PMC Links for GEO Profiles (Select 44810036) - PMC

Ronald L. Shanderson, Ian D. Ferguson, Zurab Siprashvili, Luca Ducoli, Albert M. Li, Weili Miao, Suhas Srinivasan, Mary Grace Velasco, Yang Li, Jiangbin Ye, Paul A. Khavari

Version 1. bioRxiv. Preprint. 2024 Mar 9. doi: 10.1101/2024.03.08.581297

PMCID:: PMC10942467

Abstract Article PDF–6.5M

Select item 109393594.

Checkpoint activation by Spd1: a competition-based system relying on tandem disordered PCNA binding motifs

Johan G Olsen, Andreas Prestel, Noah Kassem, Sebastian S Broendum, Hossain Mohammad Shamim, Signe Simonsen, Martin Grysbæk, Josefine Mortensen, Louise Lund Rytkjær, Gitte W Haxholm, Riccardo Marabini, Christian Holmberg, Antony M Carr, Ramon Crehuet, Olaf Nielsen, Birthe B Kragelund

Nucleic Acids Res. 2024 Feb 28; 52(4): 2030–2044. Published online 2024 Jan 23. doi: 10.1093/nar/gkae011

PMCID:: PMC10939359

Abstract Article PDF–2.6M

Select item 108424615.

FANCD2-dependent mitotic DNA synthesis relies on PCNA K164 ubiquitination

Wendy Leung, Ryan M. Baxley, Emma Traband, Ya-Chu Chang, Colette B. Rogers, Liangjun Wang, Wesley Durrett, Kendall S. Bromley, Lidia Fiedorowicz, Tanay Thakar, Anika Tella, Alexandra Sobeck, Eric A. Hendrickson, George-Lucian Moldovan, Naoko Shima, Anja-Katrin Bielinsky

Cell Rep. Author manuscript; available in PMC 2024 Feb 5.

Published in final edited form as: Cell Rep. 2023 Dec 26; 42(12): 113523. Published online 2023 Dec 5. doi: 10.1016/j.celrep.2023.113523

PMCID:: PMC10842461

Abstract Article PDF–2.2M

Select item 107270106.

Molecular insight into the PCNA-binding mode of FBH1

Jiuyang Liu, Belén Chaves-Arquero, Pengcheng Wei, Adam H. Tencer, Antonio Ruiz-Albor, Gongyi Zhang, Francisco J. Blanco, Tatiana G. Kutateladze

Structure. Author manuscript; available in PMC 2024 May 4.

Published in final edited form as: Structure. 2023 May 4; 31(5): 511–517.e3. Published online 2023 Mar 28. doi: 10.1016/j.str.2023.03.004

PMCID:: PMC10727010

Abstract Article PDF–1.9M

Select item 106176737.

The midnolin-proteasome pathway catches proteins for ubiquitination-independent degradation

Xin Gu, Christopher Nardone, Nolan Kamitaki, Aoyue Mao, Stephen J. Elledge, Michael E. Greenberg

Science. Author manuscript; available in PMC 2023 Oct 31.

Published in final edited form as: Science. 2023 Aug 25; 381(6660): eadh5021. Published online 2023 Aug 25. doi: 10.1126/science.adh5021

PMCID:: PMC10617673

Abstract Article PDF–3.6M

Select item 106028678.

Short-range end resection requires ATAD5-mediated PCNA unloading for faithful homologous recombination

Su Hyung Park, Namwoo Kim, Nalae Kang, Eunjin Ryu, Eun A Lee, Jae Sun Ra, Anton Gartner, Sukhyun Kang, Kyungjae Myung, Kyoo-young Lee

Nucleic Acids Res. 2023 Oct 27; 51(19): 10519–10535. Published online 2023 Sep 22. doi: 10.1093/nar/gkad776

PMCID:: PMC10602867

Abstract Article PDF–2.2M

Select item 105658769.

Pulse-SILAC and Interactomics Reveal Distinct DDB1-CUL4–Associated Factors, Cellular Functions, and Protein Substrates

Jennifer Raisch, Marie-Line Dubois, Marika Groleau, Dominique Lévesque, Thomas Burger, Carla-Marie Jurkovic, Romain Brailly, Gwendoline Marbach, Alyson McKenna, Catherine Barrette, Pierre-Étienne Jacques, François-Michel Boisvert

Mol Cell Proteomics. 2023 Oct; 22(10): 100644. Published online 2023 Sep 7. doi: 10.1016/j.mcpro.2023.100644

PMCID:: PMC10565876

Abstract Article PDF–3.7M

Select item 1049740610.

PCNA recruits cohesin loader Scc2 to ensure sister chromatid cohesion

Ivan Psakhye, Ryotaro Kawasumi, Takuya Abe, Kouji Hirota, Dana Branzei

Nat Struct Mol Biol. 2023; 30(9): 1286–1294. Published online 2023 Aug 17. doi: 10.1038/s41594-023-01064-x

PMCID:: PMC10497406

Abstract Article PDF–9.2M

Select item 1048053511.

Mapping the MOB proteins’ proximity network reveals a unique interaction between human MOB3C and the RNase P complex

Islam E. Elkholi, Jonathan Boulais, Marie-Pier Thibault, Hong-Duc Phan, Amélie Robert, Lien B. Lai, Denis Faubert, Matthew J. Smith, Venkat Gopalan, Jean-Franҫois Côté

J Biol Chem. 2023 Sep; 299(9): 105123. Published online 2023 Aug 1. doi: 10.1016/j.jbc.2023.105123

PMCID:: PMC10480535

Abstract Article PDF–2.4M

Select item 1031267412.

AI-guided pipeline for protein-protein interaction drug discovery identifies a SARS-CoV-2 inhibitor

Philipp Trepte, Christopher Secker, Simona Kostova, Sibusiso B. Maseko, Soon Gang Choi, Jeremy Blavier, Igor Minia, Eduardo Silva Ramos, Patricia Cassonnet, Sabrina Golusik, Martina Zenkner, Stephanie Beetz, Mara J. Liebich, Nadine Scharek, Anja Schütz, Marcel Sperling, Michael Lisurek, Yang Wang, Kerstin Spirohn, Tong Hao, Michael A. Calderwood, David E. Hill, Markus Landthaler, Julien Olivet, Jean-Claude Twizere, Marc Vidal, Erich E. Wanker

Version 1. bioRxiv. Preprint. 2023 Jun 14. doi: 10.1101/2023.06.14.544560

Published in:: Mol Syst Biol. 2024 Apr; 20(4): 428–457.

PMCID:: PMC10312674

Abstract Article PDF–9.6M

Select item 1023742213.

TRIM67 drives tumorigenesis in oligodendrogliomas through Rho GTPase-dependent membrane blebbing

Engin Demirdizen, Ruslan Al-Ali, Ashwin Narayanan, Xueyuan Sun, Julianna Patricia Varga, Bianca Steffl, Manuela Brom, Damir Krunic, Claudia Schmidt, Gabriele Schmidt, Felix Bestvater, Julian Taranda, Şevin Turcan

Neuro Oncol. 2023 Jun; 25(6): 1031–1043. Published online 2022 Nov 22. doi: 10.1093/neuonc/noac233

PMCID:: PMC10237422

Abstract Article PDF–23M

Select item 1016527414.

A thermosensitive PCNA allele underlies an ataxia-telangiectasia-like disorder

Joseph Magrino, Veridiana Munford, Davi Jardim Martins, Thais K. Homma, Brendan Page, Christl Gaubitz, Bruna L. Freire, Antonio M. Lerario, Juliana Brandstetter Vilar, Antonio Amorin, Emília K.E. Leão, Fernando Kok, Carlos FM. Menck, Alexander AL. Jorge, Brian A. Kelch

J Biol Chem. 2023 May; 299(5): 104656. Published online 2023 Mar 27. doi: 10.1016/j.jbc.2023.104656

PMCID:: PMC10165274

Abstract Article PDF–2.5M

Select item 1016456415.

The ubiquitin-specific protease USP36 SUMOylates EXOSC10 and promotes the nucleolar RNA exosome function in rRNA processing

Yingxiao Chen, Yanping Li, Roselyn S Dai, Jonathan C Savage, Ujwal Shinde, John Klimek, Larry L David, Emma A Young, Markus Hafner, Rosalie C Sears, Xiao-Xin Sun, Mu-Shui Dai

Nucleic Acids Res. 2023 May 8; 51(8): 3934–3949. Published online 2023 Mar 13. doi: 10.1093/nar/gkad140

PMCID:: PMC10164564

Abstract Article PDF–3.8M

Select item 1014222716.

Ubiquitin specific peptidase 37 and PCNA interaction promotes osteosarcoma pathogenesis by modulating replication fork progression

Ravi Chauhan, Ashna Gupta, Lakshay Malhotra, Ajaz A. Bhat, Raj K. Pandita, Tariq Masoodi, Gunjan Dagar, Hana Q. Sadida, Sara K. Al-Marzooqi, Atul Batra, Sameer Bakhshi, Mehar Chand Sharma, Pranay Tanwar, Shah Alam Khan, Ethayathulla Abdul Samath, Shahab Uddin, Ammira S. Al-Shabeeb Akil, Mohammad Haris, Muzafar A. Macha, Tej K. Pandita, Mayank Singh

J Transl Med. 2023; 21: 286. Published online 2023 Apr 28. doi: 10.1186/s12967-023-04126-2

PMCID:: PMC10142227

Abstract Article PDF–4.2M

Select item 1009797617.

RFWD3 promotes ZRANB3 recruitment to regulate the remodeling of stalled replication forks

Chandler E. Moore, Selin E. Yalcindag, Hanna Czeladko, Ramya Ravindranathan, Yodhara Wijesekara Hanthi, Juliana C. Levy, Vincenzo Sannino, Detlev Schindler, Alberto Ciccia, Vincenzo Costanzo, Andrew E.H. Elia

J Cell Biol. 2023 May 1; 222(5): e202106022. Published online 2023 Apr 10. doi: 10.1083/jcb.202106022

PMCID:: PMC10097976

Abstract Article PDF–6.8M

Select item 1002054618.

Unchanged PCNA and DNMT1 dynamics during replication in DNA ligase I-deficient cells but abnormal chromatin levels of non-replicative histone H1

Seema Khattri Bhandari, Nathaniel Wiest, Annahita Sallmyr, Ruofei Du, Laure Ferry, Pierre-Antoine Defossez, Alan E. Tomkinson

Sci Rep. 2023; 13: 4363. Published online 2023 Mar 16. doi: 10.1038/s41598-023-31367-4

PMCID:: PMC10020546

Abstract Article PDF–3.7M

Select item 1000589819.

The p97/VCP segregase is essential for arsenic-induced degradation of PML and PML-RARA

Ellis G. Jaffray, Michael H. Tatham, Barbara Mojsa, Magda Liczmanska, Alejandro Rojas-Fernandez, Yili Yin, Graeme Ball, Ronald T. Hay

J Cell Biol. 2023 Apr 3; 222(4): e202201027. Published online 2023 Feb 28. doi: 10.1083/jcb.202201027

PMCID:: PMC10005898

Abstract Article PDF–6.7M

Select item 995044720.

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma

Yu-Fei Cao, Lei Xie, Bei-Bei Tong, Man-Yu Chu, Wen-Qi Shi, Xiang Li, Jian-Zhong He, Shao-Hong Wang, Zhi-Yong Wu, Dan-Xia Deng, Ya-Qi Zheng, Zhi-Mao Li, Xiu-E Xu, Lian-Di Liao, Yin-Wei Cheng, Li-Yan Li, Li-Yan Xu, En-Min Li

Cell Death Differ. 2023 Feb; 30(2): 527–543. Published online 2022 Dec 16. doi: 10.1038/s41418-022-01104-x

PMCID:: PMC9950447

Abstract Article PDF–8.4M

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PMC Links for GEO Profiles (Select 44810036) (541)
PMC
Conserved Domain Links for Protein (Select 6322853) (3)
Conserved Domains
dynamin-like GTPase VPS1 [Saccharomyces cerevisiae S288C]
dynamin-like GTPase VPS1 [Saccharomyces cerevisiae S288C]
gi|6322853|ref|NP_012926.1|

Protein
Cusickiella douglasii voucher E. Schranz 1072 internal transcribed spacer 1, par...
Cusickiella douglasii voucher E. Schranz 1072 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
gi|401018600|gb|JX146961.1|

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