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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 102350863.

Rio1 downregulates centromeric RNA levels to promote the timely assembly of structurally fit kinetochores

Ksenia Smurova, Michela Damizia, Carmela Irene, Stefania Stancari, Giovanna Berto, Giulia Perticari, Maria Giuseppina Iacovella, Ilaria D’Ambrosio, Maria Giubettini, Réginald Philippe, Chiara Baggio, Elisabetta Callegaro, Andrea Casagranda, Alessandro Corsini, Vincenzo Gentile Polese, Anna Ricci, Erik Dassi, Peter De Wulf

Nat Commun. 2023; 14: 3172. Published online 2023 Jun 1. doi: 10.1038/s41467-023-38920-9

PMCID:: PMC10235086

Abstract Article PDF–2.6M

Select item 101488204.

Positive feedback induces switch between distributive and processive phosphorylation of Hog1

Maximilian Mosbacher, Sung Sik Lee, Gilad Yaakov, Mariona Nadal-Ribelles, Eulàlia de Nadal, Frank van Drogen, Francesc Posas, Matthias Peter, Manfred Claassen

Nat Commun. 2023; 14: 2477. Published online 2023 Apr 29. doi: 10.1038/s41467-023-37430-y

PMCID:: PMC10148820

Abstract Article PDF–1.8M

Select item 92098115.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 84212046.

Investigation of RNA metabolism through large-scale genetic interaction profiling in yeast

Laurence Decourty, Christophe Malabat, Emmanuel Frachon, Alain Jacquier, Cosmin Saveanu

Nucleic Acids Res. 2021 Sep 7; 49(15): 8535–8555. Published online 2021 Aug 6. doi: 10.1093/nar/gkab680

PMCID:: PMC8421204

Abstract Article PDF–2.9M

Select item 83996257.

Clotrimazole-Induced Oxidative Stress Triggers Novel Yeast Pkc1-Independent Cell Wall Integrity MAPK Pathway Circuitry

Ángela Sellers-Moya, Marcos Nuévalos, María Molina, Humberto Martín

J Fungi (Basel) 2021 Aug; 7(8): 647. Published online 2021 Aug 9. doi: 10.3390/jof7080647

PMCID:: PMC8399625

Abstract Article PDF–3.3M

Select item 83535238.

Spatiotemporal control of pathway sensors and cross-pathway feedback regulate a differentiation MAPK pathway in yeast

Aditi Prabhakar, Beatriz González, Heather Dionne, Sukanya Basu, Paul J. Cullen

J Cell Sci. 2021 Aug 1; 134(15): jcs258341. Published online 2021 Aug 4. doi: 10.1242/jcs.258341

PMCID:: PMC8353523

Abstract Article

Select item 82264679.

Roles of High Osmolarity Glycerol and Cell Wall Integrity Pathways in Cadmium Toxicity in Saccharomyces cerevisiae

Yunying Zhao, Shiyun Li, Jing Wang, Yingli Liu, Yu Deng

Int J Mol Sci. 2021 Jun; 22(12): 6169. Published online 2021 Jun 8. doi: 10.3390/ijms22126169

PMCID:: PMC8226467

Abstract Article PDF–3.3M

Select item 787948210.

Analysis of the TORC1 interactome reveals a spatially distinct function of TORC1 in mRNP complexes

Yeonji Chang, Gyubum Lim, Won-Ki Huh

J Cell Biol. 2021 Apr 5; 220(4): e201912060. Published online 2021 Feb 10. doi: 10.1083/jcb.201912060

PMCID:: PMC7879482

Abstract Article PDF–5.9M

Select item 787448211.

CRISPRi screens reveal genes modulating yeast growth in lignocellulose hydrolysate

Friederike Gutmann, Cosimo Jann, Filipa Pereira, Andreas Johansson, Lars M. Steinmetz, Kiran R. Patil

Biotechnol Biofuels. 2021; 14: 41. Published online 2021 Feb 10. doi: 10.1186/s13068-021-01880-7

PMCID:: PMC7874482

Abstract Article PDF–3.2M

Select item 766773812.

Protein kinase A controls yeast growth in visible light

Mikael Molin, Katarina Logg, Kristofer Bodvard, Ken Peeters, Annabelle Forsmark, Friederike Roger, Anna Jörhov, Neha Mishra, Jean-Marc Billod, Sabiha Amir, Mikael Andersson, Leif A. Eriksson, Jonas Warringer, Mikael Käll, Anders Blomberg

BMC Biol. 2020; 18: 168. Published online 2020 Nov 16. doi: 10.1186/s12915-020-00867-4

PMCID:: PMC7667738

Abstract Article PDF–2.3M

Select item 756021613.

AP‐3 vesicle uncoating occurs after HOPS‐dependent vacuole tethering

Jannis Schoppe, Muriel Mari, Erdal Yavavli, Kathrin Auffarth, Margarita Cabrera, Stefan Walter, Florian Fröhlich, Christian Ungermann

EMBO J. 2020 Oct 15; 39(20): e105117. Published online 2020 Aug 25. doi: 10.15252/embj.2020105117

PMCID:: PMC7560216

Abstract Article PDF–3.6M

Select item 750740214.

Systematic analysis of bypass suppression of essential genes

Jolanda van Leeuwen, Carles Pons, Guihong Tan, Jason Zi Wang, Jing Hou, Jochen Weile, Marinella Gebbia, Wendy Liang, Ermira Shuteriqi, Zhijian Li, Maykel Lopes, Matej Ušaj, Andreia Dos Santos Lopes, Natascha van Lieshout, Chad L Myers, Frederick P Roth, Patrick Aloy, Brenda J Andrews, Charles Boone

Mol Syst Biol. 2020 Sep; 16(9): e9828. Published online 2020 Sep 17. doi: 10.15252/msb.20209828

PMCID:: PMC7507402

Abstract Article PDF–1.8M

Select item 717484615.

Regulation of intrinsic polarity establishment by a differentiation-type MAPK pathway in S. cerevisiae

Aditi Prabhakar, Jacky Chow, Alan J. Siegel, Paul J. Cullen

J Cell Sci. 2020 Apr 1; 133(7): jcs241513. Published online 2020 Apr 14. doi: 10.1242/jcs.241513

PMCID:: PMC7174846

Abstract Article

Select item 706580516.

Multi-kinase control of environmental stress responsive transcription

Kieran Mace, Joanna Krakowiak, Hana El-Samad, David Pincus

PLoS One. 2020; 15(3): e0230246. Published online 2020 Mar 11. doi: 10.1371/journal.pone.0230246

PMCID:: PMC7065805

Abstract Article PDF–4.4M

Select item 704981417.

Osmostress enhances activating phosphorylation of Hog1 MAP kinase by mono‐phosphorylated Pbs2 MAP2K

Kazuo Tatebayashi, Katsuyoshi Yamamoto, Taichiro Tomida, Akiko Nishimura, Tomomi Takayama, Masaaki Oyama, Hiroko Kozuka‐Hata, Satomi Adachi‐Akahane, Yuji Tokunaga, Haruo Saito

EMBO J. 2020 Mar 2; 39(5): e103444. Published online 2020 Feb 3. doi: 10.15252/embj.2019103444

PMCID:: PMC7049814

Abstract Article PDF–2.7M

Select item 667894518.

Tunicamycin Sensitivity-Suppression by High Gene Dosage Reveals New Functions of the Yeast Hog1 MAP Kinase

Mariana Hernández-Elvira, Ricardo Martínez-Gómez, Eunice Domínguez-Martin, Akram Méndez, Laura Kawasaki, Laura Ongay-Larios, Roberto Coria

Cells. 2019 Jul; 8(7): 710. Published online 2019 Jul 12. doi: 10.3390/cells8070710

PMCID:: PMC6678945

Abstract Article PDF–7.7M

Select item 621571319.

Systematic Analysis of Complex Genetic Interactions

Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers

Science. Author manuscript; available in PMC 2018 Nov 4.

Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729

PMCID:: PMC6215713

Abstract Article PDF–1.9M

Select item 616255920.

Impact of Fungal MAPK Pathway Targets on the Cell Wall

Jacky Chow, Marysa Notaro, Aditi Prabhakar, Stephen J. Free, Paul J. Cullen

J Fungi (Basel) 2018 Sep; 4(3): 93. Published online 2018 Aug 9. doi: 10.3390/jof4030093

PMCID:: PMC6162559

Abstract Article PDF–5.5M

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PMC Links for GEO Profiles (Select 30552143) (122)
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OMIM Links for Protein (Select 6754838) (5)
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phenylalanine--tRNA ligase beta subunit isoform 5 [Mus musculus]
phenylalanine--tRNA ligase beta subunit isoform 5 [Mus musculus]
gi|2507456612|ref|NP_001408311.1|

Protein
Mus musculus phenylalanyl-tRNA synthetase, beta subunit (Farsb), transcript vari...
Mus musculus phenylalanyl-tRNA synthetase, beta subunit (Farsb), transcript variant 5, mRNA
gi|2507456452|ref|NM_001421378.1|

Nucleotide

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