PMC Links for GEO Profiles (Select 132102022) - PMC

Lisa Gawriyski, Zenglai Tan, Xiaonan Liu, Iftekhar Chowdhury, Dicle Malaymar Pinar, Qin Zhang, Jere Weltner, Eeva-Mari Jouhilahti, Gong-Hong Wei, Juha Kere, Markku Varjosalo

EMBO Rep. 2024 Mar; 25(3): 1589–1622. Published online 2024 Jan 31. doi: 10.1038/s44319-024-00074-0

PMCID:: PMC10933267

Abstract Article PDF–2.9M

Select item 108698004.

The Eyes Absent family members EYA4 and EYA1 promote PLK1 activation and successful mitosis through tyrosine dephosphorylation

Christopher B. Nelson, Samuel Rogers, Kaushik Roychoudhury, Yaw Sing Tan, Caroline J. Atkinson, Alexander P. Sobinoff, Christopher G. Tomlinson, Anton Hsu, Robert Lu, Eloise Dray, Michelle Haber, Jamie I. Fletcher, Anthony J. Cesare, Rashmi S. Hegde, Hilda A. Pickett

Nat Commun. 2024; 15: 1385. Published online 2024 Feb 15. doi: 10.1038/s41467-024-45683-4

PMCID:: PMC10869800

Abstract Article PDF–9.3M

Select item 105658765.

Pulse-SILAC and Interactomics Reveal Distinct DDB1-CUL4–Associated Factors, Cellular Functions, and Protein Substrates

Jennifer Raisch, Marie-Line Dubois, Marika Groleau, Dominique Lévesque, Thomas Burger, Carla-Marie Jurkovic, Romain Brailly, Gwendoline Marbach, Alyson McKenna, Catherine Barrette, Pierre-Étienne Jacques, François-Michel Boisvert

Mol Cell Proteomics. 2023 Oct; 22(10): 100644. Published online 2023 Sep 7. doi: 10.1016/j.mcpro.2023.100644

PMCID:: PMC10565876

Abstract Article PDF–3.7M

Select item 104998216.

Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets

Filip Mihalič, Caroline Benz, Eszter Kassa, Richard Lindqvist, Leandro Simonetti, Raviteja Inturi, Hanna Aronsson, Eva Andersson, Celestine N. Chi, Norman E. Davey, Anna K. Överby, Per Jemth, Ylva Ivarsson

Nat Commun. 2023; 14: 5636. Published online 2023 Sep 13. doi: 10.1038/s41467-023-41312-8

PMCID:: PMC10499821

Abstract Article PDF–2.6M

Select item 103938587.

Dynamic interplay between corticosteroid treatment and the role of SRC-1 gene dysregulation in the progression of WHO-Grade 4 Astrocytoma

Maher Kurdi, Motaz M Fadul, Bassam M. J. Addas, Eyad Faizo, Shadi Alkhayyat, Ahmed K. Bamaga, Taghreed Alsinani, Yousef Katib, Fahad Okal, Yazid Maghrabi, Abdulrahman J. Sabbagh, Rana Moshref, Sultan Albalawi, Alaa Alkhotani, Taher F. Halawa, Nasser Mulla, Sahar Hakamy, Saleh Baeesa

J Neurooncol. 2023; 163(3): 693–705. Published online 2023 Jul 4. doi: 10.1007/s11060-023-04385-5

PMCID:: PMC10393858

Abstract Article PDF–1.4M

Select item 98204608.

The Hippocampal Response to Acute Corticosterone Elevation Is Altered in a Mouse Model for Angelman Syndrome

Eva M. G. Viho, A. Mattijs Punt, Ben Distel, René Houtman, Jan Kroon, Ype Elgersma, Onno C. Meijer

Int J Mol Sci. 2023 Jan; 24(1): 303. Published online 2022 Dec 24. doi: 10.3390/ijms24010303

PMCID:: PMC9820460

Abstract Article PDF–3.4M

Select item 97696989.

A whole genome CRISPR screen identifies AHR loss as a mechanism of resistance to a PARP7 inhibitor

Huadong Chen, Morgan E. Diolaiti, Patrick C. O’Leary, Ajda Rojc, Nevan J. Krogan, Minkyu Kim, Alan Ashworth

Mol Cancer Ther. Author manuscript; available in PMC 2023 Jan 5.

Published in final edited form as: Mol Cancer Ther. 2022 Jul 5; 21(7): 1076–1089. doi: 10.1158/1535-7163.MCT-21-0841

PMCID:: PMC9769698

Abstract Article PDF–2.7M

Select item 949171310.

FBXO42 facilitates Notch signaling activation and global chromatin relaxation by promoting K63-linked polyubiquitination of RBPJ

Hua Jiang, Weixiang Bian, Yue Sui, Huanle Li, Han Zhao, Wenqi Wang, Xu Li

Sci Adv. 2022 Sep; 8(38): eabq4831. Published online 2022 Sep 21. doi: 10.1126/sciadv.abq4831

PMCID:: PMC9491713

Abstract Article PDF–12M

Select item 934647111.

TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2‐mediated degradation

Mi Chen, Shreyas Lingadahalli, Nitin Narwade, Kate Man Kei Lei, Shanshan Liu, Zuxianglan Zhao, Yimin Zheng, Qian Lu, Alexander Hin Ning Tang, Terence Chuen Wai Poon, Edwin Cheung

EMBO Rep. 2022 Aug; 23(8): e53468. Published online 2022 Jul 4. doi: 10.15252/embr.202153468

PMCID:: PMC9346471

Abstract Article PDF–5.2M

Select item 911973612.

OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization

Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti

Science. Author manuscript; available in PMC 2022 Sep 11.

Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983

PMCID:: PMC9119736

Abstract Article PDF–3.3M

Select item 911378613.

Obesity Due to Steroid Receptor Coactivator-1 Deficiency Is Associated With Endocrine and Metabolic Abnormalities

Tessa M Cacciottolo, Elana Henning, Julia M Keogh, Pierre Bel Lassen, Katherine Lawler, Rebecca Bounds, Rachel Ahmed, Aliki Perdikari, Edson Mendes de Oliveira, Miriam Smith, Edmund M Godfrey, Elspeth Johnson, Leanne Hodson, Karine Clément, Agatha A van der Klaauw, I Sadaf Farooqi

J Clin Endocrinol Metab. 2022 Jun; 107(6): e2532–e2544. Published online 2022 Feb 8. doi: 10.1210/clinem/dgac067

PMCID:: PMC9113786

Abstract Article

Select item 882889514.

Human transcription factor protein interaction networks

Helka Göös, Matias Kinnunen, Kari Salokas, Zenglai Tan, Xiaonan Liu, Leena Yadav, Qin Zhang, Gong-Hong Wei, Markku Varjosalo

Nat Commun. 2022; 13: 766. Published online 2022 Feb 9. doi: 10.1038/s41467-022-28341-5

PMCID:: PMC8828895

Abstract Article PDF–1.7M

Select item 841212615.

Ependymoma‐like tumor with mesenchymal differentiation harboring C11orf95‐NCOA1/2 or ‐RELA fusion: A hitherto unclassified tumor related to ependymoma

Ran Tomomasa, Yasuhito Arai, Reika Kawabata‐Iwakawa, Kohei Fukuoka, Yoshiko Nakano, Natsuko Hama, Satoshi Nakata, Nozomi Suzuki, Yukitomo Ishi, Shinya Tanaka, Jun A. Takahashi, Yoshiaki Yuba, Mitsutaka Shiota, Atsushi Natsume, Michihiro Kurimoto, Yoshiki Shiba, Mikiko Aoki, Kazuki Nabeshima, Toshiyuki Enomoto, Tooru Inoue, Junya Fujimura, Akihide Kondo, Takashi Yao, Naoki Okura, Takanori Hirose, Atsushi Sasaki, Masahiko Nishiyama, Koichi Ichimura, Tatsuhiro Shibata, Junko Hirato, Hideaki Yokoo, Sumihito Nobusawa

Brain Pathol. 2021 May; 31(3): e12943. Published online 2021 Feb 12. doi: 10.1111/bpa.12943

PMCID:: PMC8412126

Abstract Article PDF–2.9M

Select item 822039116.

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα

Evelyn Ramberger, Valeria Sapozhnikova, Elisabeth Kowenz-Leutz, Karin Zimmermann, Nathalie Nicot, Petr V. Nazarov, Daniel Perez-Hernandez, Ulf Reimer, Philipp Mertins, Gunnar Dittmar, Achim Leutz

iScience. 2021 Jun 25; 24(6): 102686. Published online 2021 Jun 4. doi: 10.1016/j.isci.2021.102686

PMCID:: PMC8220391

Abstract Article PDF–4.4M

Select item 820750417.

Recurrent MEIS1-NCOA2/1 Fusions in a Subset of Low-Grade Spindle Cell Sarcomas Frequently Involving the Genitourinary and Gynecologic Tracts

Yu-Chien Kao, Jennifer A. Bennett, Albert J. H. Suurmeijer, Brendan C. Dickson, David Swanson, Pankhuri Wanjari, Lei Zhang, Jen-Chieh Lee, Cristina R. Antonescu

Mod Pathol. Author manuscript; available in PMC 2021 Dec 1.

Published in final edited form as: Mod Pathol. 2021 Jun; 34(6): 1203–1212. Published online 2021 Feb 11. doi: 10.1038/s41379-021-00744-7

PMCID:: PMC8207504

Abstract Article PDF–3.5M

Select item 816503018.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 805077519.

Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner

Lauriane Vélot, Frédéric Lessard, Félix-Antoine Bérubé-Simard, Christophe Tav, Bertrand Neveu, Valentine Teyssier, Imène Boudaoud, Ugo Dionne, Noémie Lavoie, Steve Bilodeau, Frédéric Pouliot, Nicolas Bisson

Mol Cell Proteomics. 2021; 20: 100064. Published online 2021 Feb 26. doi: 10.1016/j.mcpro.2021.100064

PMCID:: PMC8050775

Abstract Article PDF–3.6M

Select item 789402320.

Steroid receptor coactivator‐1 enhances the stemness of glioblastoma by activating long noncoding RNA XIST/miR‐152/KLF4 pathway

Miaomiao Gong, Xun Wang, Lin Mu, Yueyue Wang, Jinjin Pan, Xiaocheng Yuan, Haoran Zhou, Jinshan Xing, Rui Wang, Jian Sun, Qiwang Liu, Xiya Zhang, Lin Wang, Yiying Chen, Yandong Pei, Shao Li, Liang Liu, Yongshun Zhao, Yuhui Yuan

Cancer Sci. 2021 Feb; 112(2): 604–618. Published online 2020 Dec 14. doi: 10.1111/cas.14685

Correction in:: Cancer Sci. 2024 Jan; 115(1): 324.

PMCID:: PMC7894023

Abstract Article PDF–2.9M

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TGFβ1 effect on HMEC-TR mammary epithelial cell line deficient in Smad4 or TIF1γ...
TGFβ1 effect on HMEC-TR mammary epithelial cell line deficient in Smad4 or TIF1γ
Accession: GDS4071

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Dendritic cell response to measles virus infection: time course
Dendritic cell response to measles virus infection: time course
Accession: GDS1681

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