PMC Links for GEO Profiles (Select 42389898) - PMC

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Items: 20

Select item 81650301.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 55316112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 46565813.

Establishment of a transgenic cell line stably expressing human cytochrome P450 2C18 and identification of a CYP2C18 clone with exon 5 missing

Jian Zhu-Ge, Ying-Nian Yu, Yu-Li Qian, Xin Li

World J Gastroenterol. 2002 Oct 15; 8(5): 888–892. Published online 2002 Oct 15. doi: 10.3748/wjg.v8.i5.888

PMCID:: PMC4656581

Abstract Article PDF–165K

Select item 46479414.

hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes

Philippe Lamesch, Ning Li, Stuart Milstein, Changyu Fan, Tong Hao, Gabor Szabo, Zhenjun Hu, Kavitha Venkatesan, Graeme Bethel, Paul Martin, Jane Rogers, Stephanie Lawlor, Stuart McLaren, Amélie Dricot, Heather Borick, Michael E. Cusick, Jean Vandenhaute, Ian Dunham, David E. Hill, Marc Vidal

Genomics. 2007 Mar; 89(3): 307–315. doi: 10.1016/j.ygeno.2006.11.012

PMCID:: PMC4647941

Abstract Article

Select item 46172115.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 37595806.

Genetic variants associated with warfarin dose in African-American individuals: a genome-wide association study

Minoli A Perera, Larisa H Cavallari, Nita A Limdi, Eric R Gamazon, Anuar Konkashbaev, Roxana Daneshjou, Anna Pluzhnikov, Dana C Crawford, Jelai Wang, Nianjun Liu, Nicholas Tatonetti, Stephane Bourgeois, Harumi Takahashi, Yukiko Bradford, Benjamin M Burkley, Robert J Desnick, Jonathan L Halperin, Sherief I Khalifa, Taimour Y Langaee, Steven A Lubitz, Edith A Nutescu, Matthew Oetjens, Mohamed H Shahin, Shitalben R Patel, Hersh Sagreiya, Matthew Tector, Karen E Weck, Mark J Rieder, Stuart A Scott, Alan HB Wu, James K Burmester, Mia Wadelius, Panos Deloukas, Michael J Wagner, Taisei Mushiroda, Michiaki Kubo, Dan M Roden, Nancy J Cox, Russ B Altman, Teri E Klein, Yusuke Nakamura, Julie A Johnson

Lancet. 2013 Aug 31; 382(9894): 790–796. doi: 10.1016/S0140-6736(13)60681-9

PMCID:: PMC3759580

Abstract Article

Select item 36415697.

Association of Cytochrome P450 2C19 Genotype With the Antiplatelet Effect and Clinical Efficacy of Clopidogrel Therapy

Dr Alan R. Shuldiner, Dr Jeffrey R. O'Connell, Mr Kevin P. Bliden, Dr Amish Gandhi, Ms Kathleen Ryan, Dr Richard B. Horenstein, Dr Coleen M. Damcott, Ms Ruth Pakyz, Dr Udaya S. Tantry, Mr Quince Gibson, Dr Toni I. Pollin, Dr Wendy Post, Dr Afshin Parsa, Dr Braxton D. Mitchell, Dr Nauder Faraday, Dr William Herzog, Dr Paul A. Gurbel

JAMA. Author manuscript; available in PMC 2013 May 2.

Published in final edited form as: JAMA. 2009 Aug 26; 302(8): 849–857. doi: 10.1001/jama.2009.1232

PMCID:: PMC3641569

Abstract Article PDF–1.1M

Select item 32617088.

Toward an understanding of the protein interaction network of the human liver

Jian Wang, Keke Huo, Lixin Ma, Liujun Tang, Dong Li, Xiaobi Huang, Yanzhi Yuan, Chunhua Li, Wei Wang, Wei Guan, Hui Chen, Chaozhi Jin, Junchen Wei, Wanqiao Zhang, Yongsheng Yang, Qiongming Liu, Ying Zhou, Cuili Zhang, Zhihao Wu, Wangxiang Xu, Ying Zhang, Tao Liu, Donghui Yu, Yaping Zhang, Liang Chen, Dewu Zhu, Xing Zhong, Lixin Kang, Xiang Gan, Xiaolan Yu, Qi Ma, Jing Yan, Li Zhou, Zhongyang Liu, Yunping Zhu, Tao Zhou, Fuchu He, Xiaoming Yang

Mol Syst Biol. 2011; 7: 536. Published online 2011 Oct 11. doi: 10.1038/msb.2011.67

Correction in:: Mol Syst Biol. 2017 Dec; 13(12): 965.

PMCID:: PMC3261708

Abstract Article PDF–2.0M

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 304485110.

Interactome mapping suggests new mechanistic details underlying Alzheimer's disease

Montserrat Soler-López, Andreas Zanzoni, Ricart Lluís, Ulrich Stelzl, Patrick Aloy

Genome Res. 2011 Mar; 21(3): 364–376. doi: 10.1101/gr.114280.110

PMCID:: PMC3044851

Abstract Article PDF–2.1M

Select item 295791811.

Evaluation of Candidate Genes for Cholinesterase Activity in Farmworkers Exposed to Organophosphorus Pesticides: Association of Single Nucleotide Polymorphisms in BCHE

Timothy D. Howard, Fang-Chi Hsu, Joseph G. Grzywacz, Haiying Chen, Sara A. Quandt, Quirina M. Vallejos, Lara E. Whalley, Wei Cui, Stephanie Padilla, Thomas A. Arcury

Environ Health Perspect. 2010 Oct; 118(10): 1395–1399. Published online 2010 Jun 8. doi: 10.1289/ehp.0901764

PMCID:: PMC2957918

Abstract Article PDF–1.5M

Select item 289380012.

A Large-scale genetic association study of esophageal adenocarcinoma risk

Chen-yu Liu, Michael C. Wu, Feng Chen, Monica Ter-Minassian, Kofi Asomaning, Rihong Zhai, Zhaoxi Wang, Li Su, Rebecca S. Heist, Matthew H. Kulke, Xihong Lin, Geoffrey Liu, David C. Christiani

Carcinogenesis. 2010 Jul; 31(7): 1259–1263. Published online 2010 May 7. doi: 10.1093/carcin/bgq092

PMCID:: PMC2893800

Abstract Article PDF–84K

Select item 286078313.

Transcriptomic and genetic studies identify IL-33 as a candidate gene for Alzheimer’s disease

J Chapuis, D Hot, F Hansmannel, O Kerdraon, S Ferreira, C Hubans, CA Maurage, L Huot, F Bensemain, G Laumet, AM Ayral, N Fievet, JJ Hauw, ST DeKosky, Y Lemoine, T Iwatsubo, F Wavrant-Devrièze, JF Dartigues, C Tzourio, L Buée, F Pasquier, C Berr, D Mann, C Lendon, A Alpérovitch, MI Kamboh, P Amouyel, JC Lambert

Mol Psychiatry. Author manuscript; available in PMC 2010 Apr 28.

Published in final edited form as: Mol Psychiatry. 2009 Nov; 14(11): 1004–1016. Published online 2009 Feb 10. doi: 10.1038/mp.2009.10

PMCID:: PMC2860783

Abstract Article PDF–1.3M

Select item 260727614.

Few alterations in clinical pathology and histopathology observed in a CYP2C18&19 humanized mice model

Susanne Löfgren, Stina Ekman, Ylva Terelius, Ronny Fransson-Steen

Acta Vet Scand. 2008; 50(1): 47. Published online 2008 Nov 27. doi: 10.1186/1751-0147-50-47

PMCID:: PMC2607276

Abstract Article PDF–426K

Select item 179706415.

Association of warfarin dose with genes involved in its action and metabolism

Mia Wadelius, Leslie Y. Chen, Niclas Eriksson, Suzannah Bumpstead, Jilur Ghori, Claes Wadelius, David Bentley, Ralph McGinnis, Panos Deloukas

Hum Genet. 2007 Mar; 121(1): 23–34. Published online 2006 Oct 18. doi: 10.1007/s00439-006-0260-8

PMCID:: PMC1797064

Abstract Article PDF–599K

Select item 138022516.

A Scan of Chromosome 10 Identifies a Novel Locus Showing Strong Association with Late-Onset Alzheimer Disease

Andrew Grupe, Yonghong Li, Charles Rowland, Petra Nowotny, Anthony L. Hinrichs, Scott Smemo, John S. K. Kauwe, Taylor J. Maxwell, Sara Cherny, Lisa Doil, Kristina Tacey, Ryan van Luchene, Amanda Myers, Fabienne Wavrant-De Vrièze, Mona Kaleem, Paul Hollingworth, Luke Jehu, Catherine Foy, Nicola Archer, Gillian Hamilton, Peter Holmans, Chris M. Morris, Joseph Catanese, John Sninsky, Thomas J. White, John Powell, John Hardy, Michael O’Donovan, Simon Lovestone, Lesley Jones, John C. Morris, Leon Thal, Michael Owen, Julie Williams, Alison Goate

Am J Hum Genet. 2006 Jan; 78(1): 78–88. Published online 2005 Nov 15. doi: 10.1086/498851