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Items: 1 to 20 of 97

1.
MYOD-SKP2 axis boosts tumorigenesis in fusion negative rhabdomyosarcoma by preventing differentiation through p57Kip2 targeting
Silvia Pomella, Matteo Cassandri, Lucrezia D’Archivio, Antonella Porrazzo, Cristina Cossetti, Doris Phelps, Clara Perrone, Michele Pezzella, Antonella Cardinale, Marco Wachtel, Sara Aloisi, David Milewski, Marta Colletti, Prethish Sreenivas, Zoë S. Walters, Giovanni Barillari, Angela Di Giannatale, Giuseppe Maria Milano, Cristiano De Stefanis, Rita Alaggio, Sonia Rodriguez-Rodriguez, Nadia Carlesso, Christopher R. Vakoc, Enrico Velardi, Beat W. Schafer, Ernesto Guccione, Susanne A. Gatz, Ajla Wasti, Marielle Yohe, Myron Ignatius, Concetta Quintarelli, Janet Shipley, Lucio Miele, Javed Khan, Peter J. Houghton, Francesco Marampon, Berkley E. Gryder, Biagio De Angelis, Franco Locatelli, Rossella Rota
Nat Commun. 2023; 14: 8373. Published online 2023 Dec 15. doi: 10.1038/s41467-023-44130-0
PMCID:
PMC10724275
AbstractArticlePDF–8.9M
2.
MYOD1 as a prognostic indicator in rhabdomyosarcoma
Atif A. Ahmed, Sultan Habeebu, Midhat S. Farooqi, Alan S. Gamis, Elizabeth Gonzalez, Terrie Flatt, Ashley Sherman, Lea Surrey, Michael A. Arnold, Miriam Conces, Selene Koo, Nikolina Dioufa, Frederic G. Barr, Maria G. Tsokos
Pediatr Blood Cancer. Author manuscript; available in PMC 2023 Feb 8.
Published in final edited form as: Pediatr Blood Cancer. 2021 Sep; 68(9): e29085. Published online 2021 Apr 29. doi: 10.1002/pbc.29085
PMCID:
PMC9907363
AbstractArticlePDF–1.2M
3.
Human transcription factor protein interaction networks
Helka Göös, Matias Kinnunen, Kari Salokas, Zenglai Tan, Xiaonan Liu, Leena Yadav, Qin Zhang, Gong-Hong Wei, Markku Varjosalo
Nat Commun. 2022; 13: 766. Published online 2022 Feb 9. doi: 10.1038/s41467-022-28341-5
PMCID:
PMC8828895
AbstractArticlePDF–1.7M
4.
Functional impact and targetability of PI3KCA, GNAS, and PTEN mutations in a spindle cell rhabdomyosarcoma with MYOD1 L122R mutation
Florence Choo, Igor Odinstov, Kevin Nusser, Katelyn S. Nicholson, Lara Davis, Christopher L. Corless, Linda Stork, Romel Somwar, Marc Ladanyi, Jessica L. Davis, Monika A. Davare
Cold Spring Harb Mol Case Stud. 2022 Jan; 8(1): a006140. doi: 10.1101/mcs.a006140
Correction in:
Cold Spring Harb Mol Case Stud. 2022 Apr; 8(3): a006216.
PMCID:
PMC8744497
AbstractArticlePDF–14M
5.
Impact of cytosine methylation on DNA binding specificities of human transcription factors
Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush K. Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, Alexander Popov, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale
Science. Author manuscript; available in PMC 2021 Mar 30.
Published in final edited form as: Science. 2017 May 5; 356(6337): eaaj2239. doi: 10.1126/science.aaj2239
PMCID:
PMC8009048
AbstractArticlePDF–2.6M
6.
The nuclear import of the transcription factor MyoD is reduced in mesenchymal stem cells grown in a 3D micro-engineered niche
Emanuela Jacchetti, Ramin Nasehi, Lucia Boeri, Valentina Parodi, Alessandro Negro, Diego Albani, Roberto Osellame, Giulio Cerullo, Jose Felix Rodriguez Matas, Manuela Teresa Raimondi
Sci Rep. 2021; 11: 3021. Published online 2021 Feb 4. doi: 10.1038/s41598-021-81920-2
PMCID:
PMC7862644
AbstractArticlePDF–14M
7.
Interaction between SNAI2 and MYOD enhances oncogenesis and suppresses differentiation in Fusion Negative Rhabdomyosarcoma
Silvia Pomella, Prethish Sreenivas, Berkley E. Gryder, Long Wang, David Milewski, Matteo Cassandri, Kunal Baxi, Nicole R. Hensch, Elena Carcarino, Young Song, Hsien-Chao Chou, Marielle E. Yohe, Benjamin Z. Stanton, Bruno Amadio, Ignazio Caruana, Cristiano De Stefanis, Rita De Vito, Franco Locatelli, Yidong Chen, Eleanor Y. Chen, Peter Houghton, Javed Khan, Rossella Rota, Myron S. Ignatius
Nat Commun. 2021; 12: 192. Published online 2021 Jan 8. doi: 10.1038/s41467-020-20386-8
PMCID:
PMC7794422
AbstractArticlePDF–5.8M
8.
MyoD1 suppresses cell migration and invasion by inhibiting FUT4 transcription in human gastric cancer cells
Fei Wu, Yannan Qin, Qiuyu Jiang, Jinyuan Zhang, Fang Li, Qian Li, Xiaofei Wang, Yi Gao, Jiyu Miao, Chen Guo, Yang Yang, Lei Ni, Liying Liu, Shuqun Zhang, Chen Huang
Cancer Gene Ther. 2020; 27(10): 773–784. Published online 2019 Dec 12. doi: 10.1038/s41417-019-0153-3
PMCID:
PMC7661344
AbstractArticlePDF–4.2M
9.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
10.
CASZ1 induces skeletal muscle and rhabdomyosarcoma differentiation through a feed-forward loop with MYOD and MYOG
Zhihui Liu, Xiyuan Zhang, Haiyan Lei, Norris Lam, Sakereh Carter, Oliver Yockey, Max Xu, Arnulfo Mendoza, Edjay R. Hernandez, Jun S. Wei, Javed Khan, Marielle E. Yohe, Jack F. Shern, Carol J. Thiele
Nat Commun. 2020; 11: 911. Published online 2020 Feb 14. doi: 10.1038/s41467-020-14684-4
PMCID:
PMC7021771
AbstractArticlePDF–3.1M
11.
Transcription Factor-Directed Re-Wiring of Chromatin Architecture for Somatic Cell Nuclear Reprogramming Toward Trans-differentiation
Alessandra Dall’Agnese, Luca Caputo, Chiara Nicoletti, Julia di Iulio, Anthony Schmitt, Sole Gatto, Yarui Diao, Zhen Ye, Mattia Forcato, Ranjan Perera, Silvio Bicciato, Amalio Telenti, Bing Ren, Pier Lorenzo Puri
Mol Cell. Author manuscript; available in PMC 2020 Nov 7.
Published in final edited form as: Mol Cell. 2019 Nov 7; 76(3): 453–472.e8. Published online 2019 Sep 10. doi: 10.1016/j.molcel.2019.07.036
PMCID:
PMC6842445
AbstractArticlePDF–2.8M
12.
Master control: transcriptional regulation of mammalian Myod
Fiona C. Wardle
J Muscle Res Cell Motil. 2019; 40(2): 211–226. Published online 2019 Jul 12. doi: 10.1007/s10974-019-09538-6
PMCID:
PMC6726840
AbstractArticlePDF–885K
13.
Activation of Muscle Enhancers by MyoD and epigenetic modifiers
Roy Blum
J Cell Biochem. Author manuscript; available in PMC 2019 Feb 26.
Published in final edited form as: J Cell Biochem. 2014 Nov; 115(11): 1855–1867. doi: 10.1002/jcb.24854
PMCID:
PMC6390963
AbstractArticlePDF–1009K
14.
SNAIL is a key regulator of alveolar rhabdomyosarcoma tumor growth and differentiation through repression of MYF5 and MYOD function
Klaudia Skrzypek, Anna Kusienicka, Elzbieta Trzyna, Barbara Szewczyk, Aleksandra Ulman, Pawel Konieczny, Tomasz Adamus, Bogna Badyra, Marcin Kortylewski, Marcin Majka
Cell Death Dis. 2018 Jun; 9(6): 643. Published online 2018 May 29. doi: 10.1038/s41419-018-0693-8
PMCID:
PMC5974324
AbstractArticlePDF–4.0M
15.
Intrinsic DNA binding properties demonstrated for lineage-specifying basic helix-loop-helix transcription factors
Bradford H. Casey, Rahul K. Kollipara, Karine Pozo, Jane E. Johnson
Genome Res. 2018 Apr; 28(4): 484–496. doi: 10.1101/gr.224360.117
PMCID:
PMC5880239
AbstractArticlePDF–11M
16.
Incomplete MyoD-induced transdifferentiation is associated with chromatin remodeling deficiencies
Dinesh Manandhar, Lingyun Song, Ami Kabadi, Jennifer B. Kwon, Lee E. Edsall, Melanie Ehrlich, Koji Tsumagari, Charles A. Gersbach, Gregory E. Crawford, Raluca Gordân
Nucleic Acids Res. 2017 Nov 16; 45(20): 11684–11699. Published online 2017 Sep 7. doi: 10.1093/nar/gkx773
PMCID:
PMC5714206
AbstractArticlePDF–5.6M
17.
miRNA-223 upregulated by MYOD inhibits myoblast proliferation by repressing IGF2 and facilitates myoblast differentiation by inhibiting ZEB1
Guihuan Li, Wen Luo, Bahareldin A Abdalla, Hongjia Ouyang, Jiao Yu, Fan Hu, Qinghua Nie, Xiquan Zhang
Cell Death Dis. 2017 Oct; 8(10): e3094. Published online 2017 Oct 5. doi: 10.1038/cddis.2017.479
PMCID:
PMC5682648
AbstractArticlePDF–6.8M
18.
MeCP2 Promotes Gastric Cancer Progression Through Regulating FOXF1/Wnt5a/β-Catenin and MYOD1/Caspase-3 Signaling Pathways
Lingyu Zhao, Yingxun Liu, Dongdong Tong, Yannan Qin, Juan Yang, Meng Xue, Ning Du, Liying Liu, Bo Guo, Ni Hou, Jia Han, Siyuan Liu, Na Liu, Xiaoge Zhao, Lumin Wang, Yanke Chen, Chen Huang
EBioMedicine. 2017 Feb; 16: 87–100. Published online 2017 Jan 17. doi: 10.1016/j.ebiom.2017.01.021
Correction in:
eBioMedicine. 2023 May; 91: 104579.
PMCID:
PMC5474507
AbstractArticlePDF–2.8M
19.
Myogenic regulatory transcription factors regulate growth in rhabdomyosarcoma
Inês M Tenente, Madeline N Hayes, Myron S Ignatius, Karin McCarthy, Marielle Yohe, Sivasish Sindiri, Berkley Gryder, Mariana L Oliveira, Ashwin Ramakrishnan, Qin Tang, Eleanor Y Chen, G Petur Nielsen, Javed Khan, David M Langenau
eLife. 2017; 6: e19214. Published online 2017 Jan 12. doi: 10.7554/eLife.19214
PMCID:
PMC5231408
AbstractArticlePDF–6.5M
20.
A cross-talk between DNA methylation and H3 lysine 9 dimethylation at the KvDMR1 region controls the induction of Cdkn1c in muscle cells
Oriella Andresini, Agnese Ciotti, Marianna N. Rossi, Cecilia Battistelli, Mariarosaria Carbone, Rossella Maione
Epigenetics. 2016 Nov; 11(11): 791–803. Published online 2016 Sep 9. doi: 10.1080/15592294.2016.1230576
PMCID:
PMC5221659
AbstractArticlePDF–1.0M

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