PMC Links for GEO Profiles (Select 40747226) - PMC

Select item 107578521.

Two predicted α-helices within the prion-like domain of TIAR-1 play a crucial role in its association with stress granules in Caenorhabditis elegans

D. A. Fuentes-Jiménez, L. S. Salinas, E. Morales-Oliva, V. A. Ramírez-Ramírez, M. Arciniega, R. E. Navarro

Front Cell Dev Biol. 2023; 11: 1265104. Published online 2023 Dec 15. doi: 10.3389/fcell.2023.1265104

PMCID:: PMC10757852

Abstract Article PDF–4.6M

Select item 97560882.

Novel putative interactors of FZO-1/mitofusin 2 identified using large-scale yeast two-hybrid screening in C. elegans

Samiksha Dhananjay, Gursimran Chandhok, Brent Neumann

MicroPubl Biol. 2022; 2022: 10.17912/micropub.biology.000674. Published online 2022 Dec 1. doi: 10.17912/micropub.biology.000674

Correction in:: MicroPubl Biol. 2022; 2022: 10.17912/micropub.biology.000728.

PMCID:: PMC9756088

Abstract Article PDF–246K

Select item 94378483.

Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans

Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono

J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343

PMCID:: PMC9437848

Abstract Article PDF–2.0M

Select item 90650844.

Functional identification of microRNA-centered complexes in C. elegans

Shilpa Hebbar, Ganesh Panzade, Ajay A. Vashisht, James A. Wohlschlegel, Isana Veksler-Lublinsky, Anna Y. Zinovyeva

Sci Rep. 2022; 12: 7133. Published online 2022 May 3. doi: 10.1038/s41598-022-10771-2

PMCID:: PMC9065084

Abstract Article PDF–2.2M

Select item 84467935.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Abstract Article PDF–1.6M

Select item 83311836.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 80590947.

Phosphofructokinase relocalizes into subcellular compartments with liquid-like properties in vivo

SoRi Jang, Zhao Xuan, Ross C. Lagoy, Louise M. Jawerth, Ian J. Gonzalez, Milind Singh, Shavanie Prashad, Hee Soo Kim, Avinash Patel, Dirk R. Albrecht, Anthony A. Hyman, Daniel A. Colón-Ramos

Biophys J. 2021 Apr 6; 120(7): 1170–1186. Published online 2020 Aug 12. doi: 10.1016/j.bpj.2020.08.002

PMCID:: PMC8059094

Abstract Article PDF–2.4M

Select item 67467568.

Identification of proteins and miRNAs that specifically bind an mRNA in vivo

Kathrin Theil, Koshi Imami, Nikolaus Rajewsky

Nat Commun. 2019; 10: 4205. Published online 2019 Sep 16. doi: 10.1038/s41467-019-12050-7

PMCID:: PMC6746756

Abstract Article PDF–6.8M

Select item 62165909.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 556080410.

LIN-41 and OMA Ribonucleoprotein Complexes Mediate a Translational Repression-to-Activation Switch Controlling Oocyte Meiotic Maturation and the Oocyte-to-Embryo Transition in Caenorhabditis elegans

Tatsuya Tsukamoto, Micah D. Gearhart, Caroline A. Spike, Gabriela Huelgas-Morales, Makaela Mews, Peter R. Boag, Traude H. Beilharz, David Greenstein

Genetics. 2017 Aug; 206(4): 2007–2039. Published online 2017 Jun 1. doi: 10.1534/genetics.117.203174

PMCID:: PMC5560804

Abstract Article PDF–3.9M

Select item 482563911.

The Stress Granule RNA-Binding Protein TIAR-1 Protects Female Germ Cells from Heat Shock in Caenorhabditis elegans

Gabriela Huelgas-Morales, Carlos Giovanni Silva-García, Laura S. Salinas, David Greenstein, Rosa E. Navarro

G3 (Bethesda) 2016 Apr; 6(4): 1031–1047. Published online 2016 Feb 9. doi: 10.1534/g3.115.026815

PMCID:: PMC4825639

Abstract Article PDF–3.1M

Select item 439057912.

Conserved RNA-Binding Proteins Required for Dendrite Morphogenesis in Caenorhabditis elegans Sensory Neurons

Simona Antonacci, Daniel Forand, Margaret Wolf, Courtney Tyus, Julia Barney, Leah Kellogg, Margo A. Simon, Genevieve Kerr, Kristen L. Wells, Serena Younes, Nathan T. Mortimer, Eugenia C. Olesnicky, Darrell J. Killian

G3 (Bethesda) 2015 Apr; 5(4): 639–653. Published online 2015 Feb 10. doi: 10.1534/g3.115.017327

PMCID:: PMC4390579

Abstract Article PDF–2.3M

Select item 411149913.

Diverse Functions of mRNA Metabolism Factors in Stress Defense and Aging of Caenorhabditis elegans

Aris Rousakis, Anna Vlanti, Fivos Borbolis, Fani Roumelioti, Marianna Kapetanou, Popi Syntichaki

PLoS One. 2014; 9(7): e103365. Published online 2014 Jul 25. doi: 10.1371/journal.pone.0103365

PMCID:: PMC4111499

Abstract Article PDF–14M

Select item 310207714.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 305792315.

Empirically-controlled mapping of the Caenorhabditis elegans protein-protein interactome network

Nicolas Simonis, Jean-François Rual, Anne-Ruxandra Carvunis, Murat Tasan, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Julie M Sahalie, Kavitha Venkatesan, Fana Gebreab, Sebiha Cevik, Niels Klitgord, Changyu Fan, Pascal Braun, Ning Li, Nono Ayivi-Guedehoussou, Elizabeth Dann, Nicolas Bertin, David Szeto, Amélie Dricot, Muhammed A Yildirim, Chenwei Lin, Anne-Sophie de Smet, Huey-Ling Kao, Christophe Simon, Alex Smolyar, Jin Sook Ahn, Muneesh Tewari, Mike Boxem, Stuart Milstein, Haiyuan Yu, Matija Dreze, Jean Vandenhaute, Kristin C Gunsalus, Michael E Cusick, David E Hill, Jan Tavernier, Frederick P Roth, Marc Vidal

Nat Methods. Author manuscript; available in PMC 2011 Mar 15.

Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 47–54. doi: 10.1038/nmeth.1279

PMCID:: PMC3057923

Abstract Article PDF–3.0M

Select item 186341916.

Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity

Julian Ceron, Jean-François Rual, Abha Chandra, Denis Dupuy, Marc Vidal, Sander van den Heuvel

BMC Dev Biol. 2007; 7: 30. Published online 2007 Apr 6. doi: 10.1186/1471-213X-7-30

PMCID:: PMC1863419

Abstract Article PDF–1.4M

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