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Items: 1 to 20 of 25

1.
Assessment of community efforts to advance network-based prediction of protein–protein interactions
Xu-Wen Wang, Lorenzo Madeddu, Kerstin Spirohn, Leonardo Martini, Adriano Fazzone, Luca Becchetti, Thomas P. Wytock, István A. Kovács, Olivér M. Balogh, Bettina Benczik, Mátyás Pétervári, Bence Ágg, Péter Ferdinandy, Loan Vulliard, Jörg Menche, Stefania Colonnese, Manuela Petti, Gaetano Scarano, Francesca Cuomo, Tong Hao, Florent Laval, Luc Willems, Jean-Claude Twizere, Marc Vidal, Michael A. Calderwood, Enrico Petrillo, Albert-László Barabási, Edwin K. Silverman, Joseph Loscalzo, Paola Velardi, Yang-Yu Liu
Nat Commun. 2023; 14: 1582. Published online 2023 Mar 22. doi: 10.1038/s41467-023-37079-7
PMCID:
PMC10033937
AbstractArticlePDF–1.5M
2.
Sclerosing Paragangliomas: Correlations of Histological Features with Patients’ Genotype and Vesicular Monoamine Transporter Expression
Angela Pucci, Alessandra Bacca, Ivana Barravecchia, Iosè Di Stefano, Beatrice Belgio, Daniele Lorenzini, Liborio Torregrossa, Serena Chiacchio, Caterina Congregati, Gabriele Materazzi, Mauro Ferrari, Debora Angeloni, Giampaolo Bernini, Fulvio Basolo
Head Neck Pathol. 2022 Dec; 16(4): 998–1011. Published online 2022 May 7. doi: 10.1007/s12105-022-01455-4
PMCID:
PMC9729524
AbstractArticlePDF–1.8M
3.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
4.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
5.
Human-specific mutations in VMAT1 confer functional changes and multi-directional evolution in the regulation of monoamine circuits
Daiki X. Sato, Yuu Ishii, Tomoaki Nagai, Kazumasa Ohashi, Masakado Kawata
BMC Evol Biol. 2019; 19: 220. Published online 2019 Dec 2. doi: 10.1186/s12862-019-1543-8
PMCID:
PMC6889191
AbstractArticlePDF–3.5M
6.
Dysmorphic contribution of neurotransmitter and neuroendocrine system polymorphisms to subtherapeutic mood states
Irene Gonzalez, Rocio Polvillo, Maximiliano Ruiz‐Galdon, Armando Reyes‐Engel, Jose Luis Royo
Brain Behav. 2019 Feb; 9(2): e01140. Published online 2019 Jan 17. doi: 10.1002/brb3.1140
PMCID:
PMC6379594
AbstractArticlePDF–550K
7.
Expression of the Vesicular Monoamine Transporter Gene Solute Carrier Family 18 Member 1 (SLC18A1) in Lung Cancer
STEVEN LEHRER, PETER H RHEINSTEIN
Cancer Genomics Proteomics. 2018 Sep-Oct; 15(5): 387–393. Published online 2018 Sep 3. doi: 10.21873/cgp.20097
PMCID:
PMC6199572
AbstractArticlePDF–321K
8.
Dopamine gene methylation patterns are associated with obesity markers and carbohydrate intake
Omar Ramos‐Lopez, Jose I. Riezu‐Boj, Fermin I. Milagro, J. Alfredo Martinez, MENA Project
Brain Behav. 2018 Aug; 8(8): e01017. Published online 2018 Jul 11. doi: 10.1002/brb3.1017
PMCID:
PMC6085894
AbstractArticlePDF–1022K
9.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
10.
A Functional Vesicular Monoamine Transporter 1 (VMAT1) Gene Variant Is Associated with Affect and the Prevalence of Anxiety, Affective, and Alcohol Use Disorders in a Longitudinal Population-Representative Birth Cohort Study
Mariliis Vaht, Evelyn Kiive, Toomas Veidebaum, Jaanus Harro
Int J Neuropsychopharmacol. 2016 Jul; 19(7): pyw013. Published online 2016 Feb 9. doi: 10.1093/ijnp/pyw013
PMCID:
PMC4966275
AbstractArticlePDF–982K
11.
Vesicular Monoamine Transporter Protein Expression Correlates with Clinical Features, Tumor Biology, and MIBG Avidity in Neuroblastoma: A Report from the Children's Oncology Group
William Temple, Lori Mendelsohn, Grace E. Kim, Erin Nekritz, W. Clay Gustafson, Lawrence Lin, Kathy Giacomini, Arlene Naranjo, Collin Van Ryn, Gregory A. Yanik, Susan G. Kreissman, Michael Hogarty, Katherine K. Matthay, Steven G. DuBois
Eur J Nucl Med Mol Imaging. Author manuscript; available in PMC 2017 Mar 1.
Published in final edited form as: Eur J Nucl Med Mol Imaging. 2016 Mar; 43(3): 474–481. Published online 2015 Sep 4. doi: 10.1007/s00259-015-3179-2
Correction in:
Eur J Nucl Med Mol Imaging. 2016 Jul; 43(7): 1396.
PMCID:
PMC4733400
AbstractArticlePDF–1.4M
12.
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2016 Jul 16.
Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043
PMCID:
PMC4617211
AbstractArticlePDF–2.2M
13.
Functional genetic variants in the vesicular monoamine transporter 1 (VMAT1) modulate emotion processing
Falk W. Lohoff, Rachel Hodge, Sneha Narasimhan, Aleksandra Nall, Thomas N. Ferraro, Brian J. Mickey, Mary M. Heitzeg, Scott A. Langenecker, Jon-Kar Zubieta, Ryan Bogdan, Yuliya S. Nikolova, Emily Drabant, Ahmad R. Hariri, Laura Bevilacqua, David Goldman, Glenn A. Doyle
Mol Psychiatry. Author manuscript; available in PMC 2015 Jan 30.
Published in final edited form as: Mol Psychiatry. 2014 Jan; 19(1): 129–139. Published online 2013 Jan 22. doi: 10.1038/mp.2012.193
PMCID:
PMC4311877
AbstractArticlePDF–1.0M
14.
Amerindian-specific regions under positive selection harbour new lipid variants in Latinos
Arthur Ko, Rita M. Cantor, Daphna Weissglas-Volkov, Elina Nikkola, Prasad M. V. Linga Reddy, Janet S. Sinsheimer, Bogdan Pasaniuc, Robert Brown, Marcus Alvarez, Alejandra Rodriguez, Rosario Rodriguez-Guillen, Ivette C. Bautista, Olimpia Arellano-Campos, Linda L. Muñoz-Hernández, Veikko Salomaa, Jaakko Kaprio, Antti Jula, Matti Jauhiainen, Markku Heliövaara, Olli Raitakari, Terho Lehtimäki, Johan G. Eriksson, Markus Perola, Kirk E. Lohmueller, Niina Matikainen, Marja-Riitta Taskinen, Maribel Rodriguez-Torres, Laura Riba, Teresa Tusie-Luna, Carlos A. Aguilar-Salinas, Päivi Pajukanta
Nat Commun. 2014 Jun 2; 5: 3983. Published online 2014 Jun 2. doi: 10.1038/ncomms4983
PMCID:
PMC4062071
AbstractArticlePDF–821K
15.
Genomic study in Mexicans identifies a new locus for triglycerides and refines European lipid loci
Daphna Weissglas-Volkov, Carlos A. Aguilar-Salinas, Elina Nikkola, Kerry A. Deere, Ivette Cruz-Bautista, Olimpia Arellano-Campos, Linda Liliana Muñoz-Hernandez, Lizeth Gomez-Munguia, Maria Luisa Ordoñez-Sánchez, Prasad MV Linga Reddy, Aldons J. Lusis, Niina Matikainen, Marja-Riitta Taskinen, Laura Riba, Rita M. Cantor, Janet S. Sinsheimer, Teresa Tusie-Luna, Päivi Pajukanta
J Med Genet. Author manuscript; available in PMC 2014 May 1.
Published in final edited form as: J Med Genet. 2013 May; 50(5): 298–308. Published online 2013 Mar 15. doi: 10.1136/jmedgenet-2012-101461
PMCID:
PMC3917605
AbstractArticlePDF–575K
16.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
17.
Pharmacogenetics of antipsychotic response in the CATIE trial: a candidate gene analysis
Anna C Need, Richard SE Keefe, Dongliang Ge, Iris Grossman, Sam Dickson, Joseph P McEvoy, David B Goldstein
Eur J Hum Genet. 2009 Jul; 17(7): 946–957. Published online 2009 Jan 21. doi: 10.1038/ejhg.2008.264
PMCID:
PMC2986499
AbstractArticlePDF–172K
18.
Association Study of 182 Candidate Genes in Anorexia Nervosa
Andrea Poyastro Pinheiro, Cynthia M. Bulik, Laura M. Thornton, Patrick F. Sullivan, Tammy L. Root, Cinnamon S. Bloss, Wade H. Berrettini, Nicholas J. Schork, Walter H. Kaye, Andrew W. Bergen, Pierre Magistretti, Harry Brandt, Steve Crawford, Scott Crow, Manfred M. Fichter, David Goldman, Katherine A. Halmi, Craig Johnson, Allan S. Kaplan, Pamela K. Keel, Kelly L. Klump, Maria La Via, James E. Mitchell, Michael Strober, Alessandro Rotondo, Janet Treasure, D. Blake Woodside
Am J Med Genet B Neuropsychiatr Genet. Author manuscript; available in PMC 2010 Oct 25.
Published in final edited form as: Am J Med Genet B Neuropsychiatr Genet. 2010 Jul; 153B(5): 1070–1080. doi: 10.1002/ajmg.b.31082
PMCID:
PMC2963154
AbstractArticlePDF–315K
19.
Novel loci for major depression identified by genome-wide association study of STAR*D and meta-analysis of three studies
SI Shyn, J Shi, JB Kraft, JB Potash, JA Knowles, MM Weissman, HA Garriock, JS Yokoyama, PJ McGrath, EJ Peters, WA Scheftner, W Coryell, WB Lawson, D Jancic, PV Gejman, AR Sanders, P Holmans, SL Slager, DF Levinson, SP Hamilton
Mol Psychiatry. Author manuscript; available in PMC 2011 Aug 1.
Published in final edited form as: Mol Psychiatry. 2011 Feb; 16(2): 202–215. Published online 2009 Dec 29. doi: 10.1038/mp.2009.125
PMCID:
PMC2888856
AbstractArticlePDF–1022K
20.
Genome-wide association analysis of metabolic traits in a birth cohort from a founder population
Chiara Sabatti, Susan K Service, Anna-Liisa Hartikainen, Anneli Pouta, Samuli Ripatti, Jae Brodsky, Chris G Jones, Noah A Zaitlen, Teppo Varilo, Marika Kaakinen, Ulla Sovio, Aimo Ruokonen, Jaana Laitinen, Eveliina Jakkula, Lachlan Coin, Clive Hoggart, Andrew Collins, Hannu Turunen, Stacey Gabriel, Paul Elliot, Mark I McCarthy, Mark J Daly, Marjo-Riitta Järvelin, Nelson B Freimer, Leena Peltonen
Nat Genet. Author manuscript; available in PMC 2009 Jul 1.
Published in final edited form as: Nat Genet. 2009 Jan; 41(1): 35–46. Published online 2008 Dec 7. doi: 10.1038/ng.271
PMCID:
PMC2687077
AbstractArticlePDF–1.3M

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