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Items: 1 to 20 of 77

1.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
2.
eIF2A represses cell wall biogenesis gene expression in Saccharomyces cerevisiae
Laura Meyer, Baptiste Courtin, Maïté Gomard, Abdelkader Namane, Emmanuelle Permal, Gwenael Badis, Alain Jacquier, Micheline Fromont-Racine
PLoS One. 2023; 18(11): e0293228. Published online 2023 Nov 27. doi: 10.1371/journal.pone.0293228
PMCID:
PMC10681259
AbstractArticlePDF–2.5M
3.
A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast
Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger
G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296
PMCID:
PMC9836348
AbstractArticlePDF–857K
4.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
5.
Spatiotemporal control of pathway sensors and cross-pathway feedback regulate a differentiation MAPK pathway in yeast
Aditi Prabhakar, Beatriz González, Heather Dionne, Sukanya Basu, Paul J. Cullen
J Cell Sci. 2021 Aug 1; 134(15): jcs258341. Published online 2021 Aug 4. doi: 10.1242/jcs.258341
PMCID:
PMC8353523
AbstractArticle
6.
Activation of a Mitogen-Activated Protein Kinase Hog1 by DNA Damaging Agent Methyl Methanesulfonate in Yeast
Shan Huang, David Zhang, Fangli Weng, Yuqi Wang
Front Mol Biosci. 2020; 7: 581095. Published online 2020 Dec 11. doi: 10.3389/fmolb.2020.581095
PMCID:
PMC7793754
AbstractArticlePDF–823K
7.
Functions for Cdc42p BEM adaptors in regulating a differentiation-type MAP kinase pathway
Sukanya Basu, Beatriz González, Boyang Li, Garrett Kimble, Keith G. Kozminski, Paul J. Cullen
Mol Biol Cell. 2020 Mar 15; 31(6): 491–510. doi: 10.1091/mbc.E19-08-0441
PMCID:
PMC7185891
AbstractArticlePDF–2.1M
8.
Regulation of intrinsic polarity establishment by a differentiation-type MAPK pathway in S. cerevisiae
Aditi Prabhakar, Jacky Chow, Alan J. Siegel, Paul J. Cullen
J Cell Sci. 2020 Apr 1; 133(7): jcs241513. Published online 2020 Apr 14. doi: 10.1242/jcs.241513
PMCID:
PMC7174846
AbstractArticle
9.
Coordination of the Cell Wall Integrity and High-Osmolarity Glycerol Pathways in Response to Ethanol Stress in Saccharomyces cerevisiae
Nisarut Udom, Pakkanan Chansongkrow, Varodom Charoensawan, Choowong Auesukaree
Appl Environ Microbiol. 2019 Aug 1; 85(15): e00551-19. Prepublished online 2019 May 17. Published online 2019 Jul 18. doi: 10.1128/AEM.00551-19
PMCID:
PMC6643247
AbstractArticlePDF–2.6M
10.
Signalling through the yeast MAPK Cell Wall Integrity pathway controls P-body assembly upon cell wall stress
Raúl García, Verónica Pulido, Sara Orellana-Muñoz, César Nombela, Carlos R. Vázquez de Aldana, José M. Rodríguez-Peña, Javier Arroyo
Sci Rep. 2019; 9: 3186. Published online 2019 Feb 28. doi: 10.1038/s41598-019-40112-9
Correction in:
Sci Rep. 2019; 9: 16650.
PMCID:
PMC6395727
AbstractArticlePDF–5.8M
11.
Interaction between the transmembrane domains of Sho1 and Opy2 enhances the signaling efficiency of the Hog1 MAP kinase cascade in Saccharomyces cerevisiae
Tomomi Takayama, Katsuyoshi Yamamoto, Haruo Saito, Kazuo Tatebayashi
PLoS One. 2019; 14(1): e0211380. Published online 2019 Jan 25. doi: 10.1371/journal.pone.0211380
PMCID:
PMC6347418
AbstractArticlePDF–2.1M
12.
Systematic Analysis of Complex Genetic Interactions
Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers
Science. Author manuscript; available in PMC 2018 Nov 4.
Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729
PMCID:
PMC6215713
AbstractArticlePDF–1.9M
13.
Heat-stress triggers MAPK crosstalk to turn on the hyperosmotic response pathway
Paula Dunayevich, Rodrigo Baltanás, José Antonio Clemente, Alicia Couto, Daiana Sapochnik, Gustavo Vasen, Alejandro Colman-Lerner
Sci Rep. 2018; 8: 15168. Published online 2018 Oct 11. doi: 10.1038/s41598-018-33203-6
PMCID:
PMC6181916
AbstractArticlePDF–5.1M
14.
Intracellular mechanism by which arsenite activates the yeast stress MAPK Hog1
Jongmin Lee, David E. Levin
Mol Biol Cell. 2018 Aug 1; 29(15): 1904–1915. doi: 10.1091/mbc.E18-03-0185
PMCID:
PMC6085820
AbstractArticlePDF–1.2M
15.
Identifying Protein Kinase–Specific Effectors of the Osmostress Response in Yeast
Natalie Romanov, David Maria Hollenstein, Marion Janschitz, Gustav Ammerer, Dorothea Anrather, Wolfgang Reiter
Sci Signal. Author manuscript; available in PMC 2018 Jul 17.
Published in final edited form as: Sci Signal. 2017 Mar 7; 10(469): eaag2435. Published online 2017 Mar 7. doi: 10.1126/scisignal.aag2435
PMCID:
PMC6049618
AbstractArticlePDF–2.7M
16.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
17.
SCWISh network is essential for survival under mechanical pressure
Morgan Delarue, Gregory Poterewicz, Ori Hoxha, Jessica Choi, Wonjung Yoo, Jona Kayser, Liam Holt, Oskar Hallatschek
Proc Natl Acad Sci U S A. 2017 Dec 19; 114(51): 13465–13470. Published online 2017 Nov 29. doi: 10.1073/pnas.1711204114
PMCID:
PMC5754774
AbstractArticlePDF–1.1M
18.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
19.
Architecture and dynamics of overlapped RNA regulatory networks
Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens
RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117
PMCID:
PMC5648032
AbstractArticlePDF–6.6M
20.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M

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