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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 108687272.

Adaptive preservation of orphan ribosomal proteins in chaperone-dispersed condensates

Asif Ali, Rania Garde, Olivia C. Schaffer, Jared A. M. Bard, Kabir Husain, Samantha Keyport Kik, Kathleen A. Davis, Sofia Luengo-Woods, Maya G. Igarashi, D. Allan Drummond, Allison H. Squires, David Pincus

Nat Cell Biol. Author manuscript; available in PMC 2024 Feb 15.

Published in final edited form as: Nat Cell Biol. 2023 Nov; 25(11): 1691–1703. Published online 2023 Oct 16. doi: 10.1038/s41556-023-01253-2

PMCID:: PMC10868727

Abstract Article PDF–7.0M

Select item 107988583.

Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking

Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan

J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047

PMCID:: PMC10798858

Abstract Article PDF–6.4M

Select item 107001384.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 102977005.

The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions

Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman

Mol Cell. Author manuscript; available in PMC 2024 Jun 15.

Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021

PMCID:: PMC10297700

Abstract Article PDF–2.0M

Select item 102922106.

Nuclear pore complexes mediate subtelomeric gene silencing by regulating PCNA levels on chromatin

Sanjeev Kumar Choudhry, Maxwell L. Neal, Song Li, Arti T. Navare, Trevor Van Eeuwen, Richard W. Wozniak, Fred D. Mast, Michael P. Rout, John D. Aitchison

J Cell Biol. 2023 Sep 4; 222(9): e202207060. Published online 2023 Jun 26. doi: 10.1083/jcb.202207060

PMCID:: PMC10292210

Abstract Article PDF–5.9M

Select item 92860237.

Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton

Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019

PMCID:: PMC9286023

Abstract Article

Select item 92098118.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 90079179.

Identification of 14-3-3 Proteins, Polo kinase, and RNA-binding protein Pes4 as Key Regulators of Meiotic Commitment in Budding Yeast

Janardan N. Gavade, Chris M. Puccia, S. Grace Herod, Jonathan C. Trinidad, Luke E. Berchowitz, Soni Lacefield

Curr Biol. Author manuscript; available in PMC 2023 Apr 11.

Published in final edited form as: Curr Biol. 2022 Apr 11; 32(7): 1534–1547.e9. Published online 2022 Mar 2. doi: 10.1016/j.cub.2022.02.022

PMCID:: PMC9007917

Abstract Article PDF–2.2M

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Rapid inactivation of the yeast Sec complex selectively blocks transport of post-translationally translocated proteins

Jae Kyo Yi, Hidenobu Fujita, Elisabet C. Mandon, Reid Gilmore

J Biol Chem. 2021 Oct; 297(4): 101171. Published online 2021 Sep 4. doi: 10.1016/j.jbc.2021.101171

PMCID:: PMC8503631

Abstract Article PDF–2.4M

Select item 840733911.

A CRISPR Interference Screen of Essential Genes Reveals that Proteasome Regulation Dictates Acetic Acid Tolerance in Saccharomyces cerevisiae

Vaskar Mukherjee, Ulrika Lind, Robert P. St. Onge, Anders Blomberg, Yvonne Nygård

mSystems. 2021 Jul-Aug; 6(4): e00418-21. Published online 2021 Jul 27. doi: 10.1128/mSystems.00418-21

PMCID:: PMC8407339

Abstract Article PDF–3.3M

Select item 823621112.

Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62

Samuel Itskanov, Katie M. Kuo, James C. Gumbart, Eunyong Park

Nat Struct Mol Biol. Author manuscript; available in PMC 2021 Jul 4.

Published in final edited form as: Nat Struct Mol Biol. 2021 Feb; 28(2): 162–172. Published online 2021 Jan 4. doi: 10.1038/s41594-020-00541-x

PMCID:: PMC8236211

Abstract Article PDF–9.8M

Select item 803178013.

How does Sec63 affect the conformation of Sec61 in yeast?

Pratiti Bhadra, Lalitha Yadhanapudi, Karin Römisch, Volkhard Helms

PLoS Comput Biol. 2021 Mar; 17(3): e1008855. Published online 2021 Mar 29. doi: 10.1371/journal.pcbi.1008855

PMCID:: PMC8031780

Abstract Article PDF–3.1M

Select item 784916514.

Architecture of the active post‐translational Sec translocon

Tsai‐Hsuan Weng, Wieland Steinchen, Birgitta Beatrix, Otto Berninghausen, Thomas Becker, Gert Bange, Jingdong Cheng, Roland Beckmann

EMBO J. 2021 Feb 1; 40(3): e105643. Published online 2020 Dec 11. doi: 10.15252/embj.2020105643

PMCID:: PMC7849165

Abstract Article PDF–1.7M

Select item 771875115.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 751933116.

Records of RNA locations in living yeast revealed through covalent marks

Hugo C. Medina-Munoz, Christopher P. Lapointe, Douglas F. Porter, Marvin Wickens

Proc Natl Acad Sci U S A. 2020 Sep 22; 117(38): 23539–23547. Published online 2020 Sep 9. doi: 10.1073/pnas.1921408117

PMCID:: PMC7519331

Abstract Article PDF–1.8M

Select item 676177217.

Asparagine-linked glycosylation is not directly coupled to protein translocation across the endoplasmic reticulum in Saccharomyces cerevisiae

Shiteshu Shrimal, Natalia A. Cherepanova, Elisabet C. Mandon, Sergey V. Venev, Reid Gilmore

Mol Biol Cell. 2019 Oct 1; 30(21): 2626–2638. doi: 10.1091/mbc.E19-06-0330

PMCID:: PMC6761772

Abstract Article PDF–1.5M

Select item 676025318.

Structure of the posttranslational Sec protein-translocation channel complex from yeast

Samuel Itskanov, Eunyong Park

Science. Author manuscript; available in PMC 2019 Sep 25.

Published in final edited form as: Science. 2019 Jan 4; 363(6422): 84–87. Published online 2018 Dec 13. doi: 10.1126/science.aav6740

PMCID:: PMC6760253

Abstract Article PDF–1.6M

Select item 636703519.

Structure of the post-translational protein translocation machinery of the ER membrane

Xudong Wu, Cerrone Cabanos, Tom A. Rapoport

Nature. Author manuscript; available in PMC 2019 Jun 30.

Published in final edited form as: Nature. 2019 Feb; 566(7742): 136–139. Published online 2018 Dec 31. doi: 10.1038/s41586-018-0856-x

PMCID:: PMC6367035

Abstract Article PDF–3.9M

Select item 634717020.

Effect of Sec61 interaction with Mpd1 on endoplasmic reticulum-associated degradation

Fabio Pereira, Mandy Rettel, Frank Stein, Mikhail M. Savitski, Ian Collinson, Karin Römisch

PLoS One. 2019; 14(1): e0211180. Published online 2019 Jan 25. doi: 10.1371/journal.pone.0211180

PMCID:: PMC6347170

Abstract Article PDF–16M

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