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Select item 102841171.

Exploring an Alternative Cysteine-Reactive Chemistry to Enable Proteome-Wide PPI Analysis by Cross-Linking Mass Spectrometry

Fenglong Jiao, Leah J. Salituro, Clinton Yu, Craig B. Gutierrez, Scott D. Rychnovsky, Lan Huang

Anal Chem. Author manuscript; available in PMC 2023 Jun 21.

Published in final edited form as: Anal Chem. 2023 Jan 31; 95(4): 2532–2539. Published online 2023 Jan 18. doi: 10.1021/acs.analchem.2c04986

PMCID:: PMC10284117

Abstract Article PDF–2.5M

Select item 102374222.

TRIM67 drives tumorigenesis in oligodendrogliomas through Rho GTPase-dependent membrane blebbing

Engin Demirdizen, Ruslan Al-Ali, Ashwin Narayanan, Xueyuan Sun, Julianna Patricia Varga, Bianca Steffl, Manuela Brom, Damir Krunic, Claudia Schmidt, Gabriele Schmidt, Felix Bestvater, Julian Taranda, Şevin Turcan

Neuro Oncol. 2023 Jun; 25(6): 1031–1043. Published online 2022 Nov 22. doi: 10.1093/neuonc/noac233

PMCID:: PMC10237422

Abstract Article PDF–23M

Select item 93485763.

Chr21 protein–protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer’s disease

Julia Viard, Yann Loe-Mie, Rachel Daudin, Malik Khelfaoui, Christine Plancon, Anne Boland, Francisco Tejedor, Richard L Huganir, Eunjoon Kim, Makoto Kinoshita, Guofa Liu, Volker Haucke, Thomas Moncion, Eugene Yu, Valérie Hindie, Henri Bléhaut, Clotilde Mircher, Yann Herault, Jean-François Deleuze, Jean-Christophe Rain, Michel Simonneau, Aude-Marie Lepagnol-Bestel

Life Sci Alliance. 2022 Dec; 5(12): e202101205. Published online 2022 Aug 1. doi: 10.26508/lsa.202101205

PMCID:: PMC9348576

Abstract Article PDF–3.0M

Select item 85351754.

Bioinformatics analysis identifies DYNC1I1 as prognosis marker in male patients with liver hepatocellular carcinoma

Jian Zhou, Yue Zhu, Songlin Ma, Yi Li, Kun Liu, Sihuan Xu, Xin Li, Li Li, Junfang Hu, Yan Liu

PLoS One. 2021; 16(10): e0258797. Published online 2021 Oct 22. doi: 10.1371/journal.pone.0258797

PMCID:: PMC8535175

Abstract Article PDF–2.8M

Select item 82666175.

Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins

Benjamin Lang, Jae-Seong Yang, Mireia Garriga-Canut, Silvia Speroni, Moritz Aschern, Maria Gili, Tobias Hoffmann, Gian Gaetano Tartaglia, Sebastian P Maurer

Nucleic Acids Res. 2021 Jul 9; 49(12): 6702–6721. Published online 2021 Jun 16. doi: 10.1093/nar/gkab490

PMCID:: PMC8266617

Abstract Article PDF–4.0M

Select item 81650306.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 69277447.

Sequential phosphorylation of NDEL1 by the DYRK2-GSK3β complex is critical for neuronal morphogenesis

Youngsik Woo, Soo Jeong Kim, Bo Kyoung Suh, Yongdo Kwak, Hyun-Jin Jung, Truong Thi My Nhung, Dong Jin Mun, Ji-Ho Hong, Su-Jin Noh, Seunghyun Kim, Ahryoung Lee, Seung Tae Baek, Minh Dang Nguyen, Youngshik Choe, Sang Ki Park

eLife. 2019; 8: e50850. Published online 2019 Dec 9. doi: 10.7554/eLife.50850

PMCID:: PMC6927744

Abstract Article PDF–4.8M

Select item 68858708.

TNPO2 operates downstream of DYNC1I1 and promotes gastric cancer cell proliferation and inhibits apoptosis

Libao Gong, Ti Wen, Zhi Li, Yizhe Wang, Jin Wang, Xiaofang Che, Yunpeng Liu, Xiujuan Qu

Cancer Med. 2019 Dec; 8(17): 7299–7312. Published online 2019 Oct 11. doi: 10.1002/cam4.2582

PMCID:: PMC6885870

Abstract Article PDF–2.1M

Select item 63636479.

Cytoplasmic dynein regulates the subcellular localization of sphingosine kinase 2 to elicit tumor-suppressive functions in glioblastoma

Heidi A. Neubauer, Melinda N. Tea, Julia R. Zebol, Briony L. Gliddon, Cassandra Stefanidis, Paul A. B. Moretti, Melissa R. Pitman, Maurizio Costabile, Jasreen Kular, Brett W. Stringer, Bryan W. Day, Michael S. Samuel, Claudine S. Bonder, Jason A. Powell, Stuart M. Pitson

Oncogene. 2019; 38(8): 1151–1165. Published online 2018 Sep 24. doi: 10.1038/s41388-018-0504-9

PMCID:: PMC6363647

Abstract Article PDF–2.9M

Select item 616668210.

Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei

Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck

Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924

PMCID:: PMC6166682

Abstract Article PDF–3.8M

Select item 553358511.

The human cytoplasmic dynein interactome reveals novel activators of motility

William B Redwine, Morgan E DeSantis, Ian Hollyer, Zaw Min Htet, Phuoc Tien Tran, Selene K Swanson, Laurence Florens, Michael P Washburn, Samara L Reck-Peterson

eLife. 2017; 6: e28257. Published online 2017 Jul 18. doi: 10.7554/eLife.28257

PMCID:: PMC5533585

Abstract Article PDF–5.9M

Select item 553161112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 489366413.

MCRS1 associates with cytoplasmic dynein and mediates pericentrosomal material recruitment

Si-Hyung Lee, Mi-Sun Lee, Tae-Ik Choi, Hyowon Hong, Jun-Young Seo, Cheol-Hee Kim, Joon Kim

Sci Rep. 2016; 6: 27284. Published online 2016 Jun 6. doi: 10.1038/srep27284

PMCID:: PMC4893664

Abstract Article PDF–1.3M

Select item 438023314.

HIV-1 capsids bind and exploit the kinesin-1 adaptor FEZ1 for inward movement to the nucleus

Viacheslav Malikov, Eveline Santos da Silva, Vladimir Jovasevic, Geoffrey Bennett, Daniel A. de Souza Aranha Vieira, Bianca Schulte, Felipe Diaz-Griffero, Derek Walsh, Mojgan H. Naghavi

Nat Commun. Author manuscript; available in PMC 2015 Sep 30.

Published in final edited form as: Nat Commun. 2015; 6: 6660. Published online 2015 Mar 30. doi: 10.1038/ncomms7660

PMCID:: PMC4380233

Abstract Article PDF–1.5M

Select item 432574815.

Circovirus Transport Proceeds via Direct Interaction of the Cytoplasmic Dynein IC1 Subunit with the Viral Capsid Protein

Jingjing Cao, Cui Lin, Huijuan Wang, Lun Wang, Niu Zhou, Yulan Jin, Min Liao, Jiyong Zhou

J Virol. 2015 Mar 1; 89(5): 2777–2791. Published online 2014 Dec 24. doi: 10.1128/JVI.03117-14

PMCID:: PMC4325748

Abstract Article PDF–3.6M

Select item 424898216.

HIV-1 Uncoating Is Facilitated by Dynein and Kinesin 1

Zana Lukic, Adarsh Dharan, Thomas Fricke, Felipe Diaz-Griffero, Edward M. Campbell

J Virol. 2014 Dec; 88(23): 13613–13625. doi: 10.1128/JVI.02219-14

PMCID:: PMC4248982

Abstract Article PDF–2.9M

Select item 423794717.

Deletions of exons with regulatory activity at the DYNC1I1 locus are associated with split-hand/split-foot malformation: array CGH screening of 134 unrelated families

Naeimeh Tayebi, Aleksander Jamsheer, Ricarda Flöttmann, Anna Sowinska-Seidler, Sandra C Doelken, Barbara Oehl-Jaschkowitz, Wiebke Hülsemann, Rolf Habenicht, Eva Klopocki, Stefan Mundlos, Malte Spielmann

Orphanet J Rare Dis. 2014; 9: 108. Published online 2014 Jul 29. doi: 10.1186/s13023-014-0108-6

PMCID:: PMC4237947

Abstract Article PDF–1.1M

Select item 420334118.

Trim58 degrades dynein and regulates terminal erythropoiesis

Christopher S Thom, Elizabeth A Traxler, Eugene Khandros, Jenna M Nickas, Olivia Y Zhou, Jacob E Lazarus, Ana PG Silva, Dolly Prabhu, Yu Yao, Chiaka Aribeana, Serge Y Fuchs, Joel P Mackay, Erika LF Holzbaur, Mitchell J Weiss

Dev Cell. Author manuscript; available in PMC 2015 Sep 29.

Published in final edited form as: Dev Cell. 2014 Sep 29; 30(6): 688–700. Published online 2014 Sep 18. doi: 10.1016/j.devcel.2014.07.021

PMCID:: PMC4203341

Abstract Article PDF–1.9M

Select item 417058519.

Genome-Wide Analysis of Polymorphisms Associated with Cytokine Responses in Smallpox Vaccine Recipients

Richard B. Kennedy, Inna G. Ovsyannikova, V. Shane Pankratz, Iana H. Haralambieva, Robert A. Vierkant, Gregory A. Poland

Hum Genet. Author manuscript; available in PMC 2014 Sep 22.

Published in final edited form as: Hum Genet. 2012 Sep; 131(9): 1403–1421. Published online 2012 May 19. doi: 10.1007/s00439-012-1174-2

PMCID:: PMC4170585

Abstract Article PDF–594K

Select item 416364720.

Interaction of SQSTM1 with the motor protein dynein – SQSTM1 is required for normal dynein function and trafficking

Luis Calderilla-Barbosa, M. Lamar Seibenhener, Yifeng Du, Maria-Theresa Diaz-Meco, Jorge Moscat, Jin Yan, Marie W. Wooten, Michael C. Wooten

J Cell Sci. 2014 Sep 15; 127(18): 4052–4063. doi: 10.1242/jcs.152363

PMCID:: PMC4163647

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