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Items: 1 to 20 of 32

1.
Interaction network of human early embryonic transcription factors
Lisa Gawriyski, Zenglai Tan, Xiaonan Liu, Iftekhar Chowdhury, Dicle Malaymar Pinar, Qin Zhang, Jere Weltner, Eeva-Mari Jouhilahti, Gong-Hong Wei, Juha Kere, Markku Varjosalo
EMBO Rep. 2024 Mar; 25(3): 1589–1622. Published online 2024 Jan 31. doi: 10.1038/s44319-024-00074-0
PMCID:
PMC10933267
AbstractArticlePDF–2.9M
2.
Chr21 protein–protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer’s disease
Julia Viard, Yann Loe-Mie, Rachel Daudin, Malik Khelfaoui, Christine Plancon, Anne Boland, Francisco Tejedor, Richard L Huganir, Eunjoon Kim, Makoto Kinoshita, Guofa Liu, Volker Haucke, Thomas Moncion, Eugene Yu, Valérie Hindie, Henri Bléhaut, Clotilde Mircher, Yann Herault, Jean-François Deleuze, Jean-Christophe Rain, Michel Simonneau, Aude-Marie Lepagnol-Bestel
Life Sci Alliance. 2022 Dec; 5(12): e202101205. Published online 2022 Aug 1. doi: 10.26508/lsa.202101205
PMCID:
PMC9348576
AbstractArticlePDF–3.0M
3.
OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization
Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti
Science. Author manuscript; available in PMC 2022 Sep 11.
Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983
PMCID:
PMC9119736
AbstractArticlePDF–3.3M
4.
Expression of the preadipocyte marker ZFP423 is dysregulated between well-differentiated and dedifferentiated liposarcoma
Thanh N. Dang, Rafael P. Tiongco, Loren M. Brown, Jessica L. Taylor, John M. Lyons, Frank H. Lau, Z. Elizabeth Floyd
BMC Cancer. 2022; 22: 300. Published online 2022 Mar 21. doi: 10.1186/s12885-022-09379-6
PMCID:
PMC8939188
AbstractArticlePDF–3.7M
5.
Transcription Factor Protein Interactomes Reveal Genetic Determinants in Heart Disease
Barbara Gonzalez-Teran, Maureen Pittman, Franco Felix, Reuben Thomas, Desmond Richmond-Buccola, Ruth Hüttenhain, Krishna Choudhary, Elisabetta Moroni, Mauro W. Costa, Yu Huang, Arun Padmanabhan, Michael Alexanian, Clara Youngna Lee, Bonnie E. J. Maven, Kaitlen Samse-Knapp, Sarah U. Morton, Michael McGregor, Casey A. Gifford, J. G. Seidman, Christine E. Seidman, Bruce D. Gelb, Giorgio Colombo, Bruce R. Conklin, Brian L. Black, Benoit G. Bruneau, Nevan J. Krogan, Katherine S. Pollard, Deepak Srivastava
Cell. Author manuscript; available in PMC 2023 Mar 3.
Published in final edited form as: Cell. 2022 Mar 3; 185(5): 794–814.e30. Published online 2022 Feb 18. doi: 10.1016/j.cell.2022.01.021
PMCID:
PMC8923057
AbstractArticlePDF–2.5M
6.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
7.
ZNF423 patient variants, truncations, and in-frame deletions in mice define an allele-dependent range of midline brain abnormalities
Ojas Deshpande, Raquel Z. Lara, Oliver R. Zhang, Dorothy Concepcion, Bruce A. Hamilton
PLoS Genet. 2020 Sep; 16(9): e1009017. Published online 2020 Sep 14. doi: 10.1371/journal.pgen.1009017
PMCID:
PMC7515201
AbstractArticlePDF–5.0M
8.
Kinase Interaction Network Expands Functional and Disease Roles of Human Kinases
Marija Buljan, Rodolfo Ciuffa, Audrey van Drogen, Anton Vichalkovski, Martin Mehnert, George Rosenberger, Sohyon Lee, Markku Varjosalo, Lucia Espona Pernas, Vincent Spegg, Berend Snijder, Ruedi Aebersold, Matthias Gstaiger
Mol Cell. 2020 Aug 6; 79(3): 504–520.e9. doi: 10.1016/j.molcel.2020.07.001
PMCID:
PMC7427327
AbstractArticle
9.
Roles of Zinc Finger Protein 423 in Proliferation and Invasion of Cholangiocarcinoma through Oxidative Stress
Timpika Chaiprasert, Napat Armartmuntree, Anchalee Techasen, Chadamas Sakonsinsiri, Somchai Pinlaor, Piti Ungarreevittaya, Narong Khuntikeo, Nisana Namwat, Raynoo Thanan
Biomolecules. 2019 Jul; 9(7): 263. Published online 2019 Jul 7. doi: 10.3390/biom9070263
PMCID:
PMC6681239
AbstractArticlePDF–2.1M
10.
Gene-based analysis in HRC imputed genome wide association data identifies three novel genes for Alzheimer’s disease
Emily Baker, Rebecca Sims, Ganna Leonenko, Aura Frizzati, Janet C. Harwood, Detelina Grozeva, GERAD/PERADES, CHARGE, ADGC, EADI, IGAP consortia, Kevin Morgan, Peter Passmore, Clive Holmes, John Powell, Carol Brayne, Michael Gill, Simon Mead, Paola Bossù, Gianfranco Spalletta, Alison M. Goate, Carlos Cruchaga, Wolfgang Maier, Reinhard Heun, Frank Jessen, Oliver Peters, Martin Dichgans, Lutz FröLich, Alfredo Ramirez, Lesley Jones, John Hardy, Dobril Ivanov, Matthew Hill, Peter Holmans, Nicholas D. Allen, B. Paul Morgan, Sudha Seshadri, Gerard D. Schellenberg, Philippe Amouyel, Julie Williams, Valentina Escott-Price
PLoS One. 2019; 14(7): e0218111. Published online 2019 Jul 8. doi: 10.1371/journal.pone.0218111
PMCID:
PMC6613773
AbstractArticlePDF–885K
11.
Cloning and Functional Characterization of Roaz, a Zinc Finger Protein that Interacts with O/E-1 to Regulate Gene Expression: Implications for Olfactory Neuronal Development
Robert Y. L. Tsai, Randall R. Reed
J Neurosci. 1997 Jun 1; 17(11): 4159–4169. doi: 10.1523/JNEUROSCI.17-11-04159.1997
PMCID:
PMC6573535
AbstractArticlePDF–841K
12.
SNPs near the cysteine proteinase cathepsin O gene (CTSO) determine tamoxifen sensitivity in ERα-positive breast cancer through regulation of BRCA1
Junmei Cairns, James N. Ingle, Lawrence D. Wickerham, Richard Weinshilboum, Mohan Liu, Liewei Wang
PLoS Genet. 2017 Oct; 13(10): e1007031. Published online 2017 Oct 2. doi: 10.1371/journal.pgen.1007031
PMCID:
PMC5638617
AbstractArticlePDF–5.6M
13.
Calmodulin-like protein 3 is an estrogen receptor alpha coregulator for gene expression and drug response in a SNP, estrogen, and SERM-dependent fashion
Sisi Qin, James N. Ingle, Mohan Liu, Jia Yu, D. Lawrence Wickerham, Michiaki Kubo, Richard M. Weinshilboum, Liewei Wang
Breast Cancer Res. 2017; 19: 95. Published online 2017 Aug 18. doi: 10.1186/s13058-017-0890-x
PMCID:
PMC5562991
AbstractArticlePDF–2.5M
14.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
15.
Zfp423 Maintains White Adipocyte Identity through Suppression of the Beige Cell Thermogenic Gene Program
Mengle Shao, Jeff Ishibashi, Christine M. Kusminski, Qiong A. Wang, Chelsea Hepler, Lavanya Vishvanath, Karen A. MacPherson, Stephen B. Spurgin, Kai Sun, William L. Holland, Patrick Seale, Rana K. Gupta
Cell Metab. Author manuscript; available in PMC 2017 Jun 14.
Published in final edited form as: Cell Metab. 2016 Jun 14; 23(6): 1167–1184. Published online 2016 May 26. doi: 10.1016/j.cmet.2016.04.023
PMCID:
PMC5091077
AbstractArticlePDF–2.1M
16.
Zfp423 Regulates Sonic Hedgehog Signaling via Primary Cilium Function
Chen-Jei Hong, Bruce A. Hamilton
PLoS Genet. 2016 Oct; 12(10): e1006357. Published online 2016 Oct 11. doi: 10.1371/journal.pgen.1006357
PMCID:
PMC5065120
AbstractArticlePDF–2.4M
17.
ZNF423 and ZNF521: EBF1 Antagonists of Potential Relevance in B-Lymphoid Malignancies
Maria Mesuraca, Emanuela Chiarella, Stefania Scicchitano, Bruna Codispoti, Marco Giordano, Giovanna Nappo, Heather M. Bond, Giovanni Morrone
Biomed Res Int. 2015; 2015: 165238. Published online 2015 Dec 16. doi: 10.1155/2015/165238
PMCID:
PMC4695665
AbstractArticlePDF–702K
18.
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2016 Jul 16.
Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043
PMCID:
PMC4617211
AbstractArticlePDF–2.2M
19.
Systematic screening reveals a role for BRCA1 in the response to transcription-associated DNA damage
Sarah J. Hill, Thomas Rolland, Guillaume Adelmant, Xianfang Xia, Matthew S. Owen, Amélie Dricot, Travis I. Zack, Nidhi Sahni, Yves Jacob, Tong Hao, Kristine M. McKinney, Allison P. Clark, Deepak Reyon, Shengdar Q. Tsai, J. Keith Joung, Rameen Beroukhim, Jarrod A. Marto, Marc Vidal, Suzanne Gaudet, David E. Hill, David M. Livingston
Genes Dev. 2014 Sep 1; 28(17): 1957–1975. doi: 10.1101/gad.241620.114
PMCID:
PMC4197947
AbstractArticlePDF–2.4M
20.
Identification of a recurrent transforming UBR5–ZNF423 fusion gene in EBV-associated nasopharyngeal carcinoma
Grace TY Chung, Raymond WM Lung, Angela BY Hui, Kevin YL Yip, John KS Woo, Chit Chow, Carol YK Tong, Sau-Dan Lee, Jessie WF Yuen, Samantha WM Lun, Ken KY Tso, Nathalie Wong, Sai-Wah Tsao, Timothy TC Yip, Pierre Busson, Hyungtae Kim, Jeong-Sun Seo, Brian O'Sullivan, Fei-Fei Liu, Ka-Fai To, Kwok-Wai Lo
J Pathol. 2013 Oct; 231(2): 158–167. Published online 2013 Sep 10. doi: 10.1002/path.4240
PMCID:
PMC4166696
AbstractArticlePDF–746K

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