Brian E. Eckenroth, Samuel Carlson, Amanda Poplawski, Maksymilian Chruszcz, Karen C. Glass
FEBS Lett. Author manuscript; available in PMC 2015 Nov 3.
Published in final edited form as: FEBS Lett. 2014 Nov 3; 588(21): 3844–3854. Published online 2014 Sep 30. doi: 10.1016/j.febslet.2014.09.028
PMCID:
PMC4252766
AbstractArticlePDF–1.3M
8.
In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine
Simona Principe, E. Ellen Jones, Yunee Kim, Ankit Sinha, Julius O. Nyalwidhe, Jasmin Brooks, O. John Semmes, Dean A. Troyer, Raymond S. Lance, Thomas Kislinger, Richard R. Drake
Proteomics. Author manuscript; available in PMC 2014 May 1.
Published in final edited form as: Proteomics. 2013 May; 13(0): 1667–1671. Published online 2013 Apr 23. doi: 10.1002/pmic.201200561
PMCID:
PMC3773505
AbstractArticlePDF–630K
9.
Macro Histone H2A1.2 (MacroH2A1) Protein Suppresses Mitotic Kinase VRK1 during Interphase
Wanil Kim, Goutam Chakraborty, Sangjune Kim, Joon Shin, Choon-Ho Park, Min-Woo Jeong, Nagakumar Bharatham, Ho Sup Yoon, Kyong-Tai Kim
J Biol Chem. 2012 Feb 17; 287(8): 5278–5289. Published online 2011 Dec 22. doi: 10.1074/jbc.M111.281709
PMCID:
PMC3285308
AbstractArticlePDF–2.9M
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
11.
Genome-wide YFP Fluorescence Complementation Screen Identifies New Regulators for Telomere Signaling in Human Cells
Ok-Hee Lee, Hyeung Kim, Quanyuan He, Hwa Jin Baek, Dong Yang, Liuh-Yow Chen, Jiancong Liang, Heekyung Kate Chae, Amin Safari, Dan Liu, Zhou Songyang
Mol Cell Proteomics. 2011 Feb; 10(2): M110.001628. Published online 2010 Nov 11. doi: 10.1074/mcp.M110.001628
PMCID:
PMC3033672
AbstractArticlePDF–1.5M
12.
Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics
Eric J. Bennett, John Rush, Steven P. Gygi, J. Wade Harper
Cell. Author manuscript; available in PMC 2011 Dec 10.
Published in final edited form as: Cell. 2010 Dec 10; 143(6): 951–965. doi: 10.1016/j.cell.2010.11.017
PMCID:
PMC3008586
AbstractArticlePDF–3.0M
13.
Molecular mimicry between IL-33 and KSHV for attachment to chromatin through the H2A–H2B acidic pocket
Lucie Roussel, Monique Erard, Corinne Cayrol, Jean-Philippe Girard
EMBO Rep. 2008 Oct; 9(10): 1006–1012. Published online 2008 Aug 8. doi: 10.1038/embor.2008.145
PMCID:
PMC2572127
AbstractArticlePDF–1.2M
14.
Regulation of transcription by the heterogeneous nuclear ribonucleoprotein E1B-AP5 is mediated by complex formation with the novel bromodomain-containing protein BRD7.
Julia Kzhyshkowska, Andre Rusch, Hans Wolf, Thomas Dobner
Biochem J. 2003 Apr 15; 371(Pt 2): 385–393. doi: 10.1042/BJ20021281
PMCID:
PMC1223277
SummaryPDF–363K
15.
Regulation of HIV-1 gene expression by histone acetylation and factor recruitment at the LTR promoter
Marina Lusic, Alessandro Marcello, Anna Cereseto, Mauro Giacca
EMBO J. 2003 Dec 15; 22(24): 6550–6561. doi: 10.1093/emboj/cdg631
PMCID:
PMC291826
AbstractArticlePDF–664K
16.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K
17.
Transcriptional Activation of the Integrated Chromatin-Associated Human Immunodeficiency Virus Type 1 Promoter
Aboubaker El Kharroubi, Graziella Piras, Ralf Zensen, Malcolm A. Martin
Mol Cell Biol. 1998 May; 18(5): 2535–2544. doi: 10.1128/mcb.18.5.2535
PMCID:
PMC110633
AbstractArticlePDF–1.6M
18.
Gadd45, a p53-Responsive Stress Protein, Modifies DNA Accessibility on Damaged Chromatin
France Carrier, Philippe T. Georgel, Philippe Pourquier, Mellissa Blake, H. Udo Kontny, Michael J. Antinore, Marzia Gariboldi, Timothy G. Myers, John N. Weinstein, Yves Pommier, Albert J. Fornace, Jr.
Mol Cell Biol. 1999 Mar; 19(3): 1673–1685. doi: 10.1128/mcb.19.3.1673
PMCID:
PMC83961
AbstractArticlePDF–1.8M

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