PMC Links for GEO Profiles (Select 27121505) - PMC

Select item 109332671.

Interaction network of human early embryonic transcription factors

Lisa Gawriyski, Zenglai Tan, Xiaonan Liu, Iftekhar Chowdhury, Dicle Malaymar Pinar, Qin Zhang, Jere Weltner, Eeva-Mari Jouhilahti, Gong-Hong Wei, Juha Kere, Markku Varjosalo

EMBO Rep. 2024 Mar; 25(3): 1589–1622. Published online 2024 Jan 31. doi: 10.1038/s44319-024-00074-0

PMCID:: PMC10933267

Abstract Article PDF–2.9M

Select item 81650302.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 80090483.

Impact of cytosine methylation on DNA binding specificities of human transcription factors

Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush K. Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, Alexander Popov, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale

Science. Author manuscript; available in PMC 2021 Mar 30.

Published in final edited form as: Science. 2017 May 5; 356(6337): eaaj2239. doi: 10.1126/science.aaj2239

PMCID:: PMC8009048

Abstract Article PDF–2.6M

Select item 66203854.

USP21 modulates Goosecoid function through deubiquitination

Fuwei Liu, Qian Fu, Yunpeng Li, Kai Zhang, Mingyue Tang, Wei Jiang, Bin Bo, Yajun Cui, Liang Kong

Biosci Rep. 2019 Jul 31; 39(7): BSR20182148. Prepublished online 2019 Jun 28. Published online 2019 Jul 10. doi: 10.1042/BSR20182148

PMCID:: PMC6620385

Abstract Article PDF–1.4M

Select item 55316115.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 51208726.

DIGIT is a conserved long noncoding RNA that regulates GSC expression to control definitive endoderm differentiation of embryonic stem cells

Kaveh Daneshvar, Joshua V. Pondick, Byeong-Moo Kim, Chan Zhou, Samuel R. York, Jillian A. Macklin, Ameed Abualteen, Bo Tan, Alla A. Sigova, Chelsea Marcho, Kimberly D. Tremblay, Jesse Mager, Michael Choi, Alan C. Mullen

Cell Rep. Author manuscript; available in PMC 2016 Nov 23.

Published in final edited form as: Cell Rep. 2016 Oct 4; 17(2): 353–365. doi: 10.1016/j.celrep.2016.09.017

PMCID:: PMC5120872

Abstract Article PDF–1.3M

Select item 50237647.

Mutational Analysis of TCOF1, GSC, and HOXA2 in Patients With Treacher Collins Syndrome

Shaojuan Hao, Lei Jin, Huijun Wang, Chenlong Li, Fengyun Zheng, Duan Ma, Tianyu Zhang

J Craniofac Surg. 2016 Sep; 27(6): e583–e586. Published online 2016 Aug 12. doi: 10.1097/SCS.0000000000002934

PMCID:: PMC5023764

Abstract Article PDF–281K

Select item 42087428.

Goosecoid Promotes the Metastasis of Hepatocellular Carcinoma by Modulating the Epithelial-Mesenchymal Transition

Tong-Chun Xue, Ning-Ling Ge, Lan Zhang, Jie-Feng Cui, Rong-Xin Chen, Yang You, Sheng-Long Ye, Zheng-Gang Ren

PLoS One. 2014; 9(10): e109695. Published online 2014 Oct 24. doi: 10.1371/journal.pone.0109695

PMCID:: PMC4208742

Abstract Article PDF–9.3M

Select item 38531329.

SAMS, a Syndrome of Short Stature, Auditory-Canal Atresia, Mandibular Hypoplasia, and Skeletal Abnormalities Is a Unique Neurocristopathy Caused by Mutations in Goosecoid

David A. Parry, Clare V. Logan, Alexander P.A. Stegmann, Zakia A. Abdelhamed, Alistair Calder, Shabana Khan, David T. Bonthron, Virginia Clowes, Eamonn Sheridan, Neeti Ghali, Albert E. Chudley, Angus Dobbie, Constance T.R.M. Stumpel, Colin A. Johnson

Am J Hum Genet. 2013 Dec 5; 93(6): 1135–1142. doi: 10.1016/j.ajhg.2013.10.027

PMCID:: PMC3853132

Abstract Article PDF–1.5M

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 304466911.

Evaluation of four novel genetic variants affecting hemoglobin A1c levels in a population-based type 2 diabetes cohort (the HUNT2 study)

Jens K Hertel, Stefan Johansson, Helge Ræder, Carl GP Platou, Kristian Midthjell, Kristian Hveem, Anders Molven, Pål R Njølstad

BMC Med Genet. 2011; 12: 20. Published online 2011 Feb 4. doi: 10.1186/1471-2350-12-20

PMCID:: PMC3044669

Abstract Article PDF–293K

Select item 280996012.

A Genome-Wide Association Study Identifies a Novel Major Locus for Glycemic Control in Type 1 Diabetes, as Measured by Both A1C and Glucose

Andrew D. Paterson, Daryl Waggott, Andrew P. Boright, S. Mohsen Hosseini, Enqing Shen, Marie-Pierre Sylvestre, Isidro Wong, Bhupinder Bharaj, Patricia A. Cleary, John M. Lachin, MAGIC (Meta-Analyses of Glucose and Insulin-related traits Consortium), Jennifer E. Below, Dan Nicolae, Nancy J. Cox, Angelo J. Canty, Lei Sun, Shelley B. Bull, the Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Research Group

Diabetes. 2010 Feb; 59(2): 539–549. Published online 2009 Oct 20. doi: 10.2337/db09-0653