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Select item 105517001.

Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability

Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai

Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108

PMCID:: PMC10551700

Abstract Article PDF–3.7M

Select item 98133922.

An essential Noc3p dimerization cycle mediates ORC double-hexamer formation in replication licensing

Aftab Amin, Rentian Wu, Muhammad Ajmal Khan, Man Hei Cheung, Yanting Liang, Changdong Liu, Guang Zhu, Zhi-Ling Yu, Chun Liang

Life Sci Alliance. 2023 Mar; 6(3): e202201594. Published online 2023 Jan 4. doi: 10.26508/lsa.202201594

PMCID:: PMC9813392

Abstract Article PDF–4.3M

Select item 96309863.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 92098114.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 81269235.

Phosphoproteomics reveals a distinctive Mec1/ATR signaling response upon DNA end hyper‐resection

Ethan J Sanford, William J Comstock, Vitor M Faça, Stephanie C Vega, Robert Gnügge, Lorraine S Symington, Marcus B Smolka

EMBO J. 2021 May 17; 40(10): e104566. Published online 2021 Mar 25. doi: 10.15252/embj.2020104566

PMCID:: PMC8126923

Abstract Article PDF–2.3M

Select item 80456876.

Interaction of replication factor Sld3 and histone acetyl transferase Esa1 alleviates gene silencing and promotes the activation of late and dormant replication origins

Seiji Tanaka

Genetics. 2021 Jan; 217(1): iyaa001. Published online 2020 Nov 11. doi: 10.1093/genetics/iyaa001

PMCID:: PMC8045687

Abstract Article PDF–873K

Select item 79545267.

DDK regulates replication initiation by controlling the multiplicity of Cdc45-GINS binding to Mcm2-7

Lorraine De Jesús-Kim, Larry J Friedman, Marko Lõoke, Christian K Ramsoomair, Jeff Gelles, Stephen P Bell

eLife. 2021; 10: e65471. Published online 2021 Feb 22. doi: 10.7554/eLife.65471

PMCID:: PMC7954526

Abstract Article PDF–3.6M

Select item 77187518.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 72289709.

DNA polymerase ε relies on a unique domain for efficient replisome assembly and strand synthesis

Xiangzhou Meng, Lei Wei, Sujan Devbhandari, Tuo Zhang, Jenny Xiang, Dirk Remus, Xiaolan Zhao

Nat Commun. 2020; 11: 2437. Published online 2020 May 15. doi: 10.1038/s41467-020-16095-x

PMCID:: PMC7228970

Abstract Article PDF–2.7M

Select item 721879810.

Mec1^ATR autophosphorylation and Ddc2^ATRIP phosphorylation regulates DNA damage checkpoint signaling

Gonen Memisoglu, Michael C. Lanz, Vinay V. Eapen, Jacqueline M. Jordan, Kihoon Lee, Marcus B. Smolka, James E. Haber

Cell Rep. Author manuscript; available in PMC 2020 May 13.

Published in final edited form as: Cell Rep. 2019 Jul 23; 28(4): 1090–1102.e3. doi: 10.1016/j.celrep.2019.06.068

PMCID:: PMC7218798

Abstract Article PDF–2.0M

Select item 682446311.

Checkpoint inhibition of origin firing prevents DNA topological stress

Esther C. Morafraile, Christine Hänni, George Allen, Theresa Zeisner, Caroline Clarke, Mark C. Johnson, Miguel M. Santos, Lauren Carroll, Nicola E. Minchell, Jonathan Baxter, Peter Banks, Dave Lydall, Philip Zegerman

Genes Dev. 2019 Nov 1; 33(21-22): 1539–1554. doi: 10.1101/gad.328682.119

PMCID:: PMC6824463

Abstract Article PDF–5.0M

Select item 671577412.

Network Rewiring of Homologous Recombination Enzymes during Mitotic Proliferation and Meiosis

Philipp Wild, Aitor Susperregui, Ilaria Piazza, Christian Dörig, Ashwini Oke, Meret Arter, Miyuki Yamaguchi, Alexander T. Hilditch, Karla Vuina, Ki Choi Chan, Tatiana Gromova, James E. Haber, Jennifer C. Fung, Paola Picotti, Joao Matos

Mol Cell. 2019 Aug 22; 75(4): 859–874.e4. doi: 10.1016/j.molcel.2019.06.022

PMCID:: PMC6715774

Abstract Article

Select item 621627713.

A role for Mog1 in H2Bub1 and H3K4me3 regulation affecting RNAPII transcription and mRNA export

Paula Oliete‐Calvo, Joan Serrano‐Quílez, Carme Nuño‐Cabanes, María E Pérez‐Martínez, Luis M Soares, Bernhard Dichtl, Stephen Buratowski, José E Pérez‐Ortín, Susana Rodríguez‐Navarro

EMBO Rep. 2018 Nov; 19(11): e45992. Published online 2018 Sep 24. doi: 10.15252/embr.201845992

PMCID:: PMC6216277

Abstract Article PDF–1.7M

Select item 589779214.

Investigating the role of Rts1 in DNA replication initiation

Ana B.A. Wallis, Conrad A. Nieduszynski

Version 1. Wellcome Open Res. 2018; 3: 23. Published online 2018 Mar 6. doi: 10.12688/wellcomeopenres.13884.1

PMCID:: PMC5897792

Abstract Article PDF–1.9M

Select item 579796615.

Rad9/53BP1 protects stalled replication forks from degradation in Mec1/ATR‐defective cells

Matteo Villa, Diego Bonetti, Massimo Carraro, Maria Pia Longhese

EMBO Rep. 2018 Feb; 19(2): 351–367. Published online 2018 Jan 4. doi: 10.15252/embr.201744910

PMCID:: PMC5797966

Abstract Article PDF–5.0M

Select item 576535916.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 568948017.

Exploring Quantitative Yeast Phenomics with Single Cell Analysis of DNA Damage Foci

Erin B. Styles, Karen J. Founk, Lee A. Zamparo, Tina L. Sing, Dogus Altintas, Cyril Ribeyre, Virginie Ribaud, Jacques Rougemont, David Mayhew, Michael Costanzo, Matej Usaj, Adrian J. Verster, Elizabeth N. Koch, Daniele Novarina, Marco Graf, Brian Luke, Marco Muzi-Falconi, Chad L. Myers, Robi David Mitra, David Shore, Grant W. Brown, Zhaolei Zhang, Charles Boone, Brenda J. Andrews

Cell Syst. Author manuscript; available in PMC 2017 Nov 16.

Published in final edited form as: Cell Syst. 2016 Sep 28; 3(3): 264–277.e10. Published online 2016 Sep 8. doi: 10.1016/j.cels.2016.08.008

PMCID:: PMC5689480

Abstract Article PDF–2.9M

Select item 566188518.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 562383519.

Pre‐initiation complex assembly functions as a molecular switch that splits the Mcm2‐7 double hexamer

Mayumi Miyazawa‐Onami, Hiroyuki Araki, Seiji Tanaka

EMBO Rep. 2017 Oct; 18(10): 1752–1761. Published online 2017 Aug 17. doi: 10.15252/embr.201744206

PMCID:: PMC5623835

Abstract Article PDF–944K

Select item 559968420.

A cell cycle-independent mode of the Rad9-Dpb11 interaction is induced by DNA damage

Giulia di Cicco, Susanne C. S. Bantele, Karl-Uwe Reusswig, Boris Pfander

Sci Rep. 2017; 7: 11650. Published online 2017 Sep 14. doi: 10.1038/s41598-017-11937-z

PMCID:: PMC5599684

Abstract Article PDF–3.7M

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