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Select item 109457071.

Comparative interactome analysis of α-arrestin families in human and Drosophila

Kyung-Tae Lee, Inez KA Pranoto, Soon-Young Kim, Hee-Joo Choi, Ngoc Bao To, Hansong Chae, Jeong-Yeon Lee, Jung-Eun Kim, Young V Kwon, Jin-Wu Nam

eLife. 2024; 12: RP88328. Published online 2024 Jan 25. doi: 10.7554/eLife.88328

PMCID:: PMC10945707

Abstract Article PDF–2.8M

Select item 99224682.

FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia

Xiao-Na Zhu, Yu-Sheng Wei, Qian Yang, Hao-Ran Liu, Zhe Zhi, Di Zhu, Li Xia, Deng-Li Hong, Yun Yu, Guo-Qiang Chen

J Hematol Oncol. 2023; 16: 9. Published online 2023 Feb 11. doi: 10.1186/s13045-023-01400-0

PMCID:: PMC9922468

Abstract Article PDF–4.9M

Select item 95994213.

Human Cytomegalovirus Utilizes Multiple Viral Proteins to Regulate the Basement Membrane Protein Nidogen 1

Man I Kuan, Lisa B. Caruso, Anamaria G. Zavala, Pranav S. J. B. Rana, John M. O'Dowd, Italo Tempera, Elizabeth A. Fortunato

J Virol. 2022 Oct; 96(20): e01336-22. Published online 2022 Oct 11. doi: 10.1128/jvi.01336-22

PMCID:: PMC9599421

Abstract Article PDF–5.4M

Select item 95875714.

Nidogen-1 could play a role in diabetic kidney disease development in type 2 diabetes: a genome-wide association meta-analysis

Ahmed Khattab, Ali Torkamani

Hum Genomics. 2022; 16: 47. Published online 2022 Oct 21. doi: 10.1186/s40246-022-00422-y

PMCID:: PMC9587571

Abstract Article PDF–1.5M

Select item 92316235.

ESCPE-1 mediates retrograde endosomal sorting of the SARS-CoV-2 host factor Neuropilin-1

Boris Simonetti, James L. Daly, Lorena Simón-Gracia, Katja Klein, Saroja Weeratunga, Carlos Antón-Plágaro, Allan Tobi, Lorna Hodgson, Philip A. Lewis, Kate J. Heesom, Deborah K. Shoemark, Andrew D. Davidson, Brett M. Collins, Tambet Teesalu, Yohei Yamauchi, Peter J. Cullen

Proc Natl Acad Sci U S A. 2022 Jun 21; 119(25): e2201980119. Published online 2022 Jun 13. doi: 10.1073/pnas.2201980119

PMCID:: PMC9231623

Abstract Article PDF–6.0M

Select item 91052356.

Cullin 3 Exon 9 Deletion in Familial Hyperkalemic Hypertension Impairs Cullin3-Ring-E3 Ligase (CRL3) Dynamic Regulation and Cycling

Ilektra Kouranti, Waed Abdel Khalek, Stephani Mazurkiewicz, Irmine Loisel-Ferreira, Alexis M. Gautreau, Lionel Pintard, Xavier Jeunemaitre, Eric Clauser

Int J Mol Sci. 2022 May; 23(9): 5151. Published online 2022 May 5. doi: 10.3390/ijms23095151

PMCID:: PMC9105235

Abstract Article PDF–5.8M

Select item 90147117.

Quantitative Interaction Proteomics of Neurodegenerative Disease Proteins

Fabian Hosp, Hannes Vossfeldt, Matthias Heinig, Djordje Vasiljevic, Anup Arumughan, Emanuel Wyler, Genetic and Environmental Risk for Alzheimer’s Disease (GERAD1) Consortium, Markus Landthaler, Norbert Hubner, Erich E. Wanker, Lars Lannfelt, Martin Ingelsson, Maciej Lalowski, Aaron Voigt, Matthias Selbach

Cell Rep. Author manuscript; available in PMC 2022 Apr 18.

Published in final edited form as: Cell Rep. 2015 May 19; 11(7): 1134–1146. Published online 2015 May 7. doi: 10.1016/j.celrep.2015.04.030

PMCID:: PMC9014711

Abstract Article PDF–2.2M

Select item 81834128.

Loss of enteric neuronal Ndrg4 promotes colorectal cancer via increased release of Nid1 and Fbln2

Nathalie Vaes, Simone L Schonkeren, Glenn Rademakers, Amy M Holland, Alexander Koch, Marion J Gijbels, Tom G Keulers, Meike de Wit, Laura Moonen, Jaleesa R M Van der Meer, Edith van den Boezem, Tim G A M Wolfs, David W Threadgill, Jeroen Demmers, Remond J A Fijneman, Connie R Jimenez, Pieter Vanden Berghe, Kim M Smits, Kasper M A Rouschop, Werend Boesmans, Robert M W Hofstra, Veerle Melotte

EMBO Rep. 2021 Jun 4; 22(6): e51913. Published online 2021 Apr 23. doi: 10.15252/embr.202051913

PMCID:: PMC8183412

Abstract Article PDF–5.2M

Select item 81650309.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 807872810.

Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics

Alexandra Naba, Oliver M. T. Pearce, Amanda Del Rosario, Duanduan Ma, Huiming Ding, Vinothini Rajeeve, Pedro R. Cutillas, Frances R. Balkwill, Richard O. Hynes

J Proteome Res. Author manuscript; available in PMC 2021 Apr 27.

Published in final edited form as: J Proteome Res. 2017 Aug 4; 16(8): 3083–3091. Published online 2017 Jul 19. doi: 10.1021/acs.jproteome.7b00191

PMCID:: PMC8078728

Abstract Article PDF–2.1M

Select item 803489311.

Nidogen-1 expression is associated with overall survival and temozolomide sensitivity in low-grade glioma patients

Baiwei Zhang, Cheng Xu, Junfeng Liu, Jinsheng Yang, Qinglei Gao, Fei Ye

Aging (Albany NY) 2021 Mar 31; 13(6): 9085–9107. Published online 2021 Mar 18. doi: 10.18632/aging.202789

PMCID:: PMC8034893

Abstract Article PDF–3.1M

Select item 724408212.

MicroRNA-1298-3p inhibits proliferation and invasion of glioma cells by downregulating Nidogen-1

Xiaohe Xu, Yunchao Ban, Zilong Zhao, Qichen Pan, Jingyu Zou

Aging (Albany NY) 2020 May 15; 12(9): 7761–7773. Published online 2020 Apr 30. doi: 10.18632/aging.103087

PMCID:: PMC7244082

Abstract Article PDF–1.8M

Select item 677355613.

Proteomic Profiling of Paired Interstitial Fluids Reveals Dysregulated Pathways and Salivary NID1 as a Biomarker of Oral Cavity Squamous Cell Carcinoma

Chia-Wei Hsu, Kai-Ping Chang, Yenlin Huang, Hao-Ping Liu, Pei-Chun Hsueh, Po-Wen Gu, Wei-Chen Yen, Chih-Ching Wu

Mol Cell Proteomics. 2019 Oct; 18(10): 1939–1949. Published online 2019 Jul 17. doi: 10.1074/mcp.RA119.001654

PMCID:: PMC6773556

Abstract Article PDF–2.6M

Select item 644993514.

Endothelial cell-derived nidogen-1 inhibits migration of SK-BR-3 breast cancer cells

Daniela A. Ferraro, Francesca Patella, Sara Zanivan, Cinzia Donato, Nicola Aceto, Monica Giannotta, Elisabetta Dejana, Maren Diepenbruck, Gerhard Christofori, Martin Buess

BMC Cancer. 2019; 19: 312. Published online 2019 Apr 4. doi: 10.1186/s12885-019-5521-8

PMCID:: PMC6449935

Abstract Article PDF–1.6M

Select item 558892615.

Identification of Nidogen 1 as a lung metastasis protein through secretome analysis

Maša Alečković, Yong Wei, Gary LeRoy, Simone Sidoli, Daniel D. Liu, Benjamin A. Garcia, Yibin Kang

Genes Dev. 2017 Jul 15; 31(14): 1439–1455. doi: 10.1101/gad.301937.117

PMCID:: PMC5588926

Abstract Article PDF–8.9M

Select item 554841316.

A Human Tyrosine Phosphatase Interactome Mapped by Proteomic Profiling

Parveen Kumar, Prathyusha Munnangi, KVS Rammohan Chowdary, Varun J. Shah, Swapnil R. Shinde, Nanci R. Kolli, Rachita R. Halehalli, Hampapathalu A. Nagarajaram, Subbareddy Maddika

J Proteome Res. 2017 Aug 4; 16(8): 2789–2801. Published online 2017 Jul 4. doi: 10.1021/acs.jproteome.7b00065

PMCID:: PMC5548413

Abstract Article PDF–5.2M

Select item 553161117.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 552456118.

Differential protein expression and basal lamina remodeling in human heart failure

Evelyn H. Kim, Vladimir I. Galchev, Jin Young Kim, Sean A. Misek, Tamara K Stevenson, Matthew D. Campbell, Francis D. Pagani, Sharlene M. Day, T. Craig Johnson, Joseph G. Washburn, Karen L. Vikstrom, Daniel E. Michele, David E. Misek, Margaret V. Westfall

Proteomics Clin Appl. Author manuscript; available in PMC 2017 Jul 24.

Published in final edited form as: Proteomics Clin Appl. 2016 May; 10(5): 585–596. Published online 2016 Jan 25. doi: 10.1002/prca.201500099

PMCID:: PMC5524561

Abstract Article PDF–2.1M

Select item 546485419.

NID1, a new regulator of EMT required for metastasis and chemoresistance of ovarian cancer cells

Ya Zhou, Yuanyuan Zhu, Xiaoyan Fan, Chundong Zhang, Yitao Wang, Lian Zhang, Huan Zhang, Tao Wen, Kaina Zhang, Xiao Huo, Xue Jiang, Youquan Bu, Ying Zhang

Oncotarget. 2017 May 16; 8(20): 33110–33121. Published online 2017 Mar 13. doi: 10.18632/oncotarget.16145

PMCID:: PMC5464854

Abstract Article PDF–3.3M

Select item 539338620.

Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation

Marni S. Crow, Ileana M. Cristea

Mol Cell Proteomics. 2017 Apr; 16(4 Suppl 1): S200–S214. Published online 2017 Jan 11. doi: 10.1074/mcp.M116.064741

PMCID:: PMC5393386

Abstract Article PDF–2.6M

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PMC Links for GEO Profiles (Select 45805399) (43)
PMC
Epidermolysis Bullosa Simplex: epidermis
Epidermolysis Bullosa Simplex: epidermis
Accession: GDS4426

GEO DataSets
Related DataSets for GEO Profiles (Select 89753507) (1)
GEO DataSets
PREDICTED: Homo sapiens EBF family member 4 (EBF4), transcript variant X3, mRNA
PREDICTED: Homo sapiens EBF family member 4 (EBF4), transcript variant X3, mRNA
gi|1034625558|ref|XM_017027985.1|

Nucleotide
UI-R-BJ0p-afz-f-02-0-UI.s1 UI-R-BJ0p Rattus norvegicus cDNA clone UI-R-BJ0p-afz-...
UI-R-BJ0p-afz-f-02-0-UI.s1 UI-R-BJ0p Rattus norvegicus cDNA clone UI-R-BJ0p-afz-f-02-0-UI 3', mRNA sequence
gi|6966047|gnl|dbEST|3839400|gb|AW4 .1|

Nucleotide

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